RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 KRTAP2-4Q9BYR9 128 aa7.86□□□□□ -1.15
NECAB3-221ENST00000607055 KRTAP12-3P60328 96 aa7.85□□□□□ -1.15
NECAB3-221ENST00000607055 PMAIP1Q13794 54 aa7.79□□□□□ -1.16
NECAB3-221ENST00000607055 KRTAP19-3Q7Z4W3 81 aa7.79□□□□□ -1.16
NECAB3-221ENST00000607055 PP632Q6XCG6 107 aa7.77□□□□□ -1.17
NECAB3-221ENST00000607055 SPRR2DP22532 72 aa7.74□□□□□ -1.17
NECAB3-221ENST00000607055 MT1LQ93083 61 aa7.73□□□□□ -1.17
NECAB3-221ENST00000607055 PRO0628Q9UI54 55 aa7.72□□□□□ -1.17
NECAB3-221ENST00000607055 LCE5AQ5TCM9 118 aa7.71□□□□□ -1.18
NECAB3-221ENST00000607055 MT1GP13640 62 aa7.66□□□□□ -1.18
NECAB3-221ENST00000607055 KRTAP2-2Q9BYT5 123 aa7.59□□□□□ -1.19
NECAB3-221ENST00000607055 KRTAP2-1Q9BYU5 128 aa7.59□□□□□ -1.19
NECAB3-221ENST00000607055 MT1MQ8N339 61 aa7.56□□□□□ -1.2
NECAB3-221ENST00000607055 KRTAP15-1Q3LI76 137 aa7.53□□□□□ -1.2
NECAB3-221ENST00000607055 LCE3BQ5TA77 95 aa7.48□□□□□ -1.21
NECAB3-221ENST00000607055 KRTAP4-7Q9BYR0 210 aa7.41□□□□□ -1.22
NECAB3-221ENST00000607055 KRTAP4-3Q9BYR4 195 aa7.4□□□□□ -1.22
NECAB3-221ENST00000607055 PRAC1Q96KF2 57 aa7.39□□□□□ -1.23
NECAB3-221ENST00000607055 KRTAP19-4Q3LI73 84 aa7.37□□□□□ -1.23
NECAB3-221ENST00000607055 LCE3CQ5T5A8 94 aa7.28□□□□□ -1.24
NECAB3-221ENST00000607055 DSTQ03001 7570 aaKnown RBP7.27□□□□□ -1.24
NECAB3-221ENST00000607055 KTN1-AS1Q86SY8 53 aa7.25□□□□□ -1.25
NECAB3-221ENST00000607055 GPR98Q8WXG9 6306 aa7.16□□□□□ -1.26
NECAB3-221ENST00000607055 LOC100996750A0A140TA64 210 aa6.99□□□□□ -1.29
NECAB3-221ENST00000607055 KRTAP4-9Q9BYQ8 210 aa6.94□□□□□ -1.3
NECAB3-221ENST00000607055 SVIPQ8NHG7 77 aa6.92□□□□□ -1.3
NECAB3-221ENST00000607055 KRTAP9-6A8MVA2 160 aa6.86□□□□□ -1.31
NECAB3-221ENST00000607055 LCE4AQ5TA78 99 aa6.86□□□□□ -1.31
NECAB3-221ENST00000607055 KRTAP5-5Q701N2 237 aaPredicted RBP6.85□□□□□ -1.31
NECAB3-221ENST00000607055 KRTAP5-4Q6L8H1 288 aa6.83□□□□□ -1.32
NECAB3-221ENST00000607055 MT4P47944 62 aa6.74□□□□□ -1.33
NECAB3-221ENST00000607055 LCE1DQ5T752 114 aa6.72□□□□□ -1.33
NECAB3-221ENST00000607055 HMCN1Q96RW7 5635 aa6.65□□□□□ -1.34
NECAB3-221ENST00000607055 SPRR5A0A1B0GTR4 108 aa6.61□□□□□ -1.35
NECAB3-221ENST00000607055 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
NECAB3-221ENST00000607055 AHNAK2Q8IVF2 5795 aa6.6□□□□□ -1.35
NECAB3-221ENST00000607055 MT1AP04731 61 aa6.59□□□□□ -1.35
NECAB3-221ENST00000607055 KRTAP12-4P60329 112 aa6.54□□□□□ -1.36
NECAB3-221ENST00000607055 KRTAP6-1Q3LI64 71 aa6.52□□□□□ -1.37
NECAB3-221ENST00000607055 SYNE1Q8NF91 8797 aaKnown RBP6.47□□□□□ -1.37
NECAB3-221ENST00000607055 KRTAP20-2Q3LI61 65 aa6.43□□□□□ -1.38
NECAB3-221ENST00000607055 KRTAP5-10Q6L8G5 202 aa6.38□□□□□ -1.39
NECAB3-221ENST00000607055 KRTAP9-4Q9BYQ2 154 aa6.3□□□□□ -1.4
NECAB3-221ENST00000607055 KRTAP5-3Q6L8H2 238 aa6.2□□□□□ -1.42
NECAB3-221ENST00000607055 KRTAP5-7Q6L8G8 165 aa6.18□□□□□ -1.42
NECAB3-221ENST00000607055 KRTAP6-2Q3LI66 62 aa6.12□□□□□ -1.43
NECAB3-221ENST00000607055 LUZP6Q538Z0 58 aa6.11□□□□□ -1.43
NECAB3-221ENST00000607055 KRTAP5-2Q701N4 177 aa6.09□□□□□ -1.43
NECAB3-221ENST00000607055 MT3P25713 68 aa6□□□□□ -1.45
NECAB3-221ENST00000607055 KRTAP4-11Q9BYQ6 195 aa5.72□□□□□ -1.49
NECAB3-221ENST00000607055 OBSCNQ5VST9 7968 aa5.53□□□□□ -1.52
NECAB3-221ENST00000607055 NDUFAF8A1L188 74 aa5.53□□□□□ -1.52
NECAB3-221ENST00000607055 AHNAKQ09666 5890 aaKnown RBP5.52□□□□□ -1.53
NECAB3-221ENST00000607055 KRTAP5-8O75690 187 aa5.51□□□□□ -1.53
NECAB3-221ENST00000607055 MUC5BQ9HC84 5762 aaPredicted RBP5.46□□□□□ -1.54
NECAB3-221ENST00000607055 MUC5ACP98088 5654 aa5.43□□□□□ -1.54
NECAB3-221ENST00000607055 LCE3DQ9BYE3 92 aa5.37□□□□□ -1.55
NECAB3-221ENST00000607055 KRTAP5-1Q6L8H4 278 aa5.35□□□□□ -1.55
NECAB3-221ENST00000607055 LCE1EQ5T753 118 aa5.33□□□□□ -1.56
NECAB3-221ENST00000607055 KRTAP9-9Q9BYP9 154 aa5.28□□□□□ -1.56
NECAB3-221ENST00000607055 LCE3EQ5T5B0 92 aa5.15□□□□□ -1.59
NECAB3-221ENST00000607055 LCE1BQ5T7P3 118 aa5.04□□□□□ -1.6
NECAB3-221ENST00000607055 KRTAP4-2Q9BYR5 136 aa5□□□□□ -1.61
NECAB3-221ENST00000607055 LCE1CQ5T751 118 aa4.95□□□□□ -1.62
NECAB3-221ENST00000607055 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
NECAB3-221ENST00000607055 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.56□□□□□ -1.68
NECAB3-221ENST00000607055 INE1O15225 51 aa4.51□□□□□ -1.69
NECAB3-221ENST00000607055 KRTAP5-11Q6L8G4 156 aa4.43□□□□□ -1.7
NECAB3-221ENST00000607055 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
NECAB3-221ENST00000607055 KRTAP21-2Q3LI59 83 aa4.27□□□□□ -1.73
NECAB3-221ENST00000607055 PRM1P04553 51 aa4.22□□□□□ -1.73
NECAB3-221ENST00000607055 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
NECAB3-221ENST00000607055 H3BS24 57 aa3.92□□□□□ -1.78
NECAB3-221ENST00000607055 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
NECAB3-221ENST00000607055 PHGR1C9JFL3 82 aa3.81□□□□□ -1.8
NECAB3-221ENST00000607055 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
NECAB3-221ENST00000607055 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
NECAB3-221ENST00000607055 MUC16Q8WXI7 14507 aa2.46□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 35.8 ms