RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.8
SENP3-EIF4A1-201ENST00000614237 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
SENP3-EIF4A1-201ENST00000614237 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
SENP3-EIF4A1-201ENST00000614237 MT1EP04732 61 aa3.82□□□□□ -1.8
SENP3-EIF4A1-201ENST00000614237 MT1LQ93083 61 aa3.79□□□□□ -1.8
SENP3-EIF4A1-201ENST00000614237 MACF1Q9UPN3 7388 aaKnown RBP3.79□□□□□ -1.8
SENP3-EIF4A1-201ENST00000614237 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
SENP3-EIF4A1-201ENST00000614237 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
SENP3-EIF4A1-201ENST00000614237 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
SENP3-EIF4A1-201ENST00000614237 KRTAP2-1Q9BYU5 128 aa3.68□□□□□ -1.82
SENP3-EIF4A1-201ENST00000614237 LOC100996750A0A140TA64 210 aa3.66□□□□□ -1.82
SENP3-EIF4A1-201ENST00000614237 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
SENP3-EIF4A1-201ENST00000614237 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.61□□□□□ -1.83
SENP3-EIF4A1-201ENST00000614237 MT1GP13640 62 aa3.61□□□□□ -1.83
SENP3-EIF4A1-201ENST00000614237 MUC12Q9UKN1 5478 aa3.6□□□□□ -1.83
SENP3-EIF4A1-201ENST00000614237 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
SENP3-EIF4A1-201ENST00000614237 MT1MQ8N339 61 aa3.56□□□□□ -1.84
SENP3-EIF4A1-201ENST00000614237 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
SENP3-EIF4A1-201ENST00000614237 LCE5AQ5TCM9 118 aa3.53□□□□□ -1.84
SENP3-EIF4A1-201ENST00000614237 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
SENP3-EIF4A1-201ENST00000614237 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
SENP3-EIF4A1-201ENST00000614237 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
SENP3-EIF4A1-201ENST00000614237 LCE3BQ5TA77 95 aa3.45□□□□□ -1.86
SENP3-EIF4A1-201ENST00000614237 SPRR2FQ96RM1 72 aa3.44□□□□□ -1.86
SENP3-EIF4A1-201ENST00000614237 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
SENP3-EIF4A1-201ENST00000614237 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
SENP3-EIF4A1-201ENST00000614237 NEBP20929 6669 aa3.33□□□□□ -1.88
SENP3-EIF4A1-201ENST00000614237 SPRR2EP22531 72 aa3.3□□□□□ -1.88
SENP3-EIF4A1-201ENST00000614237 SPRR2BP35325 72 aa3.3□□□□□ -1.88
SENP3-EIF4A1-201ENST00000614237 SPRR2AP35326 72 aa3.3□□□□□ -1.88
SENP3-EIF4A1-201ENST00000614237 LCE1AQ5T7P2 110 aa3.29□□□□□ -1.88
SENP3-EIF4A1-201ENST00000614237 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
SENP3-EIF4A1-201ENST00000614237 MT1AP04731 61 aa3.24□□□□□ -1.89
SENP3-EIF4A1-201ENST00000614237 PRM1P04553 51 aa3.19□□□□□ -1.9
SENP3-EIF4A1-201ENST00000614237 SPRR2DP22532 72 aa3.16□□□□□ -1.9
SENP3-EIF4A1-201ENST00000614237 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
SENP3-EIF4A1-201ENST00000614237 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
SENP3-EIF4A1-201ENST00000614237 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
SENP3-EIF4A1-201ENST00000614237 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
SENP3-EIF4A1-201ENST00000614237 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
SENP3-EIF4A1-201ENST00000614237 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
SENP3-EIF4A1-201ENST00000614237 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
SENP3-EIF4A1-201ENST00000614237 KRTAP2-2Q9BYT5 123 aa2.96□□□□□ -1.94
SENP3-EIF4A1-201ENST00000614237 KRTAP6-2Q3LI66 62 aa2.94□□□□□ -1.94
SENP3-EIF4A1-201ENST00000614237 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
SENP3-EIF4A1-201ENST00000614237 MT3P25713 68 aa2.89□□□□□ -1.95
SENP3-EIF4A1-201ENST00000614237 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
SENP3-EIF4A1-201ENST00000614237 MT4P47944 62 aa2.82□□□□□ -1.96
SENP3-EIF4A1-201ENST00000614237 LCE4AQ5TA78 99 aa2.8□□□□□ -1.96
SENP3-EIF4A1-201ENST00000614237 HMCN1Q96RW7 5635 aa2.78□□□□□ -1.97
SENP3-EIF4A1-201ENST00000614237 KRTAP4-6Q9BYQ5 205 aa2.77□□□□□ -1.97
SENP3-EIF4A1-201ENST00000614237 LCE1DQ5T752 114 aa2.77□□□□□ -1.97
SENP3-EIF4A1-201ENST00000614237 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
SENP3-EIF4A1-201ENST00000614237 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
SENP3-EIF4A1-201ENST00000614237 KRTAP5-3Q6L8H2 238 aa2.63□□□□□ -1.99
SENP3-EIF4A1-201ENST00000614237 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
SENP3-EIF4A1-201ENST00000614237 KRTAP4-11Q9BYQ6 195 aa2.49□□□□□ -2.01
SENP3-EIF4A1-201ENST00000614237 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
SENP3-EIF4A1-201ENST00000614237 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
SENP3-EIF4A1-201ENST00000614237 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
SENP3-EIF4A1-201ENST00000614237 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
SENP3-EIF4A1-201ENST00000614237 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
SENP3-EIF4A1-201ENST00000614237 MUC5ACP98088 5654 aa2.34□□□□□ -2.03
SENP3-EIF4A1-201ENST00000614237 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
SENP3-EIF4A1-201ENST00000614237 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.04
SENP3-EIF4A1-201ENST00000614237 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
SENP3-EIF4A1-201ENST00000614237 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
SENP3-EIF4A1-201ENST00000614237 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
SENP3-EIF4A1-201ENST00000614237 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
SENP3-EIF4A1-201ENST00000614237 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
SENP3-EIF4A1-201ENST00000614237 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
SENP3-EIF4A1-201ENST00000614237 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
SENP3-EIF4A1-201ENST00000614237 KRTAP4-12Q9BQ66 201 aa2.01□□□□□ -2.09
SENP3-EIF4A1-201ENST00000614237 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
SENP3-EIF4A1-201ENST00000614237 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
SENP3-EIF4A1-201ENST00000614237 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
SENP3-EIF4A1-201ENST00000614237 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 72.6 ms