RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 GPR98Q8WXG9 6306 aa9.61□□□□□ -0.87
CAPNS1-216ENST00000628306 TNP1P09430 55 aa9.6□□□□□ -0.87
CAPNS1-216ENST00000628306 KRTAP10-7P60409 375 aaPredicted RBP9.58□□□□□ -0.88
CAPNS1-216ENST00000628306 PRAC1Q96KF2 57 aa9.56□□□□□ -0.88
CAPNS1-216ENST00000628306 KRTAP10-12P60413 245 aa9.52□□□□□ -0.88
CAPNS1-216ENST00000628306 KRTAP23-1A1A580 65 aa9.48□□□□□ -0.89
CAPNS1-216ENST00000628306 PP632Q6XCG6 107 aa9.39□□□□□ -0.91
CAPNS1-216ENST00000628306 DSTQ03001 7570 aaKnown RBP9.39□□□□□ -0.91
CAPNS1-216ENST00000628306 KRTAP4-9Q9BYQ8 210 aa9.21□□□□□ -0.94
CAPNS1-216ENST00000628306 LCE3AQ5TA76 89 aa9.1□□□□□ -0.95
CAPNS1-216ENST00000628306 LCE5AQ5TCM9 118 aa9.1□□□□□ -0.95
CAPNS1-216ENST00000628306 KRTAP19-7Q3SYF9 63 aa9.01□□□□□ -0.97
CAPNS1-216ENST00000628306 KRTAP19-3Q7Z4W3 81 aa8.95□□□□□ -0.98
CAPNS1-216ENST00000628306 MT1EP04732 61 aa8.94□□□□□ -0.98
CAPNS1-216ENST00000628306 LCE1DQ5T752 114 aa8.93□□□□□ -0.98
CAPNS1-216ENST00000628306 HMCN1Q96RW7 5635 aa8.91□□□□□ -0.98
CAPNS1-216ENST00000628306 AHNAK2Q8IVF2 5795 aa8.83□□□□□ -1
CAPNS1-216ENST00000628306 KRTAP12-3P60328 96 aa8.81□□□□□ -1
CAPNS1-216ENST00000628306 KRTAP19-5Q3LI72 72 aa8.73□□□□□ -1.01
CAPNS1-216ENST00000628306 LCE4AQ5TA78 99 aa8.71□□□□□ -1.02
CAPNS1-216ENST00000628306 MT4P47944 62 aa8.7□□□□□ -1.02
CAPNS1-216ENST00000628306 KRTAP15-1Q3LI76 137 aa8.66□□□□□ -1.02
CAPNS1-216ENST00000628306 MT1GP13640 62 aa8.65□□□□□ -1.02
CAPNS1-216ENST00000628306 KRTAP5-10Q6L8G5 202 aa8.63□□□□□ -1.03
CAPNS1-216ENST00000628306 KRTAP19-4Q3LI73 84 aa8.55□□□□□ -1.04
CAPNS1-216ENST00000628306 KRTAP5-4Q6L8H1 288 aa8.54□□□□□ -1.04
CAPNS1-216ENST00000628306 MT1MQ8N339 61 aa8.54□□□□□ -1.04
CAPNS1-216ENST00000628306 KRTAP4-6Q9BYQ5 205 aa8.48□□□□□ -1.05
CAPNS1-216ENST00000628306 MT1LQ93083 61 aa8.44□□□□□ -1.06
CAPNS1-216ENST00000628306 KRTAP4-3Q9BYR4 195 aa8.41□□□□□ -1.06
CAPNS1-216ENST00000628306 KRTAP5-7Q6L8G8 165 aa8.35□□□□□ -1.07
CAPNS1-216ENST00000628306 SPRR5A0A1B0GTR4 108 aa8.29□□□□□ -1.08
CAPNS1-216ENST00000628306 KRTAP5-3Q6L8H2 238 aa8.27□□□□□ -1.09
CAPNS1-216ENST00000628306 LCE3CQ5T5A8 94 aa8.24□□□□□ -1.09
CAPNS1-216ENST00000628306 KRTAP20-2Q3LI61 65 aa8.07□□□□□ -1.12
CAPNS1-216ENST00000628306 KRTAP4-7Q9BYR0 210 aa8.04□□□□□ -1.12
CAPNS1-216ENST00000628306 KRTAP5-5Q701N2 237 aaPredicted RBP7.96□□□□□ -1.14
CAPNS1-216ENST00000628306 LUZP6Q538Z0 58 aa7.94□□□□□ -1.14
CAPNS1-216ENST00000628306 SYNE1Q8NF91 8797 aaKnown RBP7.8□□□□□ -1.16
CAPNS1-216ENST00000628306 KRTAP12-4P60329 112 aa7.72□□□□□ -1.17
CAPNS1-216ENST00000628306 KRTAP9-6A8MVA2 160 aa7.71□□□□□ -1.17
CAPNS1-216ENST00000628306 LOC100996750A0A140TA64 210 aa7.64□□□□□ -1.19
CAPNS1-216ENST00000628306 NDUFAF8A1L188 74 aa7.61□□□□□ -1.19
CAPNS1-216ENST00000628306 KRTAP4-11Q9BYQ6 195 aa7.49□□□□□ -1.21
CAPNS1-216ENST00000628306 KRTAP5-2Q701N4 177 aa7.39□□□□□ -1.23
CAPNS1-216ENST00000628306 AHNAKQ09666 5890 aaKnown RBP7.39□□□□□ -1.23
CAPNS1-216ENST00000628306 MUC5ACP98088 5654 aa7.34□□□□□ -1.23
CAPNS1-216ENST00000628306 MUC5BQ9HC84 5762 aaPredicted RBP7.33□□□□□ -1.24
CAPNS1-216ENST00000628306 KRTAP5-8O75690 187 aa7.3□□□□□ -1.24
CAPNS1-216ENST00000628306 KRTAP6-1Q3LI64 71 aa7.19□□□□□ -1.26
CAPNS1-216ENST00000628306 MT1AP04731 61 aa7.15□□□□□ -1.26
CAPNS1-216ENST00000628306 OBSCNQ5VST9 7968 aa7.07□□□□□ -1.28
CAPNS1-216ENST00000628306 KRTAP9-4Q9BYQ2 154 aa6.97□□□□□ -1.29
CAPNS1-216ENST00000628306 KRTAP6-2Q3LI66 62 aa6.95□□□□□ -1.3
CAPNS1-216ENST00000628306 KRTAP9-9Q9BYP9 154 aa6.92□□□□□ -1.3
CAPNS1-216ENST00000628306 A0A0A0MQY5 61 aa6.79□□□□□ -1.32
CAPNS1-216ENST00000628306 KRTAP5-1Q6L8H4 278 aa6.74□□□□□ -1.33
CAPNS1-216ENST00000628306 H3BS24 57 aa6.54□□□□□ -1.36
CAPNS1-216ENST00000628306 MT3P25713 68 aa6.51□□□□□ -1.37
CAPNS1-216ENST00000628306 INE1O15225 51 aa6.45□□□□□ -1.38
CAPNS1-216ENST00000628306 LCE3DQ9BYE3 92 aa6.18□□□□□ -1.42
CAPNS1-216ENST00000628306 LCE1EQ5T753 118 aa6.16□□□□□ -1.42
CAPNS1-216ENST00000628306 LCE3EQ5T5B0 92 aa6.03□□□□□ -1.44
CAPNS1-216ENST00000628306 KRTAP4-2Q9BYR5 136 aa5.96□□□□□ -1.45
CAPNS1-216ENST00000628306 LCE1BQ5T7P3 118 aa5.81□□□□□ -1.48
CAPNS1-216ENST00000628306 LCE1CQ5T751 118 aa5.73□□□□□ -1.49
CAPNS1-216ENST00000628306 KRTAP4-12Q9BQ66 201 aa5.57□□□□□ -1.52
CAPNS1-216ENST00000628306 KRTAP5-11Q6L8G4 156 aa5.33□□□□□ -1.56
CAPNS1-216ENST00000628306 LCE1FQ5T754 118 aa5.21□□□□□ -1.58
CAPNS1-216ENST00000628306 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.17□□□□□ -1.58
CAPNS1-216ENST00000628306 PRM1P04553 51 aa5.15□□□□□ -1.59
CAPNS1-216ENST00000628306 PHGR1C9JFL3 82 aa4.98□□□□□ -1.61
CAPNS1-216ENST00000628306 KRTAP21-2Q3LI59 83 aa4.77□□□□□ -1.65
CAPNS1-216ENST00000628306 KRTAP4-4Q9BYR3 166 aa4.42□□□□□ -1.7
CAPNS1-216ENST00000628306 MUC19Q7Z5P9 8384 aa4.4□□□□□ -1.7
CAPNS1-216ENST00000628306 KRTAP21-1Q3LI58 79 aa3.78□□□□□ -1.8
CAPNS1-216ENST00000628306 MUC16Q8WXI7 14507 aa3.14□□□□□ -1.91
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms