RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 KRTAP19-4Q3LI73 84 aa6.46□□□□□ -1.38
PCDHGB3-202ENST00000618934 MUC12Q9UKN1 5478 aa6.45□□□□□ -1.38
PCDHGB3-202ENST00000618934 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
PCDHGB3-202ENST00000618934 LCE2DQ5TA82 110 aaPredicted RBP6.42□□□□□ -1.38
PCDHGB3-202ENST00000618934 LOC100996750A0A140TA64 210 aa6.39□□□□□ -1.39
PCDHGB3-202ENST00000618934 MT1GP13640 62 aa6.29□□□□□ -1.4
PCDHGB3-202ENST00000618934 MT1MQ8N339 61 aa6.26□□□□□ -1.41
PCDHGB3-202ENST00000618934 KRTAP19-3Q7Z4W3 81 aa6.25□□□□□ -1.41
PCDHGB3-202ENST00000618934 DSTQ03001 7570 aaKnown RBP6.17□□□□□ -1.42
PCDHGB3-202ENST00000618934 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
PCDHGB3-202ENST00000618934 SPRR2FQ96RM1 72 aa6.07□□□□□ -1.44
PCDHGB3-202ENST00000618934 LCE5AQ5TCM9 118 aa6.06□□□□□ -1.44
PCDHGB3-202ENST00000618934 MACF1Q9UPN3 7388 aaKnown RBP6.05□□□□□ -1.44
PCDHGB3-202ENST00000618934 MDN1Q9NU22 5596 aa5.86□□□□□ -1.47
PCDHGB3-202ENST00000618934 SYNE2Q8WXH0 6885 aaKnown RBP5.86□□□□□ -1.47
PCDHGB3-202ENST00000618934 LCE3BQ5TA77 95 aa5.79□□□□□ -1.48
PCDHGB3-202ENST00000618934 KRTAP9-2Q9BYQ4 174 aa5.77□□□□□ -1.49
PCDHGB3-202ENST00000618934 KRTAP12-4P60329 112 aa5.76□□□□□ -1.49
PCDHGB3-202ENST00000618934 KRTAP4-9Q9BYQ8 210 aa5.74□□□□□ -1.49
PCDHGB3-202ENST00000618934 KRTAP6-1Q3LI64 71 aa5.72□□□□□ -1.49
PCDHGB3-202ENST00000618934 SYNE1Q8NF91 8797 aaKnown RBP5.68□□□□□ -1.5
PCDHGB3-202ENST00000618934 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
PCDHGB3-202ENST00000618934 KRTAP5-9P26371 169 aa5.61□□□□□ -1.51
PCDHGB3-202ENST00000618934 MT1AP04731 61 aa5.58□□□□□ -1.52
PCDHGB3-202ENST00000618934 KRTAP5-5Q701N2 237 aaPredicted RBP5.54□□□□□ -1.52
PCDHGB3-202ENST00000618934 SPRR2EP22531 72 aa5.52□□□□□ -1.53
PCDHGB3-202ENST00000618934 SPRR2BP35325 72 aa5.52□□□□□ -1.53
PCDHGB3-202ENST00000618934 SPRR2AP35326 72 aa5.52□□□□□ -1.53
PCDHGB3-202ENST00000618934 KRTAP9-6A0A140TA67 174 aa5.4□□□□□ -1.54
PCDHGB3-202ENST00000618934 LCE3DQ9BYE3 92 aa5.39□□□□□ -1.55
PCDHGB3-202ENST00000618934 LCE3EQ5T5B0 92 aa5.3□□□□□ -1.56
PCDHGB3-202ENST00000618934 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
PCDHGB3-202ENST00000618934 SPRR2DP22532 72 aa5.26□□□□□ -1.57
PCDHGB3-202ENST00000618934 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
PCDHGB3-202ENST00000618934 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.59
PCDHGB3-202ENST00000618934 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.13□□□□□ -1.59
PCDHGB3-202ENST00000618934 KRTAP6-2Q3LI66 62 aa5.13□□□□□ -1.59
PCDHGB3-202ENST00000618934 PRM1P04553 51 aa5.12□□□□□ -1.59
PCDHGB3-202ENST00000618934 KRTAP6-3Q3LI67 103 aa5.11□□□□□ -1.59
PCDHGB3-202ENST00000618934 MT3P25713 68 aa4.99□□□□□ -1.61
PCDHGB3-202ENST00000618934 KRTAP5-4Q6L8H1 288 aa4.86□□□□□ -1.63
PCDHGB3-202ENST00000618934 NEBP20929 6669 aa4.79□□□□□ -1.64
PCDHGB3-202ENST00000618934 KRTAP4-6Q9BYQ5 205 aa4.78□□□□□ -1.64
PCDHGB3-202ENST00000618934 MT4P47944 62 aa4.7□□□□□ -1.66
PCDHGB3-202ENST00000618934 KRTAP20-2Q3LI61 65 aa4.59□□□□□ -1.67
PCDHGB3-202ENST00000618934 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
PCDHGB3-202ENST00000618934 HMCN1Q96RW7 5635 aa4.53□□□□□ -1.68
PCDHGB3-202ENST00000618934 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
PCDHGB3-202ENST00000618934 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
PCDHGB3-202ENST00000618934 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
PCDHGB3-202ENST00000618934 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
PCDHGB3-202ENST00000618934 KRTAP20-1Q3LI63 56 aa4.35□□□□□ -1.71
PCDHGB3-202ENST00000618934 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
PCDHGB3-202ENST00000618934 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
PCDHGB3-202ENST00000618934 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
PCDHGB3-202ENST00000618934 KRTAP5-10Q6L8G5 202 aa3.97□□□□□ -1.77
PCDHGB3-202ENST00000618934 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
PCDHGB3-202ENST00000618934 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
PCDHGB3-202ENST00000618934 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
PCDHGB3-202ENST00000618934 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
PCDHGB3-202ENST00000618934 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
PCDHGB3-202ENST00000618934 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
PCDHGB3-202ENST00000618934 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
PCDHGB3-202ENST00000618934 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
PCDHGB3-202ENST00000618934 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.84
PCDHGB3-202ENST00000618934 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
PCDHGB3-202ENST00000618934 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
PCDHGB3-202ENST00000618934 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
PCDHGB3-202ENST00000618934 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.87
PCDHGB3-202ENST00000618934 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
PCDHGB3-202ENST00000618934 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
PCDHGB3-202ENST00000618934 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
PCDHGB3-202ENST00000618934 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
PCDHGB3-202ENST00000618934 KRTAP21-1Q3LI58 79 aa3.22□□□□□ -1.89
PCDHGB3-202ENST00000618934 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
PCDHGB3-202ENST00000618934 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
PCDHGB3-202ENST00000618934 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 125.6 ms