RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
LINC00963-217ENST00000624009 LCE4AQ5TA78 99 aa4.57□□□□□ -1.68
LINC00963-217ENST00000624009 TNP1P09430 55 aa4.55□□□□□ -1.68
LINC00963-217ENST00000624009 UQCR11O14957 56 aa4.54□□□□□ -1.68
LINC00963-217ENST00000624009 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
LINC00963-217ENST00000624009 MT1GP13640 62 aa4.53□□□□□ -1.68
LINC00963-217ENST00000624009 C10orf95Q9H7T3 257 aa4.53□□□□□ -1.68
LINC00963-217ENST00000624009 DSTQ03001 7570 aaKnown RBP4.52□□□□□ -1.69
LINC00963-217ENST00000624009 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
LINC00963-217ENST00000624009 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
LINC00963-217ENST00000624009 KRTAP5-3Q6L8H2 238 aa4.45□□□□□ -1.7
LINC00963-217ENST00000624009 MT1LQ93083 61 aa4.44□□□□□ -1.7
LINC00963-217ENST00000624009 V9GYY9 64 aa4.44□□□□□ -1.7
LINC00963-217ENST00000624009 MIR22HGQ0VDD5 57 aa4.4□□□□□ -1.71
LINC00963-217ENST00000624009 MT1MQ8N339 61 aa4.4□□□□□ -1.71
LINC00963-217ENST00000624009 Q1T7F1 81 aa4.38□□□□□ -1.71
LINC00963-217ENST00000624009 K7ERS5 55 aa4.36□□□□□ -1.71
LINC00963-217ENST00000624009 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
LINC00963-217ENST00000624009 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
LINC00963-217ENST00000624009 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
LINC00963-217ENST00000624009 PSPHP1O15172 72 aa4.3□□□□□ -1.72
LINC00963-217ENST00000624009 HMCN1Q96RW7 5635 aa4.23□□□□□ -1.73
LINC00963-217ENST00000624009 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
LINC00963-217ENST00000624009 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
LINC00963-217ENST00000624009 RPS28P62857 69 aaKnown RBP4.2□□□□□ -1.74
LINC00963-217ENST00000624009 A6NED7 52 aa4.18□□□□□ -1.74
LINC00963-217ENST00000624009 GPR98Q8WXG9 6306 aa4.17□□□□□ -1.74
LINC00963-217ENST00000624009 MT4P47944 62 aa4.12□□□□□ -1.75
LINC00963-217ENST00000624009 CDC42SE1Q9NRR8 79 aa4.12□□□□□ -1.75
LINC00963-217ENST00000624009 PCP4P48539 62 aa4.07□□□□□ -1.76
LINC00963-217ENST00000624009 KRTAP15-1Q3LI76 137 aa4.07□□□□□ -1.76
LINC00963-217ENST00000624009 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
LINC00963-217ENST00000624009 ROMO1P60602 79 aa4.04□□□□□ -1.76
LINC00963-217ENST00000624009 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
LINC00963-217ENST00000624009 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
LINC00963-217ENST00000624009 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
LINC00963-217ENST00000624009 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
LINC00963-217ENST00000624009 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
LINC00963-217ENST00000624009 KRTAP5-10Q6L8G5 202 aa3.93□□□□□ -1.78
LINC00963-217ENST00000624009 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
LINC00963-217ENST00000624009 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
LINC00963-217ENST00000624009 MT1AP04731 61 aa3.79□□□□□ -1.8
LINC00963-217ENST00000624009 KRTAP5-7Q6L8G8 165 aa3.79□□□□□ -1.8
LINC00963-217ENST00000624009 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
LINC00963-217ENST00000624009 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
LINC00963-217ENST00000624009 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
LINC00963-217ENST00000624009 BRK1Q8WUW1 75 aa3.6□□□□□ -1.83
LINC00963-217ENST00000624009 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
LINC00963-217ENST00000624009 MT3P25713 68 aa3.48□□□□□ -1.85
LINC00963-217ENST00000624009 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
LINC00963-217ENST00000624009 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
LINC00963-217ENST00000624009 PMAIP1Q13794 54 aa3.41□□□□□ -1.86
LINC00963-217ENST00000624009 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
LINC00963-217ENST00000624009 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
LINC00963-217ENST00000624009 AHNAKQ09666 5890 aaKnown RBP3.3□□□□□ -1.88
LINC00963-217ENST00000624009 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
LINC00963-217ENST00000624009 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
LINC00963-217ENST00000624009 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
LINC00963-217ENST00000624009 PRAC1Q96KF2 57 aa3.23□□□□□ -1.89
LINC00963-217ENST00000624009 PRO0628Q9UI54 55 aa3.2□□□□□ -1.9
LINC00963-217ENST00000624009 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
LINC00963-217ENST00000624009 KTN1-AS1Q86SY8 53 aa3.05□□□□□ -1.92
LINC00963-217ENST00000624009 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
LINC00963-217ENST00000624009 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
LINC00963-217ENST00000624009 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
LINC00963-217ENST00000624009 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
LINC00963-217ENST00000624009 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
LINC00963-217ENST00000624009 LUZP6Q538Z0 58 aa2.81□□□□□ -1.96
LINC00963-217ENST00000624009 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
LINC00963-217ENST00000624009 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
LINC00963-217ENST00000624009 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
LINC00963-217ENST00000624009 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
LINC00963-217ENST00000624009 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
LINC00963-217ENST00000624009 PRM1P04553 51 aa2.02□□□□□ -2.09
LINC00963-217ENST00000624009 INE1O15225 51 aa1.84□□□□□ -2.11
LINC00963-217ENST00000624009 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
LINC00963-217ENST00000624009 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 112 ms