RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 CEP350Q5VT06 3117 aa-3.71□□□□□ -3
RNU6-88P-201ENST00000606801 SPEGQ15772 3267 aa-3.72□□□□□ -3
RNU6-88P-201ENST00000606801 DMDP11532 3685 aa-3.73□□□□□ -3.01
RNU6-88P-201ENST00000606801 CLTCL1P53675 1640 aa-3.74□□□□□ -3.01
RNU6-88P-201ENST00000606801 SMIM2Q9BVW6 85 aa-3.77□□□□□ -3.01
RNU6-88P-201ENST00000606801 NFAT5O94916 1531 aa-3.78□□□□□ -3.01
RNU6-88P-201ENST00000606801 SZT2Q5T011 3432 aa-3.79□□□□□ -3.02
RNU6-88P-201ENST00000606801 MT1FP04733 61 aa-3.79□□□□□ -3.02
RNU6-88P-201ENST00000606801 SMIM5Q71RC9 77 aa-3.81□□□□□ -3.02
RNU6-88P-201ENST00000606801 ADCY10Q96PN6 1610 aa-3.84□□□□□ -3.02
RNU6-88P-201ENST00000606801 TRPM2O94759 1503 aa-3.84□□□□□ -3.02
RNU6-88P-201ENST00000606801 ABCC8Q09428 1581 aa-3.88□□□□□ -3.03
RNU6-88P-201ENST00000606801 WDFY4Q6ZS81 3184 aa-3.88□□□□□ -3.03
RNU6-88P-201ENST00000606801 FANCD2Q9BXW9 1451 aa-3.94□□□□□ -3.04
RNU6-88P-201ENST00000606801 CMC2Q9NRP2 79 aa-4.03□□□□□ -3.05
RNU6-88P-201ENST00000606801 CENPEQ02224 2701 aa-4.06□□□□□ -3.06
RNU6-88P-201ENST00000606801 NDUFA1O15239 70 aa-4.07□□□□□ -3.06
RNU6-88P-201ENST00000606801 MUC3AQ02505 3323 aa-4.09□□□□□ -3.06
RNU6-88P-201ENST00000606801 EP400Q96L91 3159 aa-4.14□□□□□ -3.07
RNU6-88P-201ENST00000606801 DCHS1Q96JQ0 3298 aa-4.18□□□□□ -3.08
RNU6-88P-201ENST00000606801 SMIM31A0A1B0GVY4 71 aa-4.21□□□□□ -3.08
RNU6-88P-201ENST00000606801 DNAH12Q6ZR08 3092 aa-4.21□□□□□ -3.08
RNU6-88P-201ENST00000606801 XIRP2A4UGR9 3374 aa-4.25□□□□□ -3.09
RNU6-88P-201ENST00000606801 MKI67P46013 3256 aaKnown RBP-4.25□□□□□ -3.09
RNU6-88P-201ENST00000606801 USP34Q70CQ2 3546 aa-4.28□□□□□ -3.09
RNU6-88P-201ENST00000606801 TOMM7Q9P0U1 55 aa-4.3□□□□□ -3.1
RNU6-88P-201ENST00000606801 DNAH14Q0VDD8 3507 aa-4.38□□□□□ -3.11
RNU6-88P-201ENST00000606801 LINC01590Q5TEZ4 76 aa-4.39□□□□□ -3.11
RNU6-88P-201ENST00000606801 RHPN1-AS1Q9BWJ2 59 aa-4.42□□□□□ -3.12
RNU6-88P-201ENST00000606801 ERICH3Q5RHP9 1530 aa-4.45□□□□□ -3.12
RNU6-88P-201ENST00000606801 TTTY10Q9BZA0 68 aa-4.46□□□□□ -3.12
RNU6-88P-201ENST00000606801 UNC80Q8N2C7 3258 aa-4.46□□□□□ -3.12
RNU6-88P-201ENST00000606801 DUOX1Q9NRD9 1551 aa-4.47□□□□□ -3.12
RNU6-88P-201ENST00000606801 DEFB133Q30KQ1 61 aa-4.49□□□□□ -3.13
RNU6-88P-201ENST00000606801 CFAP47Q6ZTR5 3102 aa-4.5□□□□□ -3.13
RNU6-88P-201ENST00000606801 LOC400499M0QZD8 3231 aa-4.51□□□□□ -3.13
RNU6-88P-201ENST00000606801 SAMD9LQ8IVG5 1584 aa-4.56□□□□□ -3.14
RNU6-88P-201ENST00000606801 A0A096LNI7 61 aa-4.6□□□□□ -3.15
RNU6-88P-201ENST00000606801 RPL39P62891 51 aaKnown RBP-4.63□□□□□ -3.15
RNU6-88P-201ENST00000606801 SNRPGP15A8MWD9 76 aa-4.65□□□□□ -3.15
RNU6-88P-201ENST00000606801 HTN1P15515 57 aa-4.66□□□□□ -3.16
RNU6-88P-201ENST00000606801 ASPMQ8IZT6 3477 aa-4.68□□□□□ -3.16
RNU6-88P-201ENST00000606801 IQGAP2Q13576 1575 aa-4.74□□□□□ -3.17
RNU6-88P-201ENST00000606801 TOP2AP11388 1531 aaKnown RBP-4.76□□□□□ -3.17
RNU6-88P-201ENST00000606801 KRTAP19-2Q3LHN2 52 aa-4.8□□□□□ -3.18
RNU6-88P-201ENST00000606801 CD52P31358 61 aa-4.82□□□□□ -3.18
RNU6-88P-201ENST00000606801 DEFB124Q8NES8 71 aa-4.82□□□□□ -3.18
RNU6-88P-201ENST00000606801 RPL39LQ96EH5 51 aaKnown RBP-4.83□□□□□ -3.18
RNU6-88P-201ENST00000606801 ATP7AQ04656 1500 aa-4.83□□□□□ -3.18
RNU6-88P-201ENST00000606801 MROH2BQ7Z745 1585 aa-4.85□□□□□ -3.19
RNU6-88P-201ENST00000606801 BRCA2P51587 3418 aa-4.87□□□□□ -3.19
RNU6-88P-201ENST00000606801 VCANP13611 3396 aa-4.92□□□□□ -3.2
RNU6-88P-201ENST00000606801 TOMM5Q8N4H5 51 aa-5.04□□□□□ -3.22
RNU6-88P-201ENST00000606801 CENPFP49454 3210 aa-5.05□□□□□ -3.22
RNU6-88P-201ENST00000606801 DEFB104AQ8WTQ1 72 aa-5.05□□□□□ -3.22
RNU6-88P-201ENST00000606801 CDH23Q9H251 3354 aa-5.15□□□□□ -3.23
RNU6-88P-201ENST00000606801 VPS13AQ96RL7 3174 aa-5.31□□□□□ -3.26
RNU6-88P-201ENST00000606801 H3BUX3 64 aa-5.34□□□□□ -3.26
RNU6-88P-201ENST00000606801 LINC01556Q5JQF7 62 aa-5.36□□□□□ -3.27
RNU6-88P-201ENST00000606801 K7EIM0 57 aa-5.57□□□□□ -3.3
RNU6-88P-201ENST00000606801 GCC2Q8IWJ2 1684 aa-5.73□□□□□ -3.33
RNU6-88P-201ENST00000606801 ARHGAP5-AS1Q96IT6 56 aa-5.78□□□□□ -3.33
RNU6-88P-201ENST00000606801 UTRNP46939 3433 aa-5.78□□□□□ -3.34
RNU6-88P-201ENST00000606801 APELAP0DMC3 54 aa-5.9□□□□□ -3.35
RNU6-88P-201ENST00000606801 PRCDQ00LT1 54 aa-5.9□□□□□ -3.35
RNU6-88P-201ENST00000606801 A0A096LPF7 62 aa-5.92□□□□□ -3.36
RNU6-88P-201ENST00000606801 SNRPGP62308 76 aaKnown RBP-6.01□□□□□ -3.37
RNU6-88P-201ENST00000606801 TMEM167AQ8TBQ9 72 aa-6.09□□□□□ -3.38
RNU6-88P-201ENST00000606801 HTN3P15516 51 aa-6.37□□□□□ -3.43
RNU6-88P-201ENST00000606801 RPL39P5Q59GN2 51 aa-6.4□□□□□ -3.43
RNU6-88P-201ENST00000606801 H3BSH0 61 aa-6.5□□□□□ -3.45
RNU6-88P-201ENST00000606801 GOLGB1Q14789 3259 aaKnown RBP-6.51□□□□□ -3.45
RNU6-88P-201ENST00000606801 DEFB108AA8MXU0 73 aa-6.56□□□□□ -3.46
RNU6-88P-201ENST00000606801 Q9Y3F1 56 aa-6.68□□□□□ -3.48
RNU6-88P-201ENST00000606801 COX14Q96I36 57 aa-7.18□□□□□ -3.56
RNU6-88P-201ENST00000606801 DEFB108BQ8NET1 73 aa-7.31□□□□□ -3.58
RNU6-88P-201ENST00000606801 STATHP02808 62 aa-8.24□□□□□ -3.73
Retrieved 77 of 20,778 RNA–protein pairs in 59.4 ms