RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
VPS11-207ENST00000620429 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.82
VPS11-207ENST00000620429 NEBP20929 6669 aa3.7□□□□□ -1.82
VPS11-207ENST00000620429 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
VPS11-207ENST00000620429 KRTAP19-5Q3LI72 72 aa3.69□□□□□ -1.82
VPS11-207ENST00000620429 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
VPS11-207ENST00000620429 KRTAP4-8A0A0G2JLE6 195 aa3.63□□□□□ -1.83
VPS11-207ENST00000620429 KRTAP4-8Q9BYQ9 185 aa3.63□□□□□ -1.83
VPS11-207ENST00000620429 KRTAP4-7Q9BYR0 210 aa3.49□□□□□ -1.85
VPS11-207ENST00000620429 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
VPS11-207ENST00000620429 KRTAP19-7Q3SYF9 63 aa3.47□□□□□ -1.85
VPS11-207ENST00000620429 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
VPS11-207ENST00000620429 KRTAP19-4Q3LI73 84 aa3.45□□□□□ -1.86
VPS11-207ENST00000620429 MUC12Q9UKN1 5478 aa3.45□□□□□ -1.86
VPS11-207ENST00000620429 SPRR2EP22531 72 aa3.42□□□□□ -1.86
VPS11-207ENST00000620429 SPRR2BP35325 72 aa3.42□□□□□ -1.86
VPS11-207ENST00000620429 SPRR2AP35326 72 aa3.42□□□□□ -1.86
VPS11-207ENST00000620429 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.86
VPS11-207ENST00000620429 SPRR2FQ96RM1 72 aa3.38□□□□□ -1.87
VPS11-207ENST00000620429 MT1LQ93083 61 aa3.37□□□□□ -1.87
VPS11-207ENST00000620429 MT1EP04732 61 aa3.37□□□□□ -1.87
VPS11-207ENST00000620429 MDN1Q9NU22 5596 aa3.32□□□□□ -1.88
VPS11-207ENST00000620429 SPRR2DP22532 72 aa3.32□□□□□ -1.88
VPS11-207ENST00000620429 LCE3BQ5TA77 95 aa3.26□□□□□ -1.89
VPS11-207ENST00000620429 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
VPS11-207ENST00000620429 LOC100996750A0A140TA64 210 aa3.24□□□□□ -1.89
VPS11-207ENST00000620429 MT1GP13640 62 aa3.2□□□□□ -1.9
VPS11-207ENST00000620429 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
VPS11-207ENST00000620429 KRTAP19-3Q7Z4W3 81 aa3.16□□□□□ -1.9
VPS11-207ENST00000620429 MT1MQ8N339 61 aa3.16□□□□□ -1.9
VPS11-207ENST00000620429 PRM1P04553 51 aa3.13□□□□□ -1.91
VPS11-207ENST00000620429 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
VPS11-207ENST00000620429 LCE5AQ5TCM9 118 aa3.08□□□□□ -1.92
VPS11-207ENST00000620429 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
VPS11-207ENST00000620429 MT1AP04731 61 aa3.07□□□□□ -1.92
VPS11-207ENST00000620429 LCE4AQ5TA78 99 aa3.05□□□□□ -1.92
VPS11-207ENST00000620429 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
VPS11-207ENST00000620429 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
VPS11-207ENST00000620429 KRTAP4-9Q9BYQ8 210 aa2.99□□□□□ -1.93
VPS11-207ENST00000620429 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
VPS11-207ENST00000620429 LCE1DQ5T752 114 aa2.96□□□□□ -1.94
VPS11-207ENST00000620429 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
VPS11-207ENST00000620429 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
VPS11-207ENST00000620429 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
VPS11-207ENST00000620429 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
VPS11-207ENST00000620429 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
VPS11-207ENST00000620429 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
VPS11-207ENST00000620429 AHNAK2Q8IVF2 5795 aa2.85□□□□□ -1.95
VPS11-207ENST00000620429 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
VPS11-207ENST00000620429 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
VPS11-207ENST00000620429 MT4P47944 62 aa2.82□□□□□ -1.96
VPS11-207ENST00000620429 KRTAP5-3Q6L8H2 238 aa2.78□□□□□ -1.96
VPS11-207ENST00000620429 KRTAP9-4Q9BYQ2 154 aa2.78□□□□□ -1.96
VPS11-207ENST00000620429 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
VPS11-207ENST00000620429 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
VPS11-207ENST00000620429 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
VPS11-207ENST00000620429 MT3P25713 68 aa2.62□□□□□ -1.99
VPS11-207ENST00000620429 KRTAP9-9Q9BYP9 154 aa2.58□□□□□ -2
VPS11-207ENST00000620429 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
VPS11-207ENST00000620429 KRTAP4-11Q9BYQ6 195 aa2.52□□□□□ -2.01
VPS11-207ENST00000620429 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
VPS11-207ENST00000620429 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
VPS11-207ENST00000620429 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
VPS11-207ENST00000620429 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
VPS11-207ENST00000620429 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
VPS11-207ENST00000620429 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
VPS11-207ENST00000620429 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.08
VPS11-207ENST00000620429 KRTAP4-2Q9BYR5 136 aa2.01□□□□□ -2.09
VPS11-207ENST00000620429 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
VPS11-207ENST00000620429 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
VPS11-207ENST00000620429 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
VPS11-207ENST00000620429 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.12
VPS11-207ENST00000620429 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
VPS11-207ENST00000620429 KRTAP4-4Q9BYR3 166 aa1.75□□□□□ -2.13
VPS11-207ENST00000620429 KRTAP4-12Q9BQ66 201 aa1.74□□□□□ -2.13
VPS11-207ENST00000620429 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
VPS11-207ENST00000620429 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 73.2 ms