RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 MT1FP04733 61 aa4.4□□□□□ -1.71
CSNK1A1-209ENST00000606299 KRTAP12-1P59990 96 aa4.39□□□□□ -1.71
CSNK1A1-209ENST00000606299 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
CSNK1A1-209ENST00000606299 KTN1-AS1Q86SY8 53 aa4.28□□□□□ -1.72
CSNK1A1-209ENST00000606299 ROMO1P60602 79 aa4.25□□□□□ -1.73
CSNK1A1-209ENST00000606299 CAMK2N1Q7Z7J9 78 aa4.25□□□□□ -1.73
CSNK1A1-209ENST00000606299 PLAC4Q8WY50 150 aa4.24□□□□□ -1.73
CSNK1A1-209ENST00000606299 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.74
CSNK1A1-209ENST00000606299 MT1BP07438 61 aa4.16□□□□□ -1.74
CSNK1A1-209ENST00000606299 C10orf95Q9H7T3 257 aa4.16□□□□□ -1.74
CSNK1A1-209ENST00000606299 KRTAP5-5Q701N2 237 aaPredicted RBP4.14□□□□□ -1.75
CSNK1A1-209ENST00000606299 KRTAP25-1Q3LHN0 102 aa4.07□□□□□ -1.76
CSNK1A1-209ENST00000606299 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
CSNK1A1-209ENST00000606299 MT1XP80297 61 aa4.04□□□□□ -1.76
CSNK1A1-209ENST00000606299 TNP1P09430 55 aa4.03□□□□□ -1.76
CSNK1A1-209ENST00000606299 PRO2289Q9P1D8 64 aa4□□□□□ -1.77
CSNK1A1-209ENST00000606299 LCE1CQ5T751 118 aa3.93□□□□□ -1.78
CSNK1A1-209ENST00000606299 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
CSNK1A1-209ENST00000606299 USH2AO75445 5202 aa3.91□□□□□ -1.78
CSNK1A1-209ENST00000606299 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
CSNK1A1-209ENST00000606299 KRTAP19-6Q3LI70 58 aa3.86□□□□□ -1.79
CSNK1A1-209ENST00000606299 SSPOA2VEC9 5147 aa3.84□□□□□ -1.79
CSNK1A1-209ENST00000606299 KRTAP8-1Q8IUC2 63 aa3.73□□□□□ -1.81
CSNK1A1-209ENST00000606299 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
CSNK1A1-209ENST00000606299 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
CSNK1A1-209ENST00000606299 FSIP2Q5CZC0 6907 aa3.68□□□□□ -1.82
CSNK1A1-209ENST00000606299 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
CSNK1A1-209ENST00000606299 CRCT1Q9UGL9 99 aa3.67□□□□□ -1.82
CSNK1A1-209ENST00000606299 KMT2DO14686 5537 aa3.62□□□□□ -1.83
CSNK1A1-209ENST00000606299 FCGBPQ9Y6R7 5405 aaPredicted RBP3.62□□□□□ -1.83
CSNK1A1-209ENST00000606299 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
CSNK1A1-209ENST00000606299 MT1EP04732 61 aa3.53□□□□□ -1.84
CSNK1A1-209ENST00000606299 SPRR2FQ96RM1 72 aa3.48□□□□□ -1.85
CSNK1A1-209ENST00000606299 MT1LQ93083 61 aa3.47□□□□□ -1.85
CSNK1A1-209ENST00000606299 SPRR5A0A1B0GTR4 108 aa3.45□□□□□ -1.86
CSNK1A1-209ENST00000606299 MACF1Q9UPN3 7388 aaKnown RBP3.41□□□□□ -1.86
CSNK1A1-209ENST00000606299 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
CSNK1A1-209ENST00000606299 KRTAP19-3Q7Z4W3 81 aa3.39□□□□□ -1.87
CSNK1A1-209ENST00000606299 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
CSNK1A1-209ENST00000606299 MT1GP13640 62 aa3.34□□□□□ -1.87
CSNK1A1-209ENST00000606299 MT1MQ8N339 61 aa3.34□□□□□ -1.87
CSNK1A1-209ENST00000606299 MUC12Q9UKN1 5478 aa3.32□□□□□ -1.88
CSNK1A1-209ENST00000606299 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
CSNK1A1-209ENST00000606299 SPRR2EP22531 72 aa3.3□□□□□ -1.88
CSNK1A1-209ENST00000606299 SPRR2BP35325 72 aa3.3□□□□□ -1.88
CSNK1A1-209ENST00000606299 SPRR2AP35326 72 aa3.3□□□□□ -1.88
CSNK1A1-209ENST00000606299 SYNE2Q8WXH0 6885 aaKnown RBP3.29□□□□□ -1.88
CSNK1A1-209ENST00000606299 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
CSNK1A1-209ENST00000606299 SPRR2DP22532 72 aa3.18□□□□□ -1.9
CSNK1A1-209ENST00000606299 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
CSNK1A1-209ENST00000606299 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
CSNK1A1-209ENST00000606299 NEBP20929 6669 aa3.02□□□□□ -1.93
CSNK1A1-209ENST00000606299 KRTAP2-3P0C7H8 128 aa2.99□□□□□ -1.93
CSNK1A1-209ENST00000606299 KRTAP2-4Q9BYR9 128 aa2.99□□□□□ -1.93
CSNK1A1-209ENST00000606299 KRTAP2-1Q9BYU5 128 aa2.99□□□□□ -1.93
CSNK1A1-209ENST00000606299 DSTQ03001 7570 aaKnown RBP2.98□□□□□ -1.93
CSNK1A1-209ENST00000606299 MT1AP04731 61 aa2.95□□□□□ -1.94
CSNK1A1-209ENST00000606299 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
CSNK1A1-209ENST00000606299 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
CSNK1A1-209ENST00000606299 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
CSNK1A1-209ENST00000606299 KRTAP12-4P60329 112 aa2.78□□□□□ -1.96
CSNK1A1-209ENST00000606299 MT4P47944 62 aa2.77□□□□□ -1.97
CSNK1A1-209ENST00000606299 INE1O15225 51 aa2.74□□□□□ -1.97
CSNK1A1-209ENST00000606299 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
CSNK1A1-209ENST00000606299 SYNE1Q8NF91 8797 aaKnown RBP2.7□□□□□ -1.98
CSNK1A1-209ENST00000606299 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
CSNK1A1-209ENST00000606299 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
CSNK1A1-209ENST00000606299 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
CSNK1A1-209ENST00000606299 PRM1P04553 51 aa2.25□□□□□ -2.05
CSNK1A1-209ENST00000606299 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
CSNK1A1-209ENST00000606299 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
CSNK1A1-209ENST00000606299 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
CSNK1A1-209ENST00000606299 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
CSNK1A1-209ENST00000606299 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
CSNK1A1-209ENST00000606299 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
CSNK1A1-209ENST00000606299 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
CSNK1A1-209ENST00000606299 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms