RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 MUC17Q685J3 4493 aa4.88□□□□□ -1.63
TNXB-208ENST00000611016 ABCA13Q86UQ4 5058 aa4.86□□□□□ -1.63
TNXB-208ENST00000611016 LOC100996750A0A140TA64 210 aa4.84□□□□□ -1.64
TNXB-208ENST00000611016 KRTAP4-3Q9BYR4 195 aa4.81□□□□□ -1.64
TNXB-208ENST00000611016 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
TNXB-208ENST00000611016 LCE2AQ5TA79 106 aaPredicted RBP4.77□□□□□ -1.65
TNXB-208ENST00000611016 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
TNXB-208ENST00000611016 FAT4Q6V0I7 4981 aa4.69□□□□□ -1.66
TNXB-208ENST00000611016 LCE1DQ5T752 114 aa4.68□□□□□ -1.66
TNXB-208ENST00000611016 FSIP2Q5CZC0 6907 aa4.67□□□□□ -1.66
TNXB-208ENST00000611016 RNF213Q63HN8 5207 aa4.64□□□□□ -1.67
TNXB-208ENST00000611016 PRM1P04553 51 aa4.63□□□□□ -1.67
TNXB-208ENST00000611016 KRTAP19-7Q3SYF9 63 aa4.62□□□□□ -1.67
TNXB-208ENST00000611016 MT1AP04731 61 aa4.62□□□□□ -1.67
TNXB-208ENST00000611016 UBR4Q5T4S7 5183 aa4.6□□□□□ -1.67
TNXB-208ENST00000611016 HMCN2Q8NDA2 5059 aa4.57□□□□□ -1.68
TNXB-208ENST00000611016 KRTAP20-1Q3LI63 56 aa4.56□□□□□ -1.68
TNXB-208ENST00000611016 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
TNXB-208ENST00000611016 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
TNXB-208ENST00000611016 KRTAP2-1Q9BYU5 128 aa4.54□□□□□ -1.68
TNXB-208ENST00000611016 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
TNXB-208ENST00000611016 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
TNXB-208ENST00000611016 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.7
TNXB-208ENST00000611016 MUC2Q02817 5179 aa4.45□□□□□ -1.7
TNXB-208ENST00000611016 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
TNXB-208ENST00000611016 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
TNXB-208ENST00000611016 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
TNXB-208ENST00000611016 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
TNXB-208ENST00000611016 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.34□□□□□ -1.71
TNXB-208ENST00000611016 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
TNXB-208ENST00000611016 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.73
TNXB-208ENST00000611016 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
TNXB-208ENST00000611016 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
TNXB-208ENST00000611016 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.73
TNXB-208ENST00000611016 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
TNXB-208ENST00000611016 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.74
TNXB-208ENST00000611016 LCE1CQ5T751 118 aa4.03□□□□□ -1.77
TNXB-208ENST00000611016 LCE1EQ5T753 118 aa4.03□□□□□ -1.77
TNXB-208ENST00000611016 LCE1FQ5T754 118 aa4.03□□□□□ -1.77
TNXB-208ENST00000611016 USH2AO75445 5202 aa3.91□□□□□ -1.78
TNXB-208ENST00000611016 FCGBPQ9Y6R7 5405 aaPredicted RBP3.83□□□□□ -1.8
TNXB-208ENST00000611016 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
TNXB-208ENST00000611016 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
TNXB-208ENST00000611016 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
TNXB-208ENST00000611016 KMT2DO14686 5537 aa3.7□□□□□ -1.82
TNXB-208ENST00000611016 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
TNXB-208ENST00000611016 NEBP20929 6669 aa3.69□□□□□ -1.82
TNXB-208ENST00000611016 KRTAP4-6Q9BYQ5 205 aa3.64□□□□□ -1.83
TNXB-208ENST00000611016 SSPOA2VEC9 5147 aa3.6□□□□□ -1.83
TNXB-208ENST00000611016 KRTAP20-2Q3LI61 65 aa3.55□□□□□ -1.84
TNXB-208ENST00000611016 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
TNXB-208ENST00000611016 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
TNXB-208ENST00000611016 MDN1Q9NU22 5596 aa3.33□□□□□ -1.88
TNXB-208ENST00000611016 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
TNXB-208ENST00000611016 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
TNXB-208ENST00000611016 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
TNXB-208ENST00000611016 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
TNXB-208ENST00000611016 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
TNXB-208ENST00000611016 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
TNXB-208ENST00000611016 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.89
TNXB-208ENST00000611016 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
TNXB-208ENST00000611016 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
TNXB-208ENST00000611016 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
TNXB-208ENST00000611016 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
TNXB-208ENST00000611016 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
TNXB-208ENST00000611016 KRTAP5-10Q6L8G5 202 aa2.53□□□□□ -2
TNXB-208ENST00000611016 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
TNXB-208ENST00000611016 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
TNXB-208ENST00000611016 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
TNXB-208ENST00000611016 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
TNXB-208ENST00000611016 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
TNXB-208ENST00000611016 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
TNXB-208ENST00000611016 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
TNXB-208ENST00000611016 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
TNXB-208ENST00000611016 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
TNXB-208ENST00000611016 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
TNXB-208ENST00000611016 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 66.1 ms