RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 MT1XP80297 61 aa3.37□□□□□ -1.87
TARDBP-213ENST00000611963 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
TARDBP-213ENST00000611963 KRTAP6-3Q3LI67 103 aa3.32□□□□□ -1.88
TARDBP-213ENST00000611963 MT3P25713 68 aa3.29□□□□□ -1.88
TARDBP-213ENST00000611963 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
TARDBP-213ENST00000611963 PRAC1Q96KF2 57 aa3.29□□□□□ -1.88
TARDBP-213ENST00000611963 PRO2289Q9P1D8 64 aa3.29□□□□□ -1.88
TARDBP-213ENST00000611963 MUC12Q9UKN1 5478 aa3.28□□□□□ -1.88
TARDBP-213ENST00000611963 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
TARDBP-213ENST00000611963 NEBP20929 6669 aa3.25□□□□□ -1.89
TARDBP-213ENST00000611963 TNP1P09430 55 aa3.25□□□□□ -1.89
TARDBP-213ENST00000611963 KRTAP25-1Q3LHN0 102 aa3.25□□□□□ -1.89
TARDBP-213ENST00000611963 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
TARDBP-213ENST00000611963 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
TARDBP-213ENST00000611963 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
TARDBP-213ENST00000611963 KRTAP10-12P60413 245 aa3.17□□□□□ -1.9
TARDBP-213ENST00000611963 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
TARDBP-213ENST00000611963 KMT2DO14686 5537 aa3.17□□□□□ -1.9
TARDBP-213ENST00000611963 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
TARDBP-213ENST00000611963 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
TARDBP-213ENST00000611963 PP632Q6XCG6 107 aa3.1□□□□□ -1.91
TARDBP-213ENST00000611963 SPRR2FQ96RM1 72 aa3.06□□□□□ -1.92
TARDBP-213ENST00000611963 LCE3CQ5T5A8 94 aa3.05□□□□□ -1.92
TARDBP-213ENST00000611963 KRTAP8-1Q8IUC2 63 aa3.05□□□□□ -1.92
TARDBP-213ENST00000611963 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
TARDBP-213ENST00000611963 KRTAP19-5Q3LI72 72 aa3.04□□□□□ -1.92
TARDBP-213ENST00000611963 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
TARDBP-213ENST00000611963 SPRR2EP22531 72 aa3.02□□□□□ -1.93
TARDBP-213ENST00000611963 SPRR2BP35325 72 aa3.02□□□□□ -1.93
TARDBP-213ENST00000611963 SPRR2AP35326 72 aa3.02□□□□□ -1.93
TARDBP-213ENST00000611963 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
TARDBP-213ENST00000611963 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
TARDBP-213ENST00000611963 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
TARDBP-213ENST00000611963 MT1EP04732 61 aa2.95□□□□□ -1.94
TARDBP-213ENST00000611963 KRTAP2-1Q9BYU5 128 aa2.93□□□□□ -1.94
TARDBP-213ENST00000611963 SPRR2DP22532 72 aa2.91□□□□□ -1.94
TARDBP-213ENST00000611963 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
TARDBP-213ENST00000611963 MT1LQ93083 61 aa2.88□□□□□ -1.95
TARDBP-213ENST00000611963 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
TARDBP-213ENST00000611963 KRTAP19-3Q7Z4W3 81 aa2.83□□□□□ -1.96
TARDBP-213ENST00000611963 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
TARDBP-213ENST00000611963 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
TARDBP-213ENST00000611963 MT1GP13640 62 aa2.78□□□□□ -1.96
TARDBP-213ENST00000611963 MT1MQ8N339 61 aa2.78□□□□□ -1.96
TARDBP-213ENST00000611963 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
TARDBP-213ENST00000611963 KRTAP4-3Q9BYR4 195 aa2.76□□□□□ -1.97
TARDBP-213ENST00000611963 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
TARDBP-213ENST00000611963 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
TARDBP-213ENST00000611963 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
TARDBP-213ENST00000611963 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
TARDBP-213ENST00000611963 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
TARDBP-213ENST00000611963 MT4P47944 62 aa2.56□□□□□ -2
TARDBP-213ENST00000611963 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
TARDBP-213ENST00000611963 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
TARDBP-213ENST00000611963 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
TARDBP-213ENST00000611963 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
TARDBP-213ENST00000611963 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
TARDBP-213ENST00000611963 MT1AP04731 61 aa2.44□□□□□ -2.02
TARDBP-213ENST00000611963 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
TARDBP-213ENST00000611963 SYNE1Q8NF91 8797 aaKnown RBP2.42□□□□□ -2.02
TARDBP-213ENST00000611963 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
TARDBP-213ENST00000611963 KRTAP12-4P60329 112 aa2.35□□□□□ -2.03
TARDBP-213ENST00000611963 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
TARDBP-213ENST00000611963 KRTAP6-2Q3LI66 62 aa2.25□□□□□ -2.05
TARDBP-213ENST00000611963 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
TARDBP-213ENST00000611963 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
TARDBP-213ENST00000611963 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
TARDBP-213ENST00000611963 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
TARDBP-213ENST00000611963 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
TARDBP-213ENST00000611963 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
TARDBP-213ENST00000611963 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
TARDBP-213ENST00000611963 INE1O15225 51 aa2.07□□□□□ -2.08
TARDBP-213ENST00000611963 PRM1P04553 51 aa1.78□□□□□ -2.12
TARDBP-213ENST00000611963 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
TARDBP-213ENST00000611963 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
TARDBP-213ENST00000611963 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
TARDBP-213ENST00000611963 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
TARDBP-213ENST00000611963 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms