RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
CTCFL-218ENST00000608440 KRTAP19-7Q3SYF9 63 aa4.03□□□□□ -1.76
CTCFL-218ENST00000608440 MACF1Q9UPN3 7388 aaKnown RBP4.02□□□□□ -1.77
CTCFL-218ENST00000608440 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
CTCFL-218ENST00000608440 MUC12Q9UKN1 5478 aa3.96□□□□□ -1.78
CTCFL-218ENST00000608440 MT1LQ93083 61 aa3.95□□□□□ -1.78
CTCFL-218ENST00000608440 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
CTCFL-218ENST00000608440 MT1EP04732 61 aa3.93□□□□□ -1.78
CTCFL-218ENST00000608440 KRTAP6-3Q3LI67 103 aa3.9□□□□□ -1.78
CTCFL-218ENST00000608440 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
CTCFL-218ENST00000608440 KRTAP9-7A8MTY7 169 aa3.89□□□□□ -1.79
CTCFL-218ENST00000608440 PRM1P04553 51 aa3.89□□□□□ -1.79
CTCFL-218ENST00000608440 MT1GP13640 62 aa3.88□□□□□ -1.79
CTCFL-218ENST00000608440 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
CTCFL-218ENST00000608440 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
CTCFL-218ENST00000608440 SPRR2FQ96RM1 72 aa3.86□□□□□ -1.79
CTCFL-218ENST00000608440 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
CTCFL-218ENST00000608440 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
CTCFL-218ENST00000608440 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.8
CTCFL-218ENST00000608440 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
CTCFL-218ENST00000608440 KRTAP19-4Q3LI73 84 aa3.83□□□□□ -1.8
CTCFL-218ENST00000608440 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
CTCFL-218ENST00000608440 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.76□□□□□ -1.81
CTCFL-218ENST00000608440 MDN1Q9NU22 5596 aa3.76□□□□□ -1.81
CTCFL-218ENST00000608440 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
CTCFL-218ENST00000608440 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
CTCFL-218ENST00000608440 KRTAP5-9P26371 169 aa3.72□□□□□ -1.81
CTCFL-218ENST00000608440 MT1MQ8N339 61 aa3.7□□□□□ -1.82
CTCFL-218ENST00000608440 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
CTCFL-218ENST00000608440 LCE5AQ5TCM9 118 aa3.67□□□□□ -1.82
CTCFL-218ENST00000608440 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
CTCFL-218ENST00000608440 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
CTCFL-218ENST00000608440 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
CTCFL-218ENST00000608440 SPRR2EP22531 72 aa3.64□□□□□ -1.83
CTCFL-218ENST00000608440 SPRR2BP35325 72 aa3.64□□□□□ -1.83
CTCFL-218ENST00000608440 SPRR2AP35326 72 aa3.64□□□□□ -1.83
CTCFL-218ENST00000608440 MT1AP04731 61 aa3.57□□□□□ -1.84
CTCFL-218ENST00000608440 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
CTCFL-218ENST00000608440 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
CTCFL-218ENST00000608440 NEBP20929 6669 aa3.5□□□□□ -1.85
CTCFL-218ENST00000608440 SPRR2DP22532 72 aa3.5□□□□□ -1.85
CTCFL-218ENST00000608440 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
CTCFL-218ENST00000608440 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.89
CTCFL-218ENST00000608440 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
CTCFL-218ENST00000608440 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
CTCFL-218ENST00000608440 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
CTCFL-218ENST00000608440 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
CTCFL-218ENST00000608440 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
CTCFL-218ENST00000608440 MT4P47944 62 aa3.08□□□□□ -1.92
CTCFL-218ENST00000608440 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
CTCFL-218ENST00000608440 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
CTCFL-218ENST00000608440 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
CTCFL-218ENST00000608440 MT3P25713 68 aa2.94□□□□□ -1.94
CTCFL-218ENST00000608440 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
CTCFL-218ENST00000608440 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
CTCFL-218ENST00000608440 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.96
CTCFL-218ENST00000608440 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
CTCFL-218ENST00000608440 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
CTCFL-218ENST00000608440 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
CTCFL-218ENST00000608440 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
CTCFL-218ENST00000608440 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
CTCFL-218ENST00000608440 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
CTCFL-218ENST00000608440 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
CTCFL-218ENST00000608440 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
CTCFL-218ENST00000608440 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
CTCFL-218ENST00000608440 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
CTCFL-218ENST00000608440 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
CTCFL-218ENST00000608440 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
CTCFL-218ENST00000608440 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
CTCFL-218ENST00000608440 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
CTCFL-218ENST00000608440 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
CTCFL-218ENST00000608440 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
CTCFL-218ENST00000608440 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
CTCFL-218ENST00000608440 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
CTCFL-218ENST00000608440 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
CTCFL-218ENST00000608440 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
CTCFL-218ENST00000608440 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms