RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 KRTAP19-6Q3LI70 58 aa4.93□□□□□ -1.62
GPN1-212ENST00000616939 SSPOA2VEC9 5147 aa4.92□□□□□ -1.62
GPN1-212ENST00000616939 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.63
GPN1-212ENST00000616939 MT1MQ8N339 61 aa4.9□□□□□ -1.63
GPN1-212ENST00000616939 MT1GP13640 62 aa4.88□□□□□ -1.63
GPN1-212ENST00000616939 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
GPN1-212ENST00000616939 KRTAP4-3Q9BYR4 195 aa4.86□□□□□ -1.63
GPN1-212ENST00000616939 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
GPN1-212ENST00000616939 CRCT1Q9UGL9 99 aa4.72□□□□□ -1.65
GPN1-212ENST00000616939 MT1AP04731 61 aa4.69□□□□□ -1.66
GPN1-212ENST00000616939 LCE5AQ5TCM9 118 aa4.65□□□□□ -1.66
GPN1-212ENST00000616939 FSIP2Q5CZC0 6907 aa4.64□□□□□ -1.67
GPN1-212ENST00000616939 LCE3BQ5TA77 95 aa4.57□□□□□ -1.68
GPN1-212ENST00000616939 KRTAP9-7A8MTY7 169 aa4.53□□□□□ -1.68
GPN1-212ENST00000616939 FCGBPQ9Y6R7 5405 aaPredicted RBP4.52□□□□□ -1.69
GPN1-212ENST00000616939 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
GPN1-212ENST00000616939 LCE3DQ9BYE3 92 aa4.47□□□□□ -1.69
GPN1-212ENST00000616939 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
GPN1-212ENST00000616939 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
GPN1-212ENST00000616939 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
GPN1-212ENST00000616939 SPRR2FQ96RM1 72 aa4.44□□□□□ -1.7
GPN1-212ENST00000616939 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
GPN1-212ENST00000616939 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
GPN1-212ENST00000616939 KRTAP4-6Q9BYQ5 205 aa4.36□□□□□ -1.71
GPN1-212ENST00000616939 PRM1P04553 51 aa4.35□□□□□ -1.71
GPN1-212ENST00000616939 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.72
GPN1-212ENST00000616939 KRTAP9-4Q9BYQ2 154 aa4.18□□□□□ -1.74
GPN1-212ENST00000616939 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
GPN1-212ENST00000616939 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.75
GPN1-212ENST00000616939 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
GPN1-212ENST00000616939 KRTAP5-9P26371 169 aa4.11□□□□□ -1.75
GPN1-212ENST00000616939 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
GPN1-212ENST00000616939 MACF1Q9UPN3 7388 aaKnown RBP4.07□□□□□ -1.76
GPN1-212ENST00000616939 MT3P25713 68 aa4□□□□□ -1.77
GPN1-212ENST00000616939 KRTAP6-3Q3LI67 103 aa3.98□□□□□ -1.77
GPN1-212ENST00000616939 SPRR2EP22531 72 aa3.97□□□□□ -1.77
GPN1-212ENST00000616939 SPRR2BP35325 72 aa3.97□□□□□ -1.77
GPN1-212ENST00000616939 SPRR2AP35326 72 aa3.97□□□□□ -1.77
GPN1-212ENST00000616939 NEBP20929 6669 aa3.96□□□□□ -1.78
GPN1-212ENST00000616939 KRTAP20-1Q3LI63 56 aa3.93□□□□□ -1.78
GPN1-212ENST00000616939 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
GPN1-212ENST00000616939 MDN1Q9NU22 5596 aa3.84□□□□□ -1.79
GPN1-212ENST00000616939 SPRR2DP22532 72 aa3.8□□□□□ -1.8
GPN1-212ENST00000616939 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
GPN1-212ENST00000616939 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
GPN1-212ENST00000616939 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
GPN1-212ENST00000616939 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
GPN1-212ENST00000616939 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
GPN1-212ENST00000616939 KRTAP5-3Q6L8H2 238 aa3.41□□□□□ -1.86
GPN1-212ENST00000616939 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.87
GPN1-212ENST00000616939 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
GPN1-212ENST00000616939 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
GPN1-212ENST00000616939 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
GPN1-212ENST00000616939 LCE1DQ5T752 114 aa3.34□□□□□ -1.87
GPN1-212ENST00000616939 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
GPN1-212ENST00000616939 MT4P47944 62 aa3.27□□□□□ -1.89
GPN1-212ENST00000616939 KRTAP5-10Q6L8G5 202 aa3.27□□□□□ -1.89
GPN1-212ENST00000616939 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
GPN1-212ENST00000616939 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
GPN1-212ENST00000616939 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.89
GPN1-212ENST00000616939 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
GPN1-212ENST00000616939 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
GPN1-212ENST00000616939 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
GPN1-212ENST00000616939 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
GPN1-212ENST00000616939 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
GPN1-212ENST00000616939 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
GPN1-212ENST00000616939 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.95
GPN1-212ENST00000616939 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
GPN1-212ENST00000616939 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
GPN1-212ENST00000616939 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
GPN1-212ENST00000616939 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
GPN1-212ENST00000616939 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
GPN1-212ENST00000616939 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
GPN1-212ENST00000616939 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
GPN1-212ENST00000616939 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
GPN1-212ENST00000616939 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
GPN1-212ENST00000616939 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 5.5 ms