RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 A6NED7 52 aa7.94□□□□□ -1.14
SYNGR3-206ENST00000618464 MT1GP13640 62 aa7.94□□□□□ -1.14
SYNGR3-206ENST00000618464 C10orf95Q9H7T3 257 aa7.94□□□□□ -1.14
SYNGR3-206ENST00000618464 TNP1P09430 55 aa7.91□□□□□ -1.14
SYNGR3-206ENST00000618464 LCE3AQ5TA76 89 aa7.9□□□□□ -1.14
SYNGR3-206ENST00000618464 PP632Q6XCG6 107 aa7.88□□□□□ -1.15
SYNGR3-206ENST00000618464 LCE1DQ5T752 114 aa7.86□□□□□ -1.15
SYNGR3-206ENST00000618464 MT1LQ93083 61 aa7.86□□□□□ -1.15
SYNGR3-206ENST00000618464 MT1MQ8N339 61 aa7.84□□□□□ -1.15
SYNGR3-206ENST00000618464 MT4P47944 62 aa7.74□□□□□ -1.17
SYNGR3-206ENST00000618464 HMCN1Q96RW7 5635 aa7.74□□□□□ -1.17
SYNGR3-206ENST00000618464 LCE4AQ5TA78 99 aa7.73□□□□□ -1.17
SYNGR3-206ENST00000618464 KRTAP4-3Q9BYR4 195 aa7.7□□□□□ -1.18
SYNGR3-206ENST00000618464 KRTAP25-1Q3LHN0 102 aa7.63□□□□□ -1.19
SYNGR3-206ENST00000618464 CDC42SE1Q9NRR8 79 aa7.61□□□□□ -1.19
SYNGR3-206ENST00000618464 AHNAK2Q8IVF2 5795 aa7.59□□□□□ -1.19
SYNGR3-206ENST00000618464 KRTAP12-3P60328 96 aa7.57□□□□□ -1.2
SYNGR3-206ENST00000618464 KRTAP5-4Q6L8H1 288 aa7.55□□□□□ -1.2
SYNGR3-206ENST00000618464 KRTAP4-7Q9BYR0 210 aa7.51□□□□□ -1.21
SYNGR3-206ENST00000618464 KRTAP4-6Q9BYQ5 205 aa7.5□□□□□ -1.21
SYNGR3-206ENST00000618464 KRTAP5-10Q6L8G5 202 aa7.46□□□□□ -1.22
SYNGR3-206ENST00000618464 ROMO1P60602 79 aa7.43□□□□□ -1.22
SYNGR3-206ENST00000618464 KRTAP23-1A1A580 65 aa7.34□□□□□ -1.23
SYNGR3-206ENST00000618464 KRTAP5-3Q6L8H2 238 aa7.22□□□□□ -1.25
SYNGR3-206ENST00000618464 BRK1Q8WUW1 75 aa7.22□□□□□ -1.25
SYNGR3-206ENST00000618464 KRTAP5-7Q6L8G8 165 aa7.2□□□□□ -1.26
SYNGR3-206ENST00000618464 KRTAP20-2Q3LI61 65 aa7.16□□□□□ -1.26
SYNGR3-206ENST00000618464 KRTAP5-5Q701N2 237 aaPredicted RBP7.16□□□□□ -1.26
SYNGR3-206ENST00000618464 LOC100996750A0A140TA64 210 aa7.12□□□□□ -1.27
SYNGR3-206ENST00000618464 SPRR5A0A1B0GTR4 108 aa7.06□□□□□ -1.28
SYNGR3-206ENST00000618464 KRTAP15-1Q3LI76 137 aa7.06□□□□□ -1.28
SYNGR3-206ENST00000618464 KRTAP19-4Q3LI73 84 aa7.03□□□□□ -1.28
SYNGR3-206ENST00000618464 KRTAP12-4P60329 112 aa7□□□□□ -1.29
SYNGR3-206ENST00000618464 LCE3CQ5T5A8 94 aa6.96□□□□□ -1.3
SYNGR3-206ENST00000618464 SYNE1Q8NF91 8797 aaKnown RBP6.93□□□□□ -1.3
SYNGR3-206ENST00000618464 PMAIP1Q13794 54 aa6.81□□□□□ -1.32
SYNGR3-206ENST00000618464 MT1AP04731 61 aa6.67□□□□□ -1.34
SYNGR3-206ENST00000618464 KRTAP6-1Q3LI64 71 aa6.66□□□□□ -1.34
SYNGR3-206ENST00000618464 KRTAP4-11Q9BYQ6 195 aa6.6□□□□□ -1.35
SYNGR3-206ENST00000618464 KRTAP9-6A8MVA2 160 aa6.59□□□□□ -1.35
SYNGR3-206ENST00000618464 PRO0628Q9UI54 55 aa6.58□□□□□ -1.36
SYNGR3-206ENST00000618464 KRTAP5-2Q701N4 177 aa6.56□□□□□ -1.36
SYNGR3-206ENST00000618464 KRTAP9-4Q9BYQ2 154 aa6.45□□□□□ -1.38
SYNGR3-206ENST00000618464 PRAC1Q96KF2 57 aa6.44□□□□□ -1.38
SYNGR3-206ENST00000618464 KRTAP5-8O75690 187 aa6.41□□□□□ -1.38
SYNGR3-206ENST00000618464 KRTAP6-2Q3LI66 62 aa6.38□□□□□ -1.39
SYNGR3-206ENST00000618464 OBSCNQ5VST9 7968 aa6.36□□□□□ -1.39
SYNGR3-206ENST00000618464 AHNAKQ09666 5890 aaKnown RBP6.32□□□□□ -1.4
SYNGR3-206ENST00000618464 MUC5ACP98088 5654 aa6.29□□□□□ -1.4
SYNGR3-206ENST00000618464 MUC5BQ9HC84 5762 aaPredicted RBP6.27□□□□□ -1.41
SYNGR3-206ENST00000618464 KTN1-AS1Q86SY8 53 aa6.22□□□□□ -1.41
SYNGR3-206ENST00000618464 KRTAP9-9Q9BYP9 154 aa6.1□□□□□ -1.43
SYNGR3-206ENST00000618464 MT3P25713 68 aa6.09□□□□□ -1.43
SYNGR3-206ENST00000618464 SVIPQ8NHG7 77 aa5.98□□□□□ -1.45
SYNGR3-206ENST00000618464 KRTAP5-1Q6L8H4 278 aa5.96□□□□□ -1.46
SYNGR3-206ENST00000618464 LCE1EQ5T753 118 aa5.57□□□□□ -1.52
SYNGR3-206ENST00000618464 LUZP6Q538Z0 58 aa5.46□□□□□ -1.54
SYNGR3-206ENST00000618464 LCE1BQ5T7P3 118 aa5.35□□□□□ -1.55
SYNGR3-206ENST00000618464 KRTAP4-2Q9BYR5 136 aa5.31□□□□□ -1.56
SYNGR3-206ENST00000618464 LCE1CQ5T751 118 aa5.19□□□□□ -1.58
SYNGR3-206ENST00000618464 H3BS24 57 aa5.11□□□□□ -1.59
SYNGR3-206ENST00000618464 LCE3DQ9BYE3 92 aa5.04□□□□□ -1.6
SYNGR3-206ENST00000618464 KRTAP4-12Q9BQ66 201 aa4.96□□□□□ -1.62
SYNGR3-206ENST00000618464 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
SYNGR3-206ENST00000618464 KRTAP5-11Q6L8G4 156 aa4.71□□□□□ -1.66
SYNGR3-206ENST00000618464 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.7□□□□□ -1.66
SYNGR3-206ENST00000618464 NDUFAF8A1L188 74 aa4.68□□□□□ -1.66
SYNGR3-206ENST00000618464 LCE1FQ5T754 118 aa4.63□□□□□ -1.67
SYNGR3-206ENST00000618464 KRTAP21-2Q3LI59 83 aa4.37□□□□□ -1.71
SYNGR3-206ENST00000618464 PHGR1C9JFL3 82 aa4.35□□□□□ -1.71
SYNGR3-206ENST00000618464 KRTAP4-4Q9BYR3 166 aa4.07□□□□□ -1.76
SYNGR3-206ENST00000618464 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
SYNGR3-206ENST00000618464 MUC19Q7Z5P9 8384 aa3.93□□□□□ -1.78
SYNGR3-206ENST00000618464 INE1O15225 51 aa3.83□□□□□ -1.8
SYNGR3-206ENST00000618464 PRM1P04553 51 aa3.81□□□□□ -1.8
SYNGR3-206ENST00000618464 KRTAP21-1Q3LI58 79 aa3.28□□□□□ -1.88
SYNGR3-206ENST00000618464 MUC16Q8WXI7 14507 aa2.7□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms