RNA–Protein interactions for RNA: ENST00000619550.4

HNF4A-209, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 5 BASIC

Gene HNF4A, Length 4,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-209ENST00000619550 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
HNF4A-209ENST00000619550 FSIP2Q5CZC0 6907 aa3.63□□□□□ -1.83
HNF4A-209ENST00000619550 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
HNF4A-209ENST00000619550 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
HNF4A-209ENST00000619550 KRTAP4-7Q9BYR0 210 aa3.58□□□□□ -1.84
HNF4A-209ENST00000619550 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
HNF4A-209ENST00000619550 MT1LQ93083 61 aa3.56□□□□□ -1.84
HNF4A-209ENST00000619550 MT1EP04732 61 aa3.56□□□□□ -1.84
HNF4A-209ENST00000619550 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
HNF4A-209ENST00000619550 USH2AO75445 5202 aa3.54□□□□□ -1.84
HNF4A-209ENST00000619550 KRTAP2-3P0C7H8 128 aa3.54□□□□□ -1.84
HNF4A-209ENST00000619550 KRTAP2-4Q9BYR9 128 aa3.54□□□□□ -1.84
HNF4A-209ENST00000619550 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
HNF4A-209ENST00000619550 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
HNF4A-209ENST00000619550 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.44□□□□□ -1.86
HNF4A-209ENST00000619550 MT1MQ8N339 61 aa3.44□□□□□ -1.86
HNF4A-209ENST00000619550 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
HNF4A-209ENST00000619550 PRM1P04553 51 aa3.4□□□□□ -1.87
HNF4A-209ENST00000619550 KRTAP19-7Q3SYF9 63 aa3.38□□□□□ -1.87
HNF4A-209ENST00000619550 SYNE2Q8WXH0 6885 aaKnown RBP3.38□□□□□ -1.87
HNF4A-209ENST00000619550 KMT2DO14686 5537 aa3.34□□□□□ -1.87
HNF4A-209ENST00000619550 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.88
HNF4A-209ENST00000619550 LOC100996750A0A140TA64 210 aa3.33□□□□□ -1.88
HNF4A-209ENST00000619550 MT3P25713 68 aa3.33□□□□□ -1.88
HNF4A-209ENST00000619550 MT4P47944 62 aa3.33□□□□□ -1.88
HNF4A-209ENST00000619550 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
HNF4A-209ENST00000619550 LCE1AQ5T7P2 110 aa3.31□□□□□ -1.88
HNF4A-209ENST00000619550 MACF1Q9UPN3 7388 aaKnown RBP3.29□□□□□ -1.88
HNF4A-209ENST00000619550 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
HNF4A-209ENST00000619550 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.88
HNF4A-209ENST00000619550 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
HNF4A-209ENST00000619550 SSPOA2VEC9 5147 aa3.25□□□□□ -1.89
HNF4A-209ENST00000619550 MT1AP04731 61 aa3.21□□□□□ -1.9
HNF4A-209ENST00000619550 KRTAP4-9Q9BYQ8 210 aa3.14□□□□□ -1.91
HNF4A-209ENST00000619550 FCGBPQ9Y6R7 5405 aaPredicted RBP3.13□□□□□ -1.91
HNF4A-209ENST00000619550 LCE5AQ5TCM9 118 aa3.1□□□□□ -1.91
HNF4A-209ENST00000619550 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
HNF4A-209ENST00000619550 MUC12Q9UKN1 5478 aa3.06□□□□□ -1.92
HNF4A-209ENST00000619550 DSTQ03001 7570 aaKnown RBP3.04□□□□□ -1.92
HNF4A-209ENST00000619550 LCE1DQ5T752 114 aa3.02□□□□□ -1.93
HNF4A-209ENST00000619550 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
HNF4A-209ENST00000619550 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
HNF4A-209ENST00000619550 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
HNF4A-209ENST00000619550 NEBP20929 6669 aa2.98□□□□□ -1.93
HNF4A-209ENST00000619550 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
HNF4A-209ENST00000619550 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
HNF4A-209ENST00000619550 MDN1Q9NU22 5596 aa2.86□□□□□ -1.95
HNF4A-209ENST00000619550 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
HNF4A-209ENST00000619550 KRTAP9-9Q9BYP9 154 aa2.77□□□□□ -1.97
HNF4A-209ENST00000619550 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
HNF4A-209ENST00000619550 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
HNF4A-209ENST00000619550 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
HNF4A-209ENST00000619550 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -1.99
HNF4A-209ENST00000619550 KRTAP20-2Q3LI61 65 aa2.55□□□□□ -2
HNF4A-209ENST00000619550 KRTAP4-6Q9BYQ5 205 aa2.5□□□□□ -2.01
HNF4A-209ENST00000619550 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
HNF4A-209ENST00000619550 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
HNF4A-209ENST00000619550 KRTAP4-11Q9BYQ6 195 aa2.44□□□□□ -2.02
HNF4A-209ENST00000619550 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
HNF4A-209ENST00000619550 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
HNF4A-209ENST00000619550 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
HNF4A-209ENST00000619550 KRTAP4-12Q9BQ66 201 aa2.12□□□□□ -2.07
HNF4A-209ENST00000619550 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
HNF4A-209ENST00000619550 MUC5ACP98088 5654 aa2.09□□□□□ -2.07
HNF4A-209ENST00000619550 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
HNF4A-209ENST00000619550 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
HNF4A-209ENST00000619550 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
HNF4A-209ENST00000619550 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
HNF4A-209ENST00000619550 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
HNF4A-209ENST00000619550 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
HNF4A-209ENST00000619550 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
HNF4A-209ENST00000619550 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
HNF4A-209ENST00000619550 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
HNF4A-209ENST00000619550 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
HNF4A-209ENST00000619550 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.76□□□□□ -2.13
HNF4A-209ENST00000619550 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
HNF4A-209ENST00000619550 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms