RNA–Protein interactions for RNA: ENST00000617489.1

MALAT1-210, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 318 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-210ENST00000617489 MT1BP07438 61 aa1.84□□□□□ -2.11
MALAT1-210ENST00000617489 SMIM26A0A096LP01 95 aa1.82□□□□□ -2.12
MALAT1-210ENST00000617489 V9GYY9 64 aa1.82□□□□□ -2.12
MALAT1-210ENST00000617489 CAMK2N1Q7Z7J9 78 aa1.81□□□□□ -2.12
MALAT1-210ENST00000617489 SPATA8Q6RVD6 105 aa1.8□□□□□ -2.12
MALAT1-210ENST00000617489 SPINT4Q6UDR6 99 aa1.8□□□□□ -2.12
MALAT1-210ENST00000617489 LINC01558Q9Y6Z2 57 aa1.8□□□□□ -2.12
MALAT1-210ENST00000617489 A0A0D9SG42 100 aa1.79□□□□□ -2.12
MALAT1-210ENST00000617489 UQCR11O14957 56 aa1.79□□□□□ -2.12
MALAT1-210ENST00000617489 SPRR5A0A1B0GTR4 108 aa1.77□□□□□ -2.13
MALAT1-210ENST00000617489 K7ERS5 55 aa1.77□□□□□ -2.13
MALAT1-210ENST00000617489 RPS28P62857 69 aaKnown RBP1.75□□□□□ -2.13
MALAT1-210ENST00000617489 KRTAP13-4Q3LI77 160 aa1.75□□□□□ -2.13
MALAT1-210ENST00000617489 MT1XP80297 61 aa1.74□□□□□ -2.13
MALAT1-210ENST00000617489 MIR22HGQ0VDD5 57 aa1.74□□□□□ -2.13
MALAT1-210ENST00000617489 Q1T7F1 81 aa1.74□□□□□ -2.13
MALAT1-210ENST00000617489 KRTAP6-3Q3LI67 103 aa1.74□□□□□ -2.13
MALAT1-210ENST00000617489 USH2AO75445 5202 aa1.74□□□□□ -2.13
MALAT1-210ENST00000617489 PSPHP1O15172 72 aa1.73□□□□□ -2.13
MALAT1-210ENST00000617489 KRTAP12-1P59990 96 aa1.73□□□□□ -2.13
MALAT1-210ENST00000617489 SYNE2Q8WXH0 6885 aaKnown RBP1.72□□□□□ -2.13
MALAT1-210ENST00000617489 SSPOA2VEC9 5147 aa1.72□□□□□ -2.13
MALAT1-210ENST00000617489 A6NED7 52 aa1.71□□□□□ -2.14
MALAT1-210ENST00000617489 KRTAP8-1Q8IUC2 63 aa1.71□□□□□ -2.14
MALAT1-210ENST00000617489 TNP1P09430 55 aa1.7□□□□□ -2.14
MALAT1-210ENST00000617489 FCGBPQ9Y6R7 5405 aaPredicted RBP1.69□□□□□ -2.14
MALAT1-210ENST00000617489 MACF1Q9UPN3 7388 aaKnown RBP1.68□□□□□ -2.14
MALAT1-210ENST00000617489 SPRR2FQ96RM1 72 aa1.68□□□□□ -2.14
MALAT1-210ENST00000617489 SPRR2EP22531 72 aa1.64□□□□□ -2.15
MALAT1-210ENST00000617489 SPRR2BP35325 72 aa1.64□□□□□ -2.15
MALAT1-210ENST00000617489 SPRR2AP35326 72 aa1.64□□□□□ -2.15
MALAT1-210ENST00000617489 C10orf95Q9H7T3 257 aa1.63□□□□□ -2.15
MALAT1-210ENST00000617489 CDC42SE1Q9NRR8 79 aa1.63□□□□□ -2.15
MALAT1-210ENST00000617489 KRTAP25-1Q3LHN0 102 aa1.62□□□□□ -2.15
MALAT1-210ENST00000617489 KRTAP20-1Q3LI63 56 aa1.61□□□□□ -2.15
MALAT1-210ENST00000617489 NEBP20929 6669 aa1.6□□□□□ -2.15
MALAT1-210ENST00000617489 KRTAP12-4P60329 112 aa1.6□□□□□ -2.15
MALAT1-210ENST00000617489 MUC12Q9UKN1 5478 aa1.6□□□□□ -2.15
MALAT1-210ENST00000617489 KRTAP2-3P0C7H8 128 aa1.59□□□□□ -2.15
MALAT1-210ENST00000617489 ROMO1P60602 79 aa1.59□□□□□ -2.15
MALAT1-210ENST00000617489 KRTAP2-4Q9BYR9 128 aa1.59□□□□□ -2.15
MALAT1-210ENST00000617489 SPRR2DP22532 72 aa1.58□□□□□ -2.16
MALAT1-210ENST00000617489 KRTAP19-5Q3LI72 72 aa1.57□□□□□ -2.16
MALAT1-210ENST00000617489 MT1GP13640 62 aa1.56□□□□□ -2.16
MALAT1-210ENST00000617489 KRTAP19-7Q3SYF9 63 aa1.55□□□□□ -2.16
MALAT1-210ENST00000617489 KRTAP19-3Q7Z4W3 81 aa1.55□□□□□ -2.16
MALAT1-210ENST00000617489 BRK1Q8WUW1 75 aa1.55□□□□□ -2.16
MALAT1-210ENST00000617489 KRTAP2-1Q9BYU5 128 aa1.55□□□□□ -2.16
MALAT1-210ENST00000617489 MT1EP04732 61 aa1.54□□□□□ -2.16
MALAT1-210ENST00000617489 KRTAP12-3P60328 96 aa1.54□□□□□ -2.16
MALAT1-210ENST00000617489 KMT2DO14686 5537 aa1.54□□□□□ -2.16
MALAT1-210ENST00000617489 MDN1Q9NU22 5596 aa1.5□□□□□ -2.17
MALAT1-210ENST00000617489 PMAIP1Q13794 54 aa1.5□□□□□ -2.17
MALAT1-210ENST00000617489 MT1LQ93083 61 aa1.49□□□□□ -2.17
MALAT1-210ENST00000617489 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
MALAT1-210ENST00000617489 MT1MQ8N339 61 aa1.47□□□□□ -2.17
MALAT1-210ENST00000617489 PRO0628Q9UI54 55 aa1.42□□□□□ -2.18
MALAT1-210ENST00000617489 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.18
MALAT1-210ENST00000617489 GPR98Q8WXG9 6306 aa1.39□□□□□ -2.19
MALAT1-210ENST00000617489 MT4P47944 62 aa1.37□□□□□ -2.19
MALAT1-210ENST00000617489 KTN1-AS1Q86SY8 53 aa1.34□□□□□ -2.19
MALAT1-210ENST00000617489 MT1AP04731 61 aa1.29□□□□□ -2.2
MALAT1-210ENST00000617489 KRTAP20-2Q3LI61 65 aa1.27□□□□□ -2.21
MALAT1-210ENST00000617489 KRTAP6-1Q3LI64 71 aa1.26□□□□□ -2.21
MALAT1-210ENST00000617489 SYNE1Q8NF91 8797 aaKnown RBP1.26□□□□□ -2.21
MALAT1-210ENST00000617489 LUZP6Q538Z0 58 aa1.25□□□□□ -2.21
MALAT1-210ENST00000617489 KRTAP5-10Q6L8G5 202 aa1.25□□□□□ -2.21
MALAT1-210ENST00000617489 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
MALAT1-210ENST00000617489 KRTAP6-2Q3LI66 62 aa1.2□□□□□ -2.22
MALAT1-210ENST00000617489 MUC5ACP98088 5654 aa1.06□□□□□ -2.24
MALAT1-210ENST00000617489 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
MALAT1-210ENST00000617489 MUC5BQ9HC84 5762 aaPredicted RBP1.05□□□□□ -2.24
MALAT1-210ENST00000617489 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
MALAT1-210ENST00000617489 INE1O15225 51 aa0.87□□□□□ -2.27
MALAT1-210ENST00000617489 PRM1P04553 51 aa0.8□□□□□ -2.28
MALAT1-210ENST00000617489 PHGR1C9JFL3 82 aa0.75□□□□□ -2.29
MALAT1-210ENST00000617489 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms