RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 A0A0D9SG42 100 aa4.84□□□□□ -1.63
CTSA-210ENST00000606000 A6NED7 52 aa4.84□□□□□ -1.63
CTSA-210ENST00000606000 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.63
CTSA-210ENST00000606000 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.63
CTSA-210ENST00000606000 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
CTSA-210ENST00000606000 SPRR2DP22532 72 aa4.78□□□□□ -1.64
CTSA-210ENST00000606000 CAMK2N1Q7Z7J9 78 aa4.77□□□□□ -1.65
CTSA-210ENST00000606000 KTN1-AS1Q86SY8 53 aa4.75□□□□□ -1.65
CTSA-210ENST00000606000 SPINT4Q6UDR6 99 aa4.72□□□□□ -1.65
CTSA-210ENST00000606000 UQCR11O14957 56 aa4.7□□□□□ -1.66
CTSA-210ENST00000606000 KRTAP12-1P59990 96 aa4.69□□□□□ -1.66
CTSA-210ENST00000606000 KRTAP15-1Q3LI76 137 aa4.69□□□□□ -1.66
CTSA-210ENST00000606000 KRTAP2-2Q9BYT5 123 aa4.69□□□□□ -1.66
CTSA-210ENST00000606000 KRTAP2-1Q9BYU5 128 aa4.69□□□□□ -1.66
CTSA-210ENST00000606000 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
CTSA-210ENST00000606000 MIR22HGQ0VDD5 57 aa4.67□□□□□ -1.66
CTSA-210ENST00000606000 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
CTSA-210ENST00000606000 MT1EP04732 61 aa4.59□□□□□ -1.67
CTSA-210ENST00000606000 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
CTSA-210ENST00000606000 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
CTSA-210ENST00000606000 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
CTSA-210ENST00000606000 K7ERS5 55 aa4.46□□□□□ -1.7
CTSA-210ENST00000606000 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
CTSA-210ENST00000606000 LCE3AQ5TA76 89 aa4.43□□□□□ -1.7
CTSA-210ENST00000606000 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.7
CTSA-210ENST00000606000 MT1GP13640 62 aa4.39□□□□□ -1.71
CTSA-210ENST00000606000 TNP1P09430 55 aa4.38□□□□□ -1.71
CTSA-210ENST00000606000 MT1LQ93083 61 aa4.38□□□□□ -1.71
CTSA-210ENST00000606000 MT1MQ8N339 61 aa4.37□□□□□ -1.71
CTSA-210ENST00000606000 PP632Q6XCG6 107 aa4.34□□□□□ -1.71
CTSA-210ENST00000606000 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
CTSA-210ENST00000606000 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
CTSA-210ENST00000606000 ROMO1P60602 79 aa4.29□□□□□ -1.72
CTSA-210ENST00000606000 KRTAP12-3P60328 96 aa4.22□□□□□ -1.73
CTSA-210ENST00000606000 MT4P47944 62 aa4.2□□□□□ -1.74
CTSA-210ENST00000606000 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
CTSA-210ENST00000606000 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
CTSA-210ENST00000606000 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.75
CTSA-210ENST00000606000 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
CTSA-210ENST00000606000 AHNAK2Q8IVF2 5795 aa3.95□□□□□ -1.78
CTSA-210ENST00000606000 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
CTSA-210ENST00000606000 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
CTSA-210ENST00000606000 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
CTSA-210ENST00000606000 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
CTSA-210ENST00000606000 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
CTSA-210ENST00000606000 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
CTSA-210ENST00000606000 KRTAP12-4P60329 112 aa3.84□□□□□ -1.79
CTSA-210ENST00000606000 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
CTSA-210ENST00000606000 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
CTSA-210ENST00000606000 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
CTSA-210ENST00000606000 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
CTSA-210ENST00000606000 MT1AP04731 61 aa3.72□□□□□ -1.81
CTSA-210ENST00000606000 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
CTSA-210ENST00000606000 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
CTSA-210ENST00000606000 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
CTSA-210ENST00000606000 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
CTSA-210ENST00000606000 MT3P25713 68 aa3.55□□□□□ -1.84
CTSA-210ENST00000606000 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
CTSA-210ENST00000606000 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
CTSA-210ENST00000606000 A0A0A0MQY5 61 aa3.38□□□□□ -1.87
CTSA-210ENST00000606000 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
CTSA-210ENST00000606000 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
CTSA-210ENST00000606000 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
CTSA-210ENST00000606000 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
CTSA-210ENST00000606000 MUC5BQ9HC84 5762 aaPredicted RBP3.2□□□□□ -1.9
CTSA-210ENST00000606000 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
CTSA-210ENST00000606000 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
CTSA-210ENST00000606000 INE1O15225 51 aa3.13□□□□□ -1.91
CTSA-210ENST00000606000 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
CTSA-210ENST00000606000 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
CTSA-210ENST00000606000 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
CTSA-210ENST00000606000 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
CTSA-210ENST00000606000 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
CTSA-210ENST00000606000 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
CTSA-210ENST00000606000 PRM1P04553 51 aa2.25□□□□□ -2.05
CTSA-210ENST00000606000 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
CTSA-210ENST00000606000 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
CTSA-210ENST00000606000 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 83 ms