RNA–Protein interactions for RNA: ENST00000613258.4

NUP153-203, Transcript of nucleoporin 153, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NUP153, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP153-203ENST00000613258 MT1MQ8N339 61 aa4.52□□□□□ -1.69
NUP153-203ENST00000613258 KRTAP9-6A0A140TA67 174 aa4.51□□□□□ -1.69
NUP153-203ENST00000613258 MT4P47944 62 aa4.5□□□□□ -1.69
NUP153-203ENST00000613258 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
NUP153-203ENST00000613258 LOC100996750A0A140TA64 210 aa4.5□□□□□ -1.69
NUP153-203ENST00000613258 KRTAP4-3Q9BYR4 195 aa4.5□□□□□ -1.69
NUP153-203ENST00000613258 HMCN2Q8NDA2 5059 aa4.47□□□□□ -1.69
NUP153-203ENST00000613258 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
NUP153-203ENST00000613258 UBR4Q5T4S7 5183 aa4.42□□□□□ -1.7
NUP153-203ENST00000613258 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.7
NUP153-203ENST00000613258 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
NUP153-203ENST00000613258 MT3P25713 68 aa4.27□□□□□ -1.73
NUP153-203ENST00000613258 MUC2Q02817 5179 aa4.26□□□□□ -1.73
NUP153-203ENST00000613258 KRTAP9-7A8MTY7 169 aa4.23□□□□□ -1.73
NUP153-203ENST00000613258 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
NUP153-203ENST00000613258 SYNE2Q8WXH0 6885 aaKnown RBP4.16□□□□□ -1.74
NUP153-203ENST00000613258 PRM1P04553 51 aa4.16□□□□□ -1.74
NUP153-203ENST00000613258 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.14□□□□□ -1.75
NUP153-203ENST00000613258 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
NUP153-203ENST00000613258 LCE1DQ5T752 114 aa4.13□□□□□ -1.75
NUP153-203ENST00000613258 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
NUP153-203ENST00000613258 MT1AP04731 61 aa4.11□□□□□ -1.75
NUP153-203ENST00000613258 KRTAP4-9Q9BYQ8 210 aa4.08□□□□□ -1.76
NUP153-203ENST00000613258 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
NUP153-203ENST00000613258 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
NUP153-203ENST00000613258 KRTAP2-1Q9BYU5 128 aa4.02□□□□□ -1.77
NUP153-203ENST00000613258 LCE1AQ5T7P2 110 aa4□□□□□ -1.77
NUP153-203ENST00000613258 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
NUP153-203ENST00000613258 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.78
NUP153-203ENST00000613258 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
NUP153-203ENST00000613258 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.78
NUP153-203ENST00000613258 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
NUP153-203ENST00000613258 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
NUP153-203ENST00000613258 LCE4AQ5TA78 99 aa3.84□□□□□ -1.79
NUP153-203ENST00000613258 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
NUP153-203ENST00000613258 USH2AO75445 5202 aa3.81□□□□□ -1.8
NUP153-203ENST00000613258 KMT2DO14686 5537 aa3.75□□□□□ -1.81
NUP153-203ENST00000613258 MACF1Q9UPN3 7388 aaKnown RBP3.71□□□□□ -1.82
NUP153-203ENST00000613258 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
NUP153-203ENST00000613258 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
NUP153-203ENST00000613258 SSPOA2VEC9 5147 aa3.56□□□□□ -1.84
NUP153-203ENST00000613258 NEBP20929 6669 aa3.52□□□□□ -1.85
NUP153-203ENST00000613258 FCGBPQ9Y6R7 5405 aaPredicted RBP3.51□□□□□ -1.85
NUP153-203ENST00000613258 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
NUP153-203ENST00000613258 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
NUP153-203ENST00000613258 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
NUP153-203ENST00000613258 DSTQ03001 7570 aaKnown RBP3.46□□□□□ -1.86
NUP153-203ENST00000613258 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
NUP153-203ENST00000613258 MUC12Q9UKN1 5478 aa3.35□□□□□ -1.87
NUP153-203ENST00000613258 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.88
NUP153-203ENST00000613258 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
NUP153-203ENST00000613258 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
NUP153-203ENST00000613258 KRTAP4-11Q9BYQ6 195 aa3.1□□□□□ -1.91
NUP153-203ENST00000613258 MDN1Q9NU22 5596 aa3.02□□□□□ -1.93
NUP153-203ENST00000613258 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
NUP153-203ENST00000613258 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
NUP153-203ENST00000613258 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
NUP153-203ENST00000613258 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
NUP153-203ENST00000613258 KRTAP5-3Q6L8H2 238 aa2.74□□□□□ -1.97
NUP153-203ENST00000613258 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
NUP153-203ENST00000613258 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
NUP153-203ENST00000613258 MUC5ACP98088 5654 aa2.57□□□□□ -2
NUP153-203ENST00000613258 KRTAP5-8O75690 187 aa2.55□□□□□ -2
NUP153-203ENST00000613258 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
NUP153-203ENST00000613258 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
NUP153-203ENST00000613258 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
NUP153-203ENST00000613258 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
NUP153-203ENST00000613258 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
NUP153-203ENST00000613258 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
NUP153-203ENST00000613258 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
NUP153-203ENST00000613258 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
NUP153-203ENST00000613258 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
NUP153-203ENST00000613258 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
NUP153-203ENST00000613258 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
NUP153-203ENST00000613258 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
NUP153-203ENST00000613258 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
NUP153-203ENST00000613258 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 10.2 ms