RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 SSPOA2VEC9 5147 aa4.06□□□□□ -1.76
TP53-225ENST00000619485 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
TP53-225ENST00000619485 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
TP53-225ENST00000619485 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.79
TP53-225ENST00000619485 KRTAP19-5Q3LI72 72 aa3.86□□□□□ -1.79
TP53-225ENST00000619485 MT3P25713 68 aa3.85□□□□□ -1.79
TP53-225ENST00000619485 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
TP53-225ENST00000619485 FCGBPQ9Y6R7 5405 aaPredicted RBP3.81□□□□□ -1.8
TP53-225ENST00000619485 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
TP53-225ENST00000619485 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
TP53-225ENST00000619485 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
TP53-225ENST00000619485 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
TP53-225ENST00000619485 KRTAP4-7Q9BYR0 210 aa3.69□□□□□ -1.82
TP53-225ENST00000619485 CRCT1Q9UGL9 99 aa3.69□□□□□ -1.82
TP53-225ENST00000619485 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
TP53-225ENST00000619485 KRTAP19-6Q3LI70 58 aa3.64□□□□□ -1.83
TP53-225ENST00000619485 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
TP53-225ENST00000619485 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
TP53-225ENST00000619485 SYNE2Q8WXH0 6885 aaKnown RBP3.59□□□□□ -1.84
TP53-225ENST00000619485 KRTAP4-9Q9BYQ8 210 aa3.59□□□□□ -1.84
TP53-225ENST00000619485 MT1EP04732 61 aa3.54□□□□□ -1.84
TP53-225ENST00000619485 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
TP53-225ENST00000619485 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
TP53-225ENST00000619485 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
TP53-225ENST00000619485 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
TP53-225ENST00000619485 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
TP53-225ENST00000619485 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
TP53-225ENST00000619485 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
TP53-225ENST00000619485 MT1LQ93083 61 aa3.51□□□□□ -1.85
TP53-225ENST00000619485 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.86
TP53-225ENST00000619485 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.87
TP53-225ENST00000619485 MT1GP13640 62 aa3.38□□□□□ -1.87
TP53-225ENST00000619485 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
TP53-225ENST00000619485 MT1MQ8N339 61 aa3.33□□□□□ -1.88
TP53-225ENST00000619485 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
TP53-225ENST00000619485 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
TP53-225ENST00000619485 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
TP53-225ENST00000619485 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
TP53-225ENST00000619485 NEBP20929 6669 aa3.16□□□□□ -1.9
TP53-225ENST00000619485 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
TP53-225ENST00000619485 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
TP53-225ENST00000619485 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
TP53-225ENST00000619485 SPRR2EP22531 72 aa3.12□□□□□ -1.91
TP53-225ENST00000619485 SPRR2BP35325 72 aa3.12□□□□□ -1.91
TP53-225ENST00000619485 SPRR2AP35326 72 aa3.12□□□□□ -1.91
TP53-225ENST00000619485 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
TP53-225ENST00000619485 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
TP53-225ENST00000619485 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
TP53-225ENST00000619485 MT1AP04731 61 aa3□□□□□ -1.93
TP53-225ENST00000619485 SPRR2DP22532 72 aa2.97□□□□□ -1.93
TP53-225ENST00000619485 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
TP53-225ENST00000619485 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
TP53-225ENST00000619485 PRM1P04553 51 aa2.9□□□□□ -1.95
TP53-225ENST00000619485 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.95
TP53-225ENST00000619485 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
TP53-225ENST00000619485 MT4P47944 62 aa2.72□□□□□ -1.97
TP53-225ENST00000619485 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
TP53-225ENST00000619485 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
TP53-225ENST00000619485 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
TP53-225ENST00000619485 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2
TP53-225ENST00000619485 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
TP53-225ENST00000619485 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
TP53-225ENST00000619485 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
TP53-225ENST00000619485 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
TP53-225ENST00000619485 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
TP53-225ENST00000619485 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
TP53-225ENST00000619485 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
TP53-225ENST00000619485 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
TP53-225ENST00000619485 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
TP53-225ENST00000619485 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
TP53-225ENST00000619485 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
TP53-225ENST00000619485 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
TP53-225ENST00000619485 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
TP53-225ENST00000619485 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
TP53-225ENST00000619485 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
TP53-225ENST00000619485 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
TP53-225ENST00000619485 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 92.1 ms