RNA–Protein interactions for RNA: ENST00000612233.1

NOP56-219, Transcript of NOP56 ribonucleoprotein, humanhuman

Gene NOP56, Length 2,980 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-219ENST00000612233 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
NOP56-219ENST00000612233 MT1GP13640 62 aa4.63□□□□□ -1.67
NOP56-219ENST00000612233 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
NOP56-219ENST00000612233 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
NOP56-219ENST00000612233 KRTAP19-3Q7Z4W3 81 aa4.6□□□□□ -1.67
NOP56-219ENST00000612233 LCE5AQ5TCM9 118 aa4.59□□□□□ -1.68
NOP56-219ENST00000612233 MT1MQ8N339 61 aa4.55□□□□□ -1.68
NOP56-219ENST00000612233 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
NOP56-219ENST00000612233 KMT2DO14686 5537 aa4.52□□□□□ -1.69
NOP56-219ENST00000612233 LCE1FQ5T754 118 aa4.5□□□□□ -1.69
NOP56-219ENST00000612233 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
NOP56-219ENST00000612233 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
NOP56-219ENST00000612233 KRTAP9-2Q9BYQ4 174 aa4.39□□□□□ -1.71
NOP56-219ENST00000612233 FCGBPQ9Y6R7 5405 aaPredicted RBP4.39□□□□□ -1.71
NOP56-219ENST00000612233 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
NOP56-219ENST00000612233 KRTAP12-4P60329 112 aa4.34□□□□□ -1.72
NOP56-219ENST00000612233 SPRR2FQ96RM1 72 aa4.31□□□□□ -1.72
NOP56-219ENST00000612233 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
NOP56-219ENST00000612233 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
NOP56-219ENST00000612233 CRCT1Q9UGL9 99 aa4.19□□□□□ -1.74
NOP56-219ENST00000612233 MT1AP04731 61 aa4.17□□□□□ -1.74
NOP56-219ENST00000612233 KRTAP5-5Q701N2 237 aaPredicted RBP4.15□□□□□ -1.74
NOP56-219ENST00000612233 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
NOP56-219ENST00000612233 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
NOP56-219ENST00000612233 SPRR2EP22531 72 aa4.01□□□□□ -1.77
NOP56-219ENST00000612233 SPRR2BP35325 72 aa4.01□□□□□ -1.77
NOP56-219ENST00000612233 SPRR2AP35326 72 aa4.01□□□□□ -1.77
NOP56-219ENST00000612233 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
NOP56-219ENST00000612233 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
NOP56-219ENST00000612233 FSIP2Q5CZC0 6907 aa3.95□□□□□ -1.78
NOP56-219ENST00000612233 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
NOP56-219ENST00000612233 KRTAP9-7A8MTY7 169 aa3.93□□□□□ -1.78
NOP56-219ENST00000612233 LCE3BQ5TA77 95 aa3.9□□□□□ -1.78
NOP56-219ENST00000612233 PRM1P04553 51 aa3.88□□□□□ -1.79
NOP56-219ENST00000612233 SPRR2DP22532 72 aa3.87□□□□□ -1.79
NOP56-219ENST00000612233 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
NOP56-219ENST00000612233 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.79
NOP56-219ENST00000612233 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
NOP56-219ENST00000612233 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
NOP56-219ENST00000612233 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
NOP56-219ENST00000612233 MT3P25713 68 aa3.72□□□□□ -1.81
NOP56-219ENST00000612233 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.82
NOP56-219ENST00000612233 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
NOP56-219ENST00000612233 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
NOP56-219ENST00000612233 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
NOP56-219ENST00000612233 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
NOP56-219ENST00000612233 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.84
NOP56-219ENST00000612233 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
NOP56-219ENST00000612233 NEBP20929 6669 aa3.53□□□□□ -1.84
NOP56-219ENST00000612233 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
NOP56-219ENST00000612233 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
NOP56-219ENST00000612233 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
NOP56-219ENST00000612233 KRTAP5-3Q6L8H2 238 aa3.33□□□□□ -1.88
NOP56-219ENST00000612233 KRTAP4-6Q9BYQ5 205 aa3.32□□□□□ -1.88
NOP56-219ENST00000612233 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
NOP56-219ENST00000612233 MT4P47944 62 aa3.22□□□□□ -1.89
NOP56-219ENST00000612233 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
NOP56-219ENST00000612233 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
NOP56-219ENST00000612233 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
NOP56-219ENST00000612233 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
NOP56-219ENST00000612233 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
NOP56-219ENST00000612233 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
NOP56-219ENST00000612233 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
NOP56-219ENST00000612233 KRTAP5-7Q6L8G8 165 aa2.92□□□□□ -1.94
NOP56-219ENST00000612233 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
NOP56-219ENST00000612233 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
NOP56-219ENST00000612233 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.94
NOP56-219ENST00000612233 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
NOP56-219ENST00000612233 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
NOP56-219ENST00000612233 AHNAK2Q8IVF2 5795 aa2.64□□□□□ -1.99
NOP56-219ENST00000612233 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
NOP56-219ENST00000612233 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
NOP56-219ENST00000612233 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
NOP56-219ENST00000612233 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
NOP56-219ENST00000612233 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
NOP56-219ENST00000612233 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
NOP56-219ENST00000612233 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
NOP56-219ENST00000612233 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms