RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 KRTAP4-3Q9BYR4 195 aa7.28□□□□□ -1.24
TRAPPC3-208ENST00000616074 COX7CP15954 63 aa7.27□□□□□ -1.25
TRAPPC3-208ENST00000616074 KRTAP5-4Q6L8H1 288 aa7.25□□□□□ -1.25
TRAPPC3-208ENST00000616074 LCE3AQ5TA76 89 aa7.22□□□□□ -1.25
TRAPPC3-208ENST00000616074 C10orf95Q9H7T3 257 aa7.22□□□□□ -1.25
TRAPPC3-208ENST00000616074 KRTAP5-10Q6L8G5 202 aa7.16□□□□□ -1.26
TRAPPC3-208ENST00000616074 SMIM26A0A096LP01 95 aa7.15□□□□□ -1.26
TRAPPC3-208ENST00000616074 A8MU10 97 aa7.15□□□□□ -1.26
TRAPPC3-208ENST00000616074 TNP1P09430 55 aa7.12□□□□□ -1.27
TRAPPC3-208ENST00000616074 A0A1B0GU69 56 aa7.1□□□□□ -1.27
TRAPPC3-208ENST00000616074 H7BZZ5 65 aa7.09□□□□□ -1.27
TRAPPC3-208ENST00000616074 ATP5EP56381 51 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC3-208ENST00000616074 KRTAP4-7Q9BYR0 210 aa7.02□□□□□ -1.29
TRAPPC3-208ENST00000616074 PMAIP1Q13794 54 aa6.98□□□□□ -1.29
TRAPPC3-208ENST00000616074 KRTAP12-3P60328 96 aa6.92□□□□□ -1.3
TRAPPC3-208ENST00000616074 KRTAP5-3Q6L8H2 238 aa6.92□□□□□ -1.3
TRAPPC3-208ENST00000616074 BRK1Q8WUW1 75 aa6.92□□□□□ -1.3
TRAPPC3-208ENST00000616074 KRTAP4-12Q9BQ66 201 aa6.92□□□□□ -1.3
TRAPPC3-208ENST00000616074 KRTAP5-7Q6L8G8 165 aa6.91□□□□□ -1.3
TRAPPC3-208ENST00000616074 KRTAP20-2Q3LI61 65 aa6.87□□□□□ -1.31
TRAPPC3-208ENST00000616074 KRTAP5-5Q701N2 237 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC3-208ENST00000616074 SPRR5A0A1B0GTR4 108 aa6.78□□□□□ -1.32
TRAPPC3-208ENST00000616074 PRR15LQ9BU68 103 aa6.77□□□□□ -1.33
TRAPPC3-208ENST00000616074 SYNE1Q8NF91 8797 aaKnown RBP6.71□□□□□ -1.33
TRAPPC3-208ENST00000616074 KRTAP9-9Q9BYP9 154 aa6.71□□□□□ -1.34
TRAPPC3-208ENST00000616074 KRTAP9-4Q9BYQ2 154 aa6.71□□□□□ -1.34
TRAPPC3-208ENST00000616074 KRTAP12-4P60329 112 aa6.7□□□□□ -1.34
TRAPPC3-208ENST00000616074 KTN1-AS1Q86SY8 53 aa6.68□□□□□ -1.34
TRAPPC3-208ENST00000616074 Q1T7F1 81 aa6.67□□□□□ -1.34
TRAPPC3-208ENST00000616074 LINC01558Q9Y6Z2 57 aa6.65□□□□□ -1.34
TRAPPC3-208ENST00000616074 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
TRAPPC3-208ENST00000616074 UQCR11O14957 56 aa6.54□□□□□ -1.36
TRAPPC3-208ENST00000616074 H3BS24 57 aa6.49□□□□□ -1.37
TRAPPC3-208ENST00000616074 KRTAP19-4Q3LI73 84 aa6.46□□□□□ -1.38
TRAPPC3-208ENST00000616074 MIR22HGQ0VDD5 57 aa6.37□□□□□ -1.39
TRAPPC3-208ENST00000616074 PSPHP1O15172 72 aa6.36□□□□□ -1.39
TRAPPC3-208ENST00000616074 KRTAP15-1Q3LI76 137 aa6.35□□□□□ -1.39
TRAPPC3-208ENST00000616074 LCE3CQ5T5A8 94 aa6.34□□□□□ -1.39
TRAPPC3-208ENST00000616074 KRTAP4-11Q9BYQ6 195 aa6.34□□□□□ -1.39
TRAPPC3-208ENST00000616074 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.39
TRAPPC3-208ENST00000616074 KRTAP5-2Q701N4 177 aa6.3□□□□□ -1.4
TRAPPC3-208ENST00000616074 K7ERS5 55 aa6.29□□□□□ -1.4
TRAPPC3-208ENST00000616074 KRTAP23-1A1A580 65 aa6.27□□□□□ -1.41
TRAPPC3-208ENST00000616074 A6NED7 52 aa6.26□□□□□ -1.41
TRAPPC3-208ENST00000616074 MT1AP04731 61 aa6.26□□□□□ -1.41
TRAPPC3-208ENST00000616074 KRTAP6-1Q3LI64 71 aa6.26□□□□□ -1.41
TRAPPC3-208ENST00000616074 KRTAP5-8O75690 187 aa6.14□□□□□ -1.43
TRAPPC3-208ENST00000616074 KRTAP4-2Q9BYR5 136 aa6.09□□□□□ -1.43
TRAPPC3-208ENST00000616074 AHNAKQ09666 5890 aaKnown RBP6.09□□□□□ -1.44
TRAPPC3-208ENST00000616074 MUC5BQ9HC84 5762 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC3-208ENST00000616074 MUC5ACP98088 5654 aa6.06□□□□□ -1.44
TRAPPC3-208ENST00000616074 KRTAP9-6A8MVA2 160 aa6.03□□□□□ -1.44
TRAPPC3-208ENST00000616074 KRTAP6-2Q3LI66 62 aa6.03□□□□□ -1.44
TRAPPC3-208ENST00000616074 OBSCNQ5VST9 7968 aa6.01□□□□□ -1.45
TRAPPC3-208ENST00000616074 PRAC1Q96KF2 57 aa5.94□□□□□ -1.46
TRAPPC3-208ENST00000616074 A0A0A0MQY5 61 aa5.87□□□□□ -1.47
TRAPPC3-208ENST00000616074 ROMO1P60602 79 aa5.82□□□□□ -1.48
TRAPPC3-208ENST00000616074 MT3P25713 68 aa5.72□□□□□ -1.49
TRAPPC3-208ENST00000616074 KRTAP5-1Q6L8H4 278 aa5.71□□□□□ -1.5
TRAPPC3-208ENST00000616074 LUZP6Q538Z0 58 aa5.37□□□□□ -1.55
TRAPPC3-208ENST00000616074 NDUFAF8A1L188 74 aa5.35□□□□□ -1.55
TRAPPC3-208ENST00000616074 LCE1EQ5T753 118 aa5.33□□□□□ -1.56
TRAPPC3-208ENST00000616074 LCE1BQ5T7P3 118 aa5.07□□□□□ -1.6
TRAPPC3-208ENST00000616074 LCE1CQ5T751 118 aa4.95□□□□□ -1.62
TRAPPC3-208ENST00000616074 INE1O15225 51 aa4.61□□□□□ -1.67
TRAPPC3-208ENST00000616074 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
TRAPPC3-208ENST00000616074 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
TRAPPC3-208ENST00000616074 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC3-208ENST00000616074 LCE1FQ5T754 118 aa4.45□□□□□ -1.7
TRAPPC3-208ENST00000616074 PHGR1C9JFL3 82 aa4.18□□□□□ -1.74
TRAPPC3-208ENST00000616074 LCE3EQ5T5B0 92 aa4.18□□□□□ -1.74
TRAPPC3-208ENST00000616074 KRTAP21-2Q3LI59 83 aa4.13□□□□□ -1.75
TRAPPC3-208ENST00000616074 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
TRAPPC3-208ENST00000616074 MUC19Q7Z5P9 8384 aa3.71□□□□□ -1.81
TRAPPC3-208ENST00000616074 KRTAP21-1Q3LI58 79 aa3.16□□□□□ -1.9
TRAPPC3-208ENST00000616074 PRM1P04553 51 aa2.97□□□□□ -1.93
TRAPPC3-208ENST00000616074 MUC16Q8WXI7 14507 aa2.6□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 72.4 ms