RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 KRTAP19-6Q3LI70 58 aa7.51□□□□□ -1.21
SHANK2-220ENST00000608988 FSIP2Q5CZC0 6907 aa7.48□□□□□ -1.21
SHANK2-220ENST00000608988 KMT2DO14686 5537 aa7.37□□□□□ -1.23
SHANK2-220ENST00000608988 FCGBPQ9Y6R7 5405 aaPredicted RBP7.31□□□□□ -1.24
SHANK2-220ENST00000608988 CRCT1Q9UGL9 99 aa7.24□□□□□ -1.25
SHANK2-220ENST00000608988 MT1GP13640 62 aa7.09□□□□□ -1.28
SHANK2-220ENST00000608988 MT1MQ8N339 61 aa7.07□□□□□ -1.28
SHANK2-220ENST00000608988 LOC100996750A0A140TA64 210 aa7.05□□□□□ -1.28
SHANK2-220ENST00000608988 KRTAP19-3Q7Z4W3 81 aa7.04□□□□□ -1.28
SHANK2-220ENST00000608988 KRTAP4-3Q9BYR4 195 aa7.01□□□□□ -1.29
SHANK2-220ENST00000608988 KRTAP9-6A0A140TA67 174 aa6.97□□□□□ -1.29
SHANK2-220ENST00000608988 KRTAP12-4P60329 112 aa6.96□□□□□ -1.29
SHANK2-220ENST00000608988 MACF1Q9UPN3 7388 aaKnown RBP6.86□□□□□ -1.31
SHANK2-220ENST00000608988 LCE5AQ5TCM9 118 aa6.75□□□□□ -1.33
SHANK2-220ENST00000608988 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.73□□□□□ -1.33
SHANK2-220ENST00000608988 MT1AP04731 61 aa6.73□□□□□ -1.33
SHANK2-220ENST00000608988 KRTAP5-9P26371 169 aa6.68□□□□□ -1.34
SHANK2-220ENST00000608988 SYNE2Q8WXH0 6885 aaKnown RBP6.62□□□□□ -1.35
SHANK2-220ENST00000608988 MUC12Q9UKN1 5478 aa6.61□□□□□ -1.35
SHANK2-220ENST00000608988 LCE3BQ5TA77 95 aa6.59□□□□□ -1.35
SHANK2-220ENST00000608988 KRTAP6-3Q3LI67 103 aa6.55□□□□□ -1.36
SHANK2-220ENST00000608988 SPRR2FQ96RM1 72 aa6.55□□□□□ -1.36
SHANK2-220ENST00000608988 LCE3DQ9BYE3 92 aa6.44□□□□□ -1.38
SHANK2-220ENST00000608988 MDN1Q9NU22 5596 aa6.43□□□□□ -1.38
SHANK2-220ENST00000608988 KRTAP6-1Q3LI64 71 aa6.42□□□□□ -1.38
SHANK2-220ENST00000608988 LCE3EQ5T5B0 92 aa6.42□□□□□ -1.38
SHANK2-220ENST00000608988 KRTAP4-9Q9BYQ8 210 aa6.41□□□□□ -1.38
SHANK2-220ENST00000608988 LCE1AQ5T7P2 110 aa6.39□□□□□ -1.39
SHANK2-220ENST00000608988 KRTAP9-7A8MTY7 169 aa6.36□□□□□ -1.39
SHANK2-220ENST00000608988 KRTAP5-5Q701N2 237 aaPredicted RBP6.27□□□□□ -1.41
SHANK2-220ENST00000608988 SPRR2EP22531 72 aa6.23□□□□□ -1.41
SHANK2-220ENST00000608988 SPRR2BP35325 72 aa6.23□□□□□ -1.41
SHANK2-220ENST00000608988 SPRR2AP35326 72 aa6.23□□□□□ -1.41
SHANK2-220ENST00000608988 PRM1P04553 51 aa6.19□□□□□ -1.42
SHANK2-220ENST00000608988 NEBP20929 6669 aa6.1□□□□□ -1.43
SHANK2-220ENST00000608988 SYNE1Q8NF91 8797 aaKnown RBP6.1□□□□□ -1.43
SHANK2-220ENST00000608988 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
SHANK2-220ENST00000608988 DSTQ03001 7570 aaKnown RBP6.03□□□□□ -1.44
SHANK2-220ENST00000608988 SPRR2DP22532 72 aa6□□□□□ -1.45
SHANK2-220ENST00000608988 KRTAP6-2Q3LI66 62 aa5.93□□□□□ -1.46
SHANK2-220ENST00000608988 MT3P25713 68 aa5.81□□□□□ -1.48
SHANK2-220ENST00000608988 KRTAP20-1Q3LI63 56 aa5.6□□□□□ -1.51
SHANK2-220ENST00000608988 KRTAP5-4Q6L8H1 288 aa5.58□□□□□ -1.52
SHANK2-220ENST00000608988 KRTAP2-2Q9BYT5 123 aa5.58□□□□□ -1.52
SHANK2-220ENST00000608988 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
SHANK2-220ENST00000608988 KRTAP4-6Q9BYQ5 205 aa5.26□□□□□ -1.57
SHANK2-220ENST00000608988 LCE1DQ5T752 114 aa5.22□□□□□ -1.57
SHANK2-220ENST00000608988 MT4P47944 62 aa5.2□□□□□ -1.58
SHANK2-220ENST00000608988 HMCN1Q96RW7 5635 aa5.2□□□□□ -1.58
SHANK2-220ENST00000608988 KRTAP20-2Q3LI61 65 aa5.15□□□□□ -1.59
SHANK2-220ENST00000608988 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.59
SHANK2-220ENST00000608988 KRTAP5-2Q701N4 177 aa5.08□□□□□ -1.6
SHANK2-220ENST00000608988 KRTAP5-3Q6L8H2 238 aa5.03□□□□□ -1.6
SHANK2-220ENST00000608988 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
SHANK2-220ENST00000608988 MUC5ACP98088 5654 aa4.7□□□□□ -1.66
SHANK2-220ENST00000608988 KRTAP5-10Q6L8G5 202 aa4.66□□□□□ -1.66
SHANK2-220ENST00000608988 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.67
SHANK2-220ENST00000608988 KRTAP5-1Q6L8H4 278 aa4.62□□□□□ -1.67
SHANK2-220ENST00000608988 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
SHANK2-220ENST00000608988 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
SHANK2-220ENST00000608988 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
SHANK2-220ENST00000608988 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
SHANK2-220ENST00000608988 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
SHANK2-220ENST00000608988 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
SHANK2-220ENST00000608988 KRTAP5-7Q6L8G8 165 aa4.26□□□□□ -1.73
SHANK2-220ENST00000608988 GPR98Q8WXG9 6306 aa4.21□□□□□ -1.73
SHANK2-220ENST00000608988 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
SHANK2-220ENST00000608988 KRTAP9-9Q9BYP9 154 aa4.04□□□□□ -1.76
SHANK2-220ENST00000608988 KRTAP21-1Q3LI58 79 aa4.03□□□□□ -1.77
SHANK2-220ENST00000608988 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.77
SHANK2-220ENST00000608988 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
SHANK2-220ENST00000608988 MUC5BQ9HC84 5762 aaPredicted RBP3.75□□□□□ -1.81
SHANK2-220ENST00000608988 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
SHANK2-220ENST00000608988 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
SHANK2-220ENST00000608988 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
SHANK2-220ENST00000608988 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
SHANK2-220ENST00000608988 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
SHANK2-220ENST00000608988 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 151.6 ms