RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, human

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-223	ENST00000622098	KRTAP19-6	Q3LI70	58 aa		5.93	□□□□□ -1.46
CDK16-223	ENST00000622098	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.86	□□□□□ -1.47
CDK16-223	ENST00000622098	KRTAP4-3	Q9BYR4	195 aa		5.83	□□□□□ -1.48
CDK16-223	ENST00000622098	MUC12	Q9UKN1	5478 aa		5.83	□□□□□ -1.48
CDK16-223	ENST00000622098	LOC100996750	A0A140TA64	210 aa		5.82	□□□□□ -1.48
CDK16-223	ENST00000622098	MT1G	P13640	62 aa		5.76	□□□□□ -1.49
CDK16-223	ENST00000622098	MT1M	Q8N339	61 aa		5.71	□□□□□ -1.5
CDK16-223	ENST00000622098	KRTAP19-3	Q7Z4W3	81 aa		5.7	□□□□□ -1.5
CDK16-223	ENST00000622098	CRCT1	Q9UGL9	99 aa		5.67	□□□□□ -1.5
CDK16-223	ENST00000622098	KRTAP9-2	Q9BYQ4	174 aa		5.62	□□□□□ -1.51
CDK16-223	ENST00000622098	DST	Q03001	7570 aa	Known RBP	5.58	□□□□□ -1.52
CDK16-223	ENST00000622098	SPRR2F	Q96RM1	72 aa		5.5	□□□□□ -1.53
CDK16-223	ENST00000622098	LCE5A	Q5TCM9	118 aa		5.49	□□□□□ -1.53
CDK16-223	ENST00000622098	KRTAP9-6	A0A140TA67	174 aa		5.48	□□□□□ -1.53
CDK16-223	ENST00000622098	KRTAP12-4	P60329	112 aa		5.42	□□□□□ -1.54
CDK16-223	ENST00000622098	KRTAP4-6	Q9BYQ5	205 aa		5.38	□□□□□ -1.55
CDK16-223	ENST00000622098	MACF1	Q9UPN3	7388 aa	Known RBP	5.38	□□□□□ -1.55
CDK16-223	ENST00000622098	LCE3B	Q5TA77	95 aa		5.35	□□□□□ -1.55
CDK16-223	ENST00000622098	MDN1	Q9NU22	5596 aa		5.27	□□□□□ -1.57
CDK16-223	ENST00000622098	KRTAP4-9	Q9BYQ8	210 aa		5.26	□□□□□ -1.57
CDK16-223	ENST00000622098	SYNE2	Q8WXH0	6885 aa	Known RBP	5.23	□□□□□ -1.57
CDK16-223	ENST00000622098	KRTAP6-1	Q3LI64	71 aa		5.21	□□□□□ -1.58
CDK16-223	ENST00000622098	SYNE1	Q8NF91	8797 aa	Known RBP	5.2	□□□□□ -1.58
CDK16-223	ENST00000622098	MT1A	P04731	61 aa		5.13	□□□□□ -1.59
CDK16-223	ENST00000622098	LCE1A	Q5T7P2	110 aa		5.08	□□□□□ -1.6
CDK16-223	ENST00000622098	KRTAP4-12	Q9BQ66	201 aa		5.05	□□□□□ -1.6
CDK16-223	ENST00000622098	LCE3D	Q9BYE3	92 aa		5.04	□□□□□ -1.6
CDK16-223	ENST00000622098	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.01	□□□□□ -1.61
CDK16-223	ENST00000622098	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.01	□□□□□ -1.61
CDK16-223	ENST00000622098	KRTAP5-9	P26371	169 aa		5.01	□□□□□ -1.61
CDK16-223	ENST00000622098	LCE3E	Q5T5B0	92 aa		4.96	□□□□□ -1.61
CDK16-223	ENST00000622098	SPRR2E	P22531	72 aa		4.96	□□□□□ -1.62
CDK16-223	ENST00000622098	SPRR2B	P35325	72 aa		4.96	□□□□□ -1.62
CDK16-223	ENST00000622098	SPRR2A	P35326	72 aa		4.96	□□□□□ -1.62
CDK16-223	ENST00000622098	KRTAP6-3	Q3LI67	103 aa		4.92	□□□□□ -1.62
CDK16-223	ENST00000622098	KRTAP9-7	A8MTY7	169 aa		4.89	□□□□□ -1.63
CDK16-223	ENST00000622098	LCE4A	Q5TA78	99 aa		4.88	□□□□□ -1.63
CDK16-223	ENST00000622098	KRTAP9-4	Q9BYQ2	154 aa		4.81	□□□□□ -1.64
CDK16-223	ENST00000622098	PRM1	P04553	51 aa		4.8	□□□□□ -1.64
CDK16-223	ENST00000622098	KRTAP9-9	Q9BYP9	154 aa		4.77	□□□□□ -1.65
CDK16-223	ENST00000622098	SPRR2D	P22532	72 aa		4.74	□□□□□ -1.65
CDK16-223	ENST00000622098	OBSCN	Q5VST9	7968 aa		4.72	□□□□□ -1.65
CDK16-223	ENST00000622098	KRTAP6-2	Q3LI66	62 aa		4.67	□□□□□ -1.66
CDK16-223	ENST00000622098	MT3	P25713	68 aa		4.6	□□□□□ -1.67
CDK16-223	ENST00000622098	LCE1D	Q5T752	114 aa		4.55	□□□□□ -1.68
CDK16-223	ENST00000622098	NEB	P20929	6669 aa		4.43	□□□□□ -1.7
CDK16-223	ENST00000622098	KRTAP20-1	Q3LI63	56 aa		4.4	□□□□□ -1.71
CDK16-223	ENST00000622098	KRTAP5-4	Q6L8H1	288 aa		4.35	□□□□□ -1.71
CDK16-223	ENST00000622098	KRTAP4-11	Q9BYQ6	195 aa		4.29	□□□□□ -1.72
CDK16-223	ENST00000622098	KRTAP4-2	Q9BYR5	136 aa		4.23	□□□□□ -1.73
CDK16-223	ENST00000622098	KRTAP2-2	Q9BYT5	123 aa		4.23	□□□□□ -1.73
CDK16-223	ENST00000622098	MT4	P47944	62 aa		4.21	□□□□□ -1.74
CDK16-223	ENST00000622098	KRTAP20-2	Q3LI61	65 aa		4.12	□□□□□ -1.75
CDK16-223	ENST00000622098	KRTAP5-2	Q701N4	177 aa		4.09	□□□□□ -1.75
CDK16-223	ENST00000622098	HMCN1	Q96RW7	5635 aa		4.05	□□□□□ -1.76
CDK16-223	ENST00000622098	MUC5AC	P98088	5654 aa		3.95	□□□□□ -1.78
CDK16-223	ENST00000622098	KRTAP5-3	Q6L8H2	238 aa		3.9	□□□□□ -1.79
CDK16-223	ENST00000622098	LCE1E	Q5T753	118 aa		3.88	□□□□□ -1.79
CDK16-223	ENST00000622098	LCE1B	Q5T7P3	118 aa		3.75	□□□□□ -1.81
CDK16-223	ENST00000622098	KRTAP5-10	Q6L8G5	202 aa		3.66	□□□□□ -1.82
CDK16-223	ENST00000622098	KRTAP5-1	Q6L8H4	278 aa		3.6	□□□□□ -1.83
CDK16-223	ENST00000622098	LCE1C	Q5T751	118 aa		3.53	□□□□□ -1.84
CDK16-223	ENST00000622098	KRTAP5-7	Q6L8G8	165 aa		3.45	□□□□□ -1.86
CDK16-223	ENST00000622098	AHNAK2	Q8IVF2	5795 aa		3.45	□□□□□ -1.86
CDK16-223	ENST00000622098	LCE1F	Q5T754	118 aa		3.44	□□□□□ -1.86
CDK16-223	ENST00000622098	GPR98	Q8WXG9	6306 aa		3.43	□□□□□ -1.86
CDK16-223	ENST00000622098	KRTAP21-2	Q3LI59	83 aa		3.35	□□□□□ -1.87
CDK16-223	ENST00000622098	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.31	□□□□□ -1.88
CDK16-223	ENST00000622098	MUC19	Q7Z5P9	8384 aa		3.23	□□□□□ -1.89
CDK16-223	ENST00000622098	KRTAP5-8	O75690	187 aa		3.22	□□□□□ -1.89
CDK16-223	ENST00000622098	KRTAP4-4	Q9BYR3	166 aa		3.11	□□□□□ -1.91
CDK16-223	ENST00000622098	AHNAK	Q09666	5890 aa	Known RBP	3.05	□□□□□ -1.92
CDK16-223	ENST00000622098	KRTAP5-11	Q6L8G4	156 aa		3.01	□□□□□ -1.93
CDK16-223	ENST00000622098	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.01	□□□□□ -1.93
CDK16-223	ENST00000622098	KRTAP21-1	Q3LI58	79 aa		2.99	□□□□□ -1.93
CDK16-223	ENST00000622098	PHGR1	C9JFL3	82 aa		2.62	□□□□□ -1.99
CDK16-223	ENST00000622098	MUC16	Q8WXI7	14507 aa		1.74	□□□□□ -2.13

Retrieved 77 of 20,778 RNA–protein pairs in 13.6 ms