RNA–Protein interactions for RNA: ENST00000621161.4

RAB11FIP4-211, Transcript of RAB11 family interacting protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11FIP4, Length 8,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-211ENST00000621161 KRTAP19-6Q3LI70 58 aa5.68□□□□□ -1.5
RAB11FIP4-211ENST00000621161 HERC2O95714 4834 aa5.64□□□□□ -1.51
RAB11FIP4-211ENST00000621161 LCE1CQ5T751 118 aa5.61□□□□□ -1.51
RAB11FIP4-211ENST00000621161 LCE1EQ5T753 118 aa5.61□□□□□ -1.51
RAB11FIP4-211ENST00000621161 LCE1FQ5T754 118 aa5.61□□□□□ -1.51
RAB11FIP4-211ENST00000621161 LCE1AQ5T7P2 110 aa5.61□□□□□ -1.51
RAB11FIP4-211ENST00000621161 KRTAP2-3P0C7H8 128 aa5.54□□□□□ -1.52
RAB11FIP4-211ENST00000621161 KRTAP2-4Q9BYR9 128 aa5.54□□□□□ -1.52
RAB11FIP4-211ENST00000621161 KRTAP2-1Q9BYU5 128 aa5.54□□□□□ -1.52
RAB11FIP4-211ENST00000621161 LCE4AQ5TA78 99 aa5.51□□□□□ -1.53
RAB11FIP4-211ENST00000621161 MT1AP04731 61 aa5.48□□□□□ -1.53
RAB11FIP4-211ENST00000621161 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
RAB11FIP4-211ENST00000621161 KRTAP4-3Q9BYR4 195 aa5.44□□□□□ -1.54
RAB11FIP4-211ENST00000621161 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
RAB11FIP4-211ENST00000621161 HERC1Q15751 4861 aa5.42□□□□□ -1.54
RAB11FIP4-211ENST00000621161 KRTAP6-2Q3LI66 62 aa5.41□□□□□ -1.54
RAB11FIP4-211ENST00000621161 LCE2AQ5TA79 106 aaPredicted RBP5.3□□□□□ -1.56
RAB11FIP4-211ENST00000621161 KRTAP20-1Q3LI63 56 aa5.25□□□□□ -1.57
RAB11FIP4-211ENST00000621161 SYNE2Q8WXH0 6885 aaKnown RBP5.22□□□□□ -1.57
RAB11FIP4-211ENST00000621161 BIRC6Q9NR09 4857 aa5.22□□□□□ -1.57
RAB11FIP4-211ENST00000621161 KRTAP9-2Q9BYQ4 174 aa5.17□□□□□ -1.58
RAB11FIP4-211ENST00000621161 HMCN2Q8NDA2 5059 aa5.16□□□□□ -1.58
RAB11FIP4-211ENST00000621161 KRTAP2-2Q9BYT5 123 aa5.08□□□□□ -1.6
RAB11FIP4-211ENST00000621161 KRTAP9-4Q9BYQ2 154 aa5.06□□□□□ -1.6
RAB11FIP4-211ENST00000621161 RNF213Q63HN8 5207 aa5.01□□□□□ -1.61
RAB11FIP4-211ENST00000621161 EPPK1P58107 5090 aaKnown RBP5□□□□□ -1.61
RAB11FIP4-211ENST00000621161 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
RAB11FIP4-211ENST00000621161 KRTAP6-1Q3LI64 71 aa4.99□□□□□ -1.61
RAB11FIP4-211ENST00000621161 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
RAB11FIP4-211ENST00000621161 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
RAB11FIP4-211ENST00000621161 UBR4Q5T4S7 5183 aa4.89□□□□□ -1.63
RAB11FIP4-211ENST00000621161 KRTAP9-6A0A140TA67 174 aa4.86□□□□□ -1.63
RAB11FIP4-211ENST00000621161 FAT4Q6V0I7 4981 aa4.85□□□□□ -1.63
RAB11FIP4-211ENST00000621161 KRTAP9-9Q9BYP9 154 aa4.84□□□□□ -1.63
RAB11FIP4-211ENST00000621161 KRTAP6-3Q3LI67 103 aa4.8□□□□□ -1.64
RAB11FIP4-211ENST00000621161 ABCA13Q86UQ4 5058 aa4.8□□□□□ -1.64
RAB11FIP4-211ENST00000621161 MUC2Q02817 5179 aa4.68□□□□□ -1.66
RAB11FIP4-211ENST00000621161 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
RAB11FIP4-211ENST00000621161 FSIP2Q5CZC0 6907 aa4.61□□□□□ -1.67
RAB11FIP4-211ENST00000621161 KRTAP20-2Q3LI61 65 aa4.48□□□□□ -1.69
RAB11FIP4-211ENST00000621161 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.43□□□□□ -1.7
RAB11FIP4-211ENST00000621161 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
RAB11FIP4-211ENST00000621161 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
RAB11FIP4-211ENST00000621161 KMT2DO14686 5537 aa4.19□□□□□ -1.74
RAB11FIP4-211ENST00000621161 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
RAB11FIP4-211ENST00000621161 KRTAP4-4Q9BYR3 166 aa4.11□□□□□ -1.75
RAB11FIP4-211ENST00000621161 USH2AO75445 5202 aa4.04□□□□□ -1.76
RAB11FIP4-211ENST00000621161 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
RAB11FIP4-211ENST00000621161 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
RAB11FIP4-211ENST00000621161 KRTAP4-12Q9BQ66 201 aa3.91□□□□□ -1.78
RAB11FIP4-211ENST00000621161 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
RAB11FIP4-211ENST00000621161 NEBP20929 6669 aa3.85□□□□□ -1.79
RAB11FIP4-211ENST00000621161 MDN1Q9NU22 5596 aa3.84□□□□□ -1.79
RAB11FIP4-211ENST00000621161 KRTAP5-5Q701N2 237 aaPredicted RBP3.81□□□□□ -1.8
RAB11FIP4-211ENST00000621161 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
RAB11FIP4-211ENST00000621161 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
RAB11FIP4-211ENST00000621161 SSPOA2VEC9 5147 aa3.75□□□□□ -1.81
RAB11FIP4-211ENST00000621161 MUC12Q9UKN1 5478 aa3.75□□□□□ -1.81
RAB11FIP4-211ENST00000621161 MUC19Q7Z5P9 8384 aa3.72□□□□□ -1.81
RAB11FIP4-211ENST00000621161 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
RAB11FIP4-211ENST00000621161 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
RAB11FIP4-211ENST00000621161 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
RAB11FIP4-211ENST00000621161 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
RAB11FIP4-211ENST00000621161 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
RAB11FIP4-211ENST00000621161 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
RAB11FIP4-211ENST00000621161 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
RAB11FIP4-211ENST00000621161 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.94
RAB11FIP4-211ENST00000621161 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
RAB11FIP4-211ENST00000621161 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
RAB11FIP4-211ENST00000621161 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
RAB11FIP4-211ENST00000621161 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
RAB11FIP4-211ENST00000621161 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
RAB11FIP4-211ENST00000621161 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
RAB11FIP4-211ENST00000621161 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
RAB11FIP4-211ENST00000621161 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
RAB11FIP4-211ENST00000621161 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
RAB11FIP4-211ENST00000621161 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms