RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 FCGBPQ9Y6R7 5405 aaPredicted RBP4.31□□□□□ -1.72
TP53-226ENST00000620739 KRTAP8-1Q8IUC2 63 aa4.3□□□□□ -1.72
TP53-226ENST00000620739 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
TP53-226ENST00000620739 KRTAP19-5Q3LI72 72 aa4.24□□□□□ -1.73
TP53-226ENST00000620739 KRTAP9-2Q9BYQ4 174 aa4.24□□□□□ -1.73
TP53-226ENST00000620739 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
TP53-226ENST00000620739 KRTAP19-7Q3SYF9 63 aa4.15□□□□□ -1.74
TP53-226ENST00000620739 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
TP53-226ENST00000620739 MUC12Q9UKN1 5478 aa4.12□□□□□ -1.75
TP53-226ENST00000620739 CRCT1Q9UGL9 99 aa4.08□□□□□ -1.76
TP53-226ENST00000620739 SYNE2Q8WXH0 6885 aaKnown RBP4.05□□□□□ -1.76
TP53-226ENST00000620739 MT1EP04732 61 aa4.04□□□□□ -1.76
TP53-226ENST00000620739 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
TP53-226ENST00000620739 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
TP53-226ENST00000620739 MT1LQ93083 61 aa3.98□□□□□ -1.77
TP53-226ENST00000620739 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.98□□□□□ -1.77
TP53-226ENST00000620739 LOC100996750A0A140TA64 210 aa3.96□□□□□ -1.78
TP53-226ENST00000620739 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.78
TP53-226ENST00000620739 SPRR2FQ96RM1 72 aa3.95□□□□□ -1.78
TP53-226ENST00000620739 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
TP53-226ENST00000620739 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
TP53-226ENST00000620739 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
TP53-226ENST00000620739 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
TP53-226ENST00000620739 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
TP53-226ENST00000620739 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
TP53-226ENST00000620739 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.8
TP53-226ENST00000620739 KRTAP2-3P0C7H8 128 aa3.8□□□□□ -1.8
TP53-226ENST00000620739 KRTAP2-4Q9BYR9 128 aa3.8□□□□□ -1.8
TP53-226ENST00000620739 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
TP53-226ENST00000620739 MT1MQ8N339 61 aa3.8□□□□□ -1.8
TP53-226ENST00000620739 MT1GP13640 62 aa3.79□□□□□ -1.8
TP53-226ENST00000620739 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
TP53-226ENST00000620739 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
TP53-226ENST00000620739 LCE1DQ5T752 114 aa3.71□□□□□ -1.81
TP53-226ENST00000620739 SPRR2EP22531 72 aa3.68□□□□□ -1.82
TP53-226ENST00000620739 SPRR2BP35325 72 aa3.68□□□□□ -1.82
TP53-226ENST00000620739 SPRR2AP35326 72 aa3.68□□□□□ -1.82
TP53-226ENST00000620739 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
TP53-226ENST00000620739 SPRR2DP22532 72 aa3.53□□□□□ -1.84
TP53-226ENST00000620739 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
TP53-226ENST00000620739 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
TP53-226ENST00000620739 SYNE1Q8NF91 8797 aaKnown RBP3.47□□□□□ -1.85
TP53-226ENST00000620739 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.86
TP53-226ENST00000620739 NEBP20929 6669 aa3.41□□□□□ -1.86
TP53-226ENST00000620739 KRTAP6-1Q3LI64 71 aa3.4□□□□□ -1.86
TP53-226ENST00000620739 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
TP53-226ENST00000620739 PRM1P04553 51 aa3.34□□□□□ -1.88
TP53-226ENST00000620739 MT1AP04731 61 aa3.33□□□□□ -1.88
TP53-226ENST00000620739 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
TP53-226ENST00000620739 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.88
TP53-226ENST00000620739 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
TP53-226ENST00000620739 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
TP53-226ENST00000620739 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
TP53-226ENST00000620739 MT4P47944 62 aa3.15□□□□□ -1.9
TP53-226ENST00000620739 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
TP53-226ENST00000620739 HMCN1Q96RW7 5635 aa3.06□□□□□ -1.92
TP53-226ENST00000620739 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
TP53-226ENST00000620739 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
TP53-226ENST00000620739 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
TP53-226ENST00000620739 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
TP53-226ENST00000620739 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
TP53-226ENST00000620739 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -1.99
TP53-226ENST00000620739 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
TP53-226ENST00000620739 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
TP53-226ENST00000620739 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
TP53-226ENST00000620739 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
TP53-226ENST00000620739 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2
TP53-226ENST00000620739 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
TP53-226ENST00000620739 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
TP53-226ENST00000620739 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
TP53-226ENST00000620739 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
TP53-226ENST00000620739 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
TP53-226ENST00000620739 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
TP53-226ENST00000620739 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
TP53-226ENST00000620739 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
TP53-226ENST00000620739 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
TP53-226ENST00000620739 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 97.1 ms