RNA–Protein interactions for RNA: ENST00000616683.4

RAD17-220, Transcript of RAD17 checkpoint clamp loader component, humanhuman

TSL 1 (best) BASIC

Gene RAD17, Length 3,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD17-220ENST00000616683 KRTAP4-12Q9BQ66 201 aa2.09□□□□□ -2.08
RAD17-220ENST00000616683 LCE3AQ5TA76 89 aa2.08□□□□□ -2.08
RAD17-220ENST00000616683 KRTAP19-1Q8IUB9 90 aa2.08□□□□□ -2.08
RAD17-220ENST00000616683 MUC12Q9UKN1 5478 aa2.06□□□□□ -2.08
RAD17-220ENST00000616683 KRTAP10-5P60370 271 aa2.04□□□□□ -2.08
RAD17-220ENST00000616683 DSTQ03001 7570 aaKnown RBP2.04□□□□□ -2.08
RAD17-220ENST00000616683 LCE1DQ5T752 114 aa2.03□□□□□ -2.08
RAD17-220ENST00000616683 LCE1AQ5T7P2 110 aa2.03□□□□□ -2.08
RAD17-220ENST00000616683 KRTAP19-2Q3LHN2 52 aa2.02□□□□□ -2.09
RAD17-220ENST00000616683 KRTAP4-9Q9BYQ8 210 aa2.02□□□□□ -2.09
RAD17-220ENST00000616683 KRTAP4-2Q9BYR5 136 aa2.01□□□□□ -2.09
RAD17-220ENST00000616683 KRTAP12-3P60328 96 aa2□□□□□ -2.09
RAD17-220ENST00000616683 MDN1Q9NU22 5596 aa1.99□□□□□ -2.09
RAD17-220ENST00000616683 MT2AP02795 61 aa1.98□□□□□ -2.09
RAD17-220ENST00000616683 MT1FP04733 61 aa1.98□□□□□ -2.09
RAD17-220ENST00000616683 KRTAP19-4Q3LI73 84 aa1.97□□□□□ -2.09
RAD17-220ENST00000616683 LCE5AQ5TCM9 118 aa1.97□□□□□ -2.09
RAD17-220ENST00000616683 KRTAP12-4P60329 112 aa1.96□□□□□ -2.1
RAD17-220ENST00000616683 KRTAP10-7P60409 375 aaPredicted RBP1.94□□□□□ -2.1
RAD17-220ENST00000616683 LCE3CQ5T5A8 94 aa1.93□□□□□ -2.1
RAD17-220ENST00000616683 KRTAP9-3Q9BYQ3 159 aa1.91□□□□□ -2.1
RAD17-220ENST00000616683 LCE1EQ5T753 118 aa1.91□□□□□ -2.1
RAD17-220ENST00000616683 SPRR2GQ9BYE4 73 aa1.91□□□□□ -2.1
RAD17-220ENST00000616683 KRTAP19-6Q3LI70 58 aa1.88□□□□□ -2.11
RAD17-220ENST00000616683 KRTAP4-11Q9BYQ6 195 aa1.88□□□□□ -2.11
RAD17-220ENST00000616683 SPRR2FQ96RM1 72 aa1.87□□□□□ -2.11
RAD17-220ENST00000616683 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
RAD17-220ENST00000616683 SPRR2EP22531 72 aa1.86□□□□□ -2.11
RAD17-220ENST00000616683 SPRR2BP35325 72 aa1.86□□□□□ -2.11
RAD17-220ENST00000616683 SPRR2AP35326 72 aa1.86□□□□□ -2.11
RAD17-220ENST00000616683 KRTAP9-6A8MVA2 160 aa1.85□□□□□ -2.11
RAD17-220ENST00000616683 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
RAD17-220ENST00000616683 KRTAP19-5Q3LI72 72 aa1.83□□□□□ -2.12
RAD17-220ENST00000616683 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
RAD17-220ENST00000616683 LCE4AQ5TA78 99 aa1.8□□□□□ -2.12
RAD17-220ENST00000616683 SPRR2DP22532 72 aa1.79□□□□□ -2.12
RAD17-220ENST00000616683 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
RAD17-220ENST00000616683 KRTAP5-9P26371 169 aa1.77□□□□□ -2.13
RAD17-220ENST00000616683 KRTAP19-8Q3LI54 63 aa1.76□□□□□ -2.13
RAD17-220ENST00000616683 OBSCNQ5VST9 7968 aa1.75□□□□□ -2.13
RAD17-220ENST00000616683 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
RAD17-220ENST00000616683 MT1XP80297 61 aa1.73□□□□□ -2.13
RAD17-220ENST00000616683 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
RAD17-220ENST00000616683 PRM1P04553 51 aa1.71□□□□□ -2.14
RAD17-220ENST00000616683 MT1BP07438 61 aa1.71□□□□□ -2.14
RAD17-220ENST00000616683 KRTAP5-5Q701N2 237 aaPredicted RBP1.68□□□□□ -2.14
RAD17-220ENST00000616683 MT3P25713 68 aa1.68□□□□□ -2.14
RAD17-220ENST00000616683 MT1AP04731 61 aa1.66□□□□□ -2.14
RAD17-220ENST00000616683 MT4P47944 62 aa1.66□□□□□ -2.14
RAD17-220ENST00000616683 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
RAD17-220ENST00000616683 MT1EP04732 61 aa1.63□□□□□ -2.15
RAD17-220ENST00000616683 LCE3EQ5T5B0 92 aa1.6□□□□□ -2.15
RAD17-220ENST00000616683 MT1LQ93083 61 aa1.6□□□□□ -2.15
RAD17-220ENST00000616683 SYNE1Q8NF91 8797 aaKnown RBP1.59□□□□□ -2.15
RAD17-220ENST00000616683 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
RAD17-220ENST00000616683 LCE3DQ9BYE3 92 aa1.55□□□□□ -2.16
RAD17-220ENST00000616683 KRTAP19-7Q3SYF9 63 aa1.54□□□□□ -2.16
RAD17-220ENST00000616683 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
RAD17-220ENST00000616683 KRTAP19-3Q7Z4W3 81 aa1.46□□□□□ -2.18
RAD17-220ENST00000616683 KRTAP4-3Q9BYR4 195 aa1.45□□□□□ -2.18
RAD17-220ENST00000616683 KRTAP5-4Q6L8H1 288 aa1.44□□□□□ -2.18
RAD17-220ENST00000616683 KRTAP5-8O75690 187 aa1.42□□□□□ -2.18
RAD17-220ENST00000616683 MT1GP13640 62 aa1.41□□□□□ -2.18
RAD17-220ENST00000616683 MT1MQ8N339 61 aa1.37□□□□□ -2.19
RAD17-220ENST00000616683 KRTAP20-2Q3LI61 65 aa1.33□□□□□ -2.2
RAD17-220ENST00000616683 KRTAP5-2Q701N4 177 aa1.33□□□□□ -2.2
RAD17-220ENST00000616683 KRTAP6-1Q3LI64 71 aa1.28□□□□□ -2.2
RAD17-220ENST00000616683 KRTAP4-4Q9BYR3 166 aa1.28□□□□□ -2.2
RAD17-220ENST00000616683 LCE1CQ5T751 118 aa1.27□□□□□ -2.21
RAD17-220ENST00000616683 LCE1BQ5T7P3 118 aa1.27□□□□□ -2.21
RAD17-220ENST00000616683 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
RAD17-220ENST00000616683 KRTAP5-11Q6L8G4 156 aa1.22□□□□□ -2.21
RAD17-220ENST00000616683 KRTAP5-1Q6L8H4 278 aa1.17□□□□□ -2.22
RAD17-220ENST00000616683 MUC19Q7Z5P9 8384 aa1.12□□□□□ -2.23
RAD17-220ENST00000616683 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
RAD17-220ENST00000616683 KRTAP21-2Q3LI59 83 aa0.84□□□□□ -2.28
RAD17-220ENST00000616683 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 87.2 ms