RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 DSTQ03001 7570 aaKnown RBP4.99□□□□□ -1.61
CTSA-213ENST00000606782 MT1EP04732 61 aa4.98□□□□□ -1.61
CTSA-213ENST00000606782 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
CTSA-213ENST00000606782 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
CTSA-213ENST00000606782 ROMO1P60602 79 aa4.89□□□□□ -1.63
CTSA-213ENST00000606782 BRK1Q8WUW1 75 aa4.89□□□□□ -1.63
CTSA-213ENST00000606782 PRO0628Q9UI54 55 aa4.89□□□□□ -1.63
CTSA-213ENST00000606782 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
CTSA-213ENST00000606782 MT1GP13640 62 aa4.85□□□□□ -1.63
CTSA-213ENST00000606782 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
CTSA-213ENST00000606782 GPR98Q8WXG9 6306 aa4.82□□□□□ -1.64
CTSA-213ENST00000606782 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
CTSA-213ENST00000606782 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
CTSA-213ENST00000606782 PP632Q6XCG6 107 aa4.78□□□□□ -1.64
CTSA-213ENST00000606782 MT1MQ8N339 61 aa4.74□□□□□ -1.65
CTSA-213ENST00000606782 MT1LQ93083 61 aa4.74□□□□□ -1.65
CTSA-213ENST00000606782 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
CTSA-213ENST00000606782 LCE1DQ5T752 114 aa4.71□□□□□ -1.66
CTSA-213ENST00000606782 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
CTSA-213ENST00000606782 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
CTSA-213ENST00000606782 KRTAP12-3P60328 96 aa4.7□□□□□ -1.66
CTSA-213ENST00000606782 PMAIP1Q13794 54 aa4.65□□□□□ -1.67
CTSA-213ENST00000606782 KRTAP5-4Q6L8H1 288 aa4.63□□□□□ -1.67
CTSA-213ENST00000606782 HMCN1Q96RW7 5635 aa4.62□□□□□ -1.67
CTSA-213ENST00000606782 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
CTSA-213ENST00000606782 MT4P47944 62 aa4.6□□□□□ -1.67
CTSA-213ENST00000606782 KRTAP15-1Q3LI76 137 aa4.53□□□□□ -1.68
CTSA-213ENST00000606782 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
CTSA-213ENST00000606782 AHNAK2Q8IVF2 5795 aa4.5□□□□□ -1.69
CTSA-213ENST00000606782 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
CTSA-213ENST00000606782 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
CTSA-213ENST00000606782 KRTAP5-10Q6L8G5 202 aa4.46□□□□□ -1.7
CTSA-213ENST00000606782 H3BS24 57 aa4.4□□□□□ -1.71
CTSA-213ENST00000606782 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
CTSA-213ENST00000606782 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
CTSA-213ENST00000606782 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
CTSA-213ENST00000606782 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.71
CTSA-213ENST00000606782 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
CTSA-213ENST00000606782 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
CTSA-213ENST00000606782 KRTAP5-7Q6L8G8 165 aa4.31□□□□□ -1.72
CTSA-213ENST00000606782 SYNE1Q8NF91 8797 aaKnown RBP4.28□□□□□ -1.72
CTSA-213ENST00000606782 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
CTSA-213ENST00000606782 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
CTSA-213ENST00000606782 MT1AP04731 61 aa4.04□□□□□ -1.76
CTSA-213ENST00000606782 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
CTSA-213ENST00000606782 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
CTSA-213ENST00000606782 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
CTSA-213ENST00000606782 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
CTSA-213ENST00000606782 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
CTSA-213ENST00000606782 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
CTSA-213ENST00000606782 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
CTSA-213ENST00000606782 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
CTSA-213ENST00000606782 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
CTSA-213ENST00000606782 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
CTSA-213ENST00000606782 MUC5ACP98088 5654 aa3.75□□□□□ -1.81
CTSA-213ENST00000606782 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
CTSA-213ENST00000606782 MT3P25713 68 aa3.7□□□□□ -1.82
CTSA-213ENST00000606782 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
CTSA-213ENST00000606782 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
CTSA-213ENST00000606782 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
CTSA-213ENST00000606782 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
CTSA-213ENST00000606782 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
CTSA-213ENST00000606782 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
CTSA-213ENST00000606782 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
CTSA-213ENST00000606782 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
CTSA-213ENST00000606782 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
CTSA-213ENST00000606782 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
CTSA-213ENST00000606782 INE1O15225 51 aa3.03□□□□□ -1.92
CTSA-213ENST00000606782 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
CTSA-213ENST00000606782 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
CTSA-213ENST00000606782 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
CTSA-213ENST00000606782 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
CTSA-213ENST00000606782 PHGR1C9JFL3 82 aa2.56□□□□□ -2
CTSA-213ENST00000606782 PRM1P04553 51 aa2.51□□□□□ -2.01
CTSA-213ENST00000606782 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
CTSA-213ENST00000606782 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
CTSA-213ENST00000606782 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
CTSA-213ENST00000606782 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 97.7 ms