RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
TSKU-205ENST00000612930 KRTAP4-3Q9BYR4 195 aa5.29□□□□□ -1.56
TSKU-205ENST00000612930 MT1GP13640 62 aa5.25□□□□□ -1.57
TSKU-205ENST00000612930 SSPOA2VEC9 5147 aa5.14□□□□□ -1.59
TSKU-205ENST00000612930 CRCT1Q9UGL9 99 aa5.13□□□□□ -1.59
TSKU-205ENST00000612930 MT1MQ8N339 61 aa5.1□□□□□ -1.59
TSKU-205ENST00000612930 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
TSKU-205ENST00000612930 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
TSKU-205ENST00000612930 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
TSKU-205ENST00000612930 KRTAP9-2Q9BYQ4 174 aa5.02□□□□□ -1.61
TSKU-205ENST00000612930 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
TSKU-205ENST00000612930 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
TSKU-205ENST00000612930 FCGBPQ9Y6R7 5405 aaPredicted RBP4.98□□□□□ -1.61
TSKU-205ENST00000612930 LCE3BQ5TA77 95 aa4.96□□□□□ -1.62
TSKU-205ENST00000612930 KRTAP9-9Q9BYP9 154 aa4.96□□□□□ -1.62
TSKU-205ENST00000612930 MUC12Q9UKN1 5478 aa4.96□□□□□ -1.62
TSKU-205ENST00000612930 KRTAP19-6Q3LI70 58 aa4.94□□□□□ -1.62
TSKU-205ENST00000612930 KRTAP9-6A0A140TA67 174 aa4.92□□□□□ -1.62
TSKU-205ENST00000612930 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
TSKU-205ENST00000612930 MT1AP04731 61 aa4.87□□□□□ -1.63
TSKU-205ENST00000612930 SYNE1Q8NF91 8797 aaKnown RBP4.81□□□□□ -1.64
TSKU-205ENST00000612930 KRTAP5-5Q701N2 237 aaPredicted RBP4.8□□□□□ -1.64
TSKU-205ENST00000612930 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
TSKU-205ENST00000612930 PRM1P04553 51 aa4.78□□□□□ -1.64
TSKU-205ENST00000612930 LCE3DQ9BYE3 92 aa4.78□□□□□ -1.64
TSKU-205ENST00000612930 KRTAP6-1Q3LI64 71 aa4.75□□□□□ -1.65
TSKU-205ENST00000612930 LCE3EQ5T5B0 92 aa4.75□□□□□ -1.65
TSKU-205ENST00000612930 MACF1Q9UPN3 7388 aaKnown RBP4.73□□□□□ -1.65
TSKU-205ENST00000612930 SYNE2Q8WXH0 6885 aaKnown RBP4.7□□□□□ -1.66
TSKU-205ENST00000612930 LCE1FQ5T754 118 aa4.62□□□□□ -1.67
TSKU-205ENST00000612930 SPRR2FQ96RM1 72 aa4.62□□□□□ -1.67
TSKU-205ENST00000612930 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
TSKU-205ENST00000612930 KRTAP6-3Q3LI67 103 aa4.47□□□□□ -1.69
TSKU-205ENST00000612930 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.46□□□□□ -1.7
TSKU-205ENST00000612930 MDN1Q9NU22 5596 aa4.44□□□□□ -1.7
TSKU-205ENST00000612930 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
TSKU-205ENST00000612930 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
TSKU-205ENST00000612930 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
TSKU-205ENST00000612930 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
TSKU-205ENST00000612930 SPRR2EP22531 72 aa4.2□□□□□ -1.74
TSKU-205ENST00000612930 SPRR2BP35325 72 aa4.2□□□□□ -1.74
TSKU-205ENST00000612930 SPRR2AP35326 72 aa4.2□□□□□ -1.74
TSKU-205ENST00000612930 MT3P25713 68 aa4.11□□□□□ -1.75
TSKU-205ENST00000612930 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
TSKU-205ENST00000612930 NEBP20929 6669 aa4.05□□□□□ -1.76
TSKU-205ENST00000612930 SPRR2DP22532 72 aa4.03□□□□□ -1.76
TSKU-205ENST00000612930 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
TSKU-205ENST00000612930 LCE1DQ5T752 114 aa3.85□□□□□ -1.79
TSKU-205ENST00000612930 KRTAP20-1Q3LI63 56 aa3.7□□□□□ -1.82
TSKU-205ENST00000612930 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
TSKU-205ENST00000612930 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
TSKU-205ENST00000612930 MT4P47944 62 aa3.58□□□□□ -1.84
TSKU-205ENST00000612930 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
TSKU-205ENST00000612930 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
TSKU-205ENST00000612930 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
TSKU-205ENST00000612930 HMCN1Q96RW7 5635 aa3.51□□□□□ -1.85
TSKU-205ENST00000612930 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
TSKU-205ENST00000612930 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
TSKU-205ENST00000612930 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.88
TSKU-205ENST00000612930 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
TSKU-205ENST00000612930 KRTAP5-3Q6L8H2 238 aa3.27□□□□□ -1.89
TSKU-205ENST00000612930 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
TSKU-205ENST00000612930 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
TSKU-205ENST00000612930 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
TSKU-205ENST00000612930 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
TSKU-205ENST00000612930 KRTAP21-1Q3LI58 79 aa3.05□□□□□ -1.92
TSKU-205ENST00000612930 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
TSKU-205ENST00000612930 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
TSKU-205ENST00000612930 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
TSKU-205ENST00000612930 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
TSKU-205ENST00000612930 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
TSKU-205ENST00000612930 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
TSKU-205ENST00000612930 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
TSKU-205ENST00000612930 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
TSKU-205ENST00000612930 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
TSKU-205ENST00000612930 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
TSKU-205ENST00000612930 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms