RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 C10orf95Q9H7T3 257 aa6.19□□□□□ -1.42
PRKN-209ENST00000612485 MIR22HGQ0VDD5 57 aa6.18□□□□□ -1.42
PRKN-209ENST00000612485 K7ERS5 55 aa6.17□□□□□ -1.42
PRKN-209ENST00000612485 TNP1P09430 55 aa6.17□□□□□ -1.42
PRKN-209ENST00000612485 MT1MQ8N339 61 aa6.17□□□□□ -1.42
PRKN-209ENST00000612485 MT1LQ93083 61 aa6.16□□□□□ -1.42
PRKN-209ENST00000612485 LCE3AQ5TA76 89 aa6.14□□□□□ -1.43
PRKN-209ENST00000612485 LCE1DQ5T752 114 aa6.1□□□□□ -1.43
PRKN-209ENST00000612485 LCE4AQ5TA78 99 aa6.1□□□□□ -1.43
PRKN-209ENST00000612485 A6NED7 52 aa6.05□□□□□ -1.44
PRKN-209ENST00000612485 HMCN1Q96RW7 5635 aa6.03□□□□□ -1.44
PRKN-209ENST00000612485 MT4P47944 62 aa6.02□□□□□ -1.45
PRKN-209ENST00000612485 KRTAP4-3Q9BYR4 195 aa6□□□□□ -1.45
PRKN-209ENST00000612485 KRTAP5-4Q6L8H1 288 aa5.94□□□□□ -1.46
PRKN-209ENST00000612485 KRTAP12-3P60328 96 aa5.92□□□□□ -1.46
PRKN-209ENST00000612485 KRTAP25-1Q3LHN0 102 aa5.86□□□□□ -1.47
PRKN-209ENST00000612485 AHNAK2Q8IVF2 5795 aa5.84□□□□□ -1.47
PRKN-209ENST00000612485 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
PRKN-209ENST00000612485 KRTAP4-6Q9BYQ5 205 aa5.82□□□□□ -1.48
PRKN-209ENST00000612485 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
PRKN-209ENST00000612485 KRTAP5-10Q6L8G5 202 aa5.71□□□□□ -1.5
PRKN-209ENST00000612485 KRTAP23-1A1A580 65 aa5.68□□□□□ -1.5
PRKN-209ENST00000612485 ROMO1P60602 79 aa5.66□□□□□ -1.5
PRKN-209ENST00000612485 KRTAP5-5Q701N2 237 aaPredicted RBP5.66□□□□□ -1.5
PRKN-209ENST00000612485 KRTAP20-2Q3LI61 65 aa5.62□□□□□ -1.51
PRKN-209ENST00000612485 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
PRKN-209ENST00000612485 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
PRKN-209ENST00000612485 KRTAP12-4P60329 112 aa5.58□□□□□ -1.52
PRKN-209ENST00000612485 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
PRKN-209ENST00000612485 LOC100996750A0A140TA64 210 aa5.53□□□□□ -1.52
PRKN-209ENST00000612485 KRTAP5-7Q6L8G8 165 aa5.52□□□□□ -1.53
PRKN-209ENST00000612485 KRTAP15-1Q3LI76 137 aa5.5□□□□□ -1.53
PRKN-209ENST00000612485 BRK1Q8WUW1 75 aa5.5□□□□□ -1.53
PRKN-209ENST00000612485 SYNE1Q8NF91 8797 aaKnown RBP5.49□□□□□ -1.53
PRKN-209ENST00000612485 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
PRKN-209ENST00000612485 MT1AP04731 61 aa5.25□□□□□ -1.57
PRKN-209ENST00000612485 PMAIP1Q13794 54 aa5.25□□□□□ -1.57
PRKN-209ENST00000612485 KRTAP6-1Q3LI64 71 aa5.21□□□□□ -1.58
PRKN-209ENST00000612485 KRTAP5-2Q701N4 177 aa5.19□□□□□ -1.58
PRKN-209ENST00000612485 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.59
PRKN-209ENST00000612485 PRO0628Q9UI54 55 aa5.1□□□□□ -1.59
PRKN-209ENST00000612485 KRTAP9-6A8MVA2 160 aa5.09□□□□□ -1.59
PRKN-209ENST00000612485 KRTAP9-4Q9BYQ2 154 aa5.09□□□□□ -1.59
PRKN-209ENST00000612485 KRTAP6-2Q3LI66 62 aa5.01□□□□□ -1.61
PRKN-209ENST00000612485 KRTAP5-8O75690 187 aa4.97□□□□□ -1.61
PRKN-209ENST00000612485 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
PRKN-209ENST00000612485 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
PRKN-209ENST00000612485 MUC5BQ9HC84 5762 aaPredicted RBP4.84□□□□□ -1.63
PRKN-209ENST00000612485 MT3P25713 68 aa4.83□□□□□ -1.64
PRKN-209ENST00000612485 AHNAKQ09666 5890 aaKnown RBP4.83□□□□□ -1.64
PRKN-209ENST00000612485 KTN1-AS1Q86SY8 53 aa4.79□□□□□ -1.64
PRKN-209ENST00000612485 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
PRKN-209ENST00000612485 KRTAP9-9Q9BYP9 154 aa4.77□□□□□ -1.65
PRKN-209ENST00000612485 KRTAP5-1Q6L8H4 278 aa4.66□□□□□ -1.66
PRKN-209ENST00000612485 SVIPQ8NHG7 77 aa4.57□□□□□ -1.68
PRKN-209ENST00000612485 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
PRKN-209ENST00000612485 LUZP6Q538Z0 58 aa4.31□□□□□ -1.72
PRKN-209ENST00000612485 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
PRKN-209ENST00000612485 KRTAP4-2Q9BYR5 136 aa4.19□□□□□ -1.74
PRKN-209ENST00000612485 LCE1CQ5T751 118 aa4.13□□□□□ -1.75
PRKN-209ENST00000612485 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
PRKN-209ENST00000612485 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
PRKN-209ENST00000612485 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
PRKN-209ENST00000612485 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.74□□□□□ -1.81
PRKN-209ENST00000612485 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
PRKN-209ENST00000612485 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
PRKN-209ENST00000612485 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
PRKN-209ENST00000612485 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
PRKN-209ENST00000612485 PHGR1C9JFL3 82 aa3.34□□□□□ -1.87
PRKN-209ENST00000612485 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
PRKN-209ENST00000612485 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
PRKN-209ENST00000612485 INE1O15225 51 aa3.08□□□□□ -1.92
PRKN-209ENST00000612485 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
PRKN-209ENST00000612485 PRM1P04553 51 aa2.92□□□□□ -1.94
PRKN-209ENST00000612485 H3BS24 57 aa2.66□□□□□ -1.98
PRKN-209ENST00000612485 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
PRKN-209ENST00000612485 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 131.8 ms