RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
SH3D19-211ENST00000604030 PKHD1P08F94 4074 aa6.13□□□□□ -1.43
SH3D19-211ENST00000604030 TNXBP22105 4242 aa6.12□□□□□ -1.43
SH3D19-211ENST00000604030 HYDINQ4G0P3 5121 aa6.12□□□□□ -1.43
SH3D19-211ENST00000604030 EPPK1P58107 5090 aaKnown RBP6.09□□□□□ -1.43
SH3D19-211ENST00000604030 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.43
SH3D19-211ENST00000604030 LPAP08519 4548 aa6.08□□□□□ -1.44
SH3D19-211ENST00000604030 ABCA13Q86UQ4 5058 aa6□□□□□ -1.45
SH3D19-211ENST00000604030 LCE2AQ5TA79 106 aaPredicted RBP5.99□□□□□ -1.45
SH3D19-211ENST00000604030 MT4P47944 62 aa5.98□□□□□ -1.45
SH3D19-211ENST00000604030 SYNE1Q8NF91 8797 aaKnown RBP5.94□□□□□ -1.46
SH3D19-211ENST00000604030 LCE1BQ5T7P3 118 aa5.92□□□□□ -1.46
SH3D19-211ENST00000604030 LCE1DQ5T752 114 aa5.92□□□□□ -1.46
SH3D19-211ENST00000604030 LCE1AQ5T7P2 110 aa5.85□□□□□ -1.47
SH3D19-211ENST00000604030 RNF213Q63HN8 5207 aa5.81□□□□□ -1.48
SH3D19-211ENST00000604030 KRTAP9-2Q9BYQ4 174 aa5.81□□□□□ -1.48
SH3D19-211ENST00000604030 KRTAP4-9Q9BYQ8 210 aa5.76□□□□□ -1.49
SH3D19-211ENST00000604030 HMCN2Q8NDA2 5059 aa5.74□□□□□ -1.49
SH3D19-211ENST00000604030 KRTAP9-6A8MVA2 160 aa5.72□□□□□ -1.49
SH3D19-211ENST00000604030 FAT4Q6V0I7 4981 aa5.7□□□□□ -1.5
SH3D19-211ENST00000604030 KRTAP9-4Q9BYQ2 154 aa5.67□□□□□ -1.5
SH3D19-211ENST00000604030 KRTAP6-1Q3LI64 71 aa5.65□□□□□ -1.5
SH3D19-211ENST00000604030 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.51
SH3D19-211ENST00000604030 KRTAP6-2Q3LI66 62 aa5.63□□□□□ -1.51
SH3D19-211ENST00000604030 UBR4Q5T4S7 5183 aa5.61□□□□□ -1.51
SH3D19-211ENST00000604030 KRTAP6-3Q3LI67 103 aa5.53□□□□□ -1.52
SH3D19-211ENST00000604030 LCE4AQ5TA78 99 aa5.51□□□□□ -1.53
SH3D19-211ENST00000604030 KRTAP9-6A0A140TA67 174 aa5.44□□□□□ -1.54
SH3D19-211ENST00000604030 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
SH3D19-211ENST00000604030 KRTAP20-1Q3LI63 56 aa5.39□□□□□ -1.55
SH3D19-211ENST00000604030 KRTAP9-7A8MTY7 169 aa5.31□□□□□ -1.56
SH3D19-211ENST00000604030 MUC2Q02817 5179 aa5.3□□□□□ -1.56
SH3D19-211ENST00000604030 FSIP2Q5CZC0 6907 aa5.2□□□□□ -1.58
SH3D19-211ENST00000604030 KRTAP2-2Q9BYT5 123 aa5.19□□□□□ -1.58
SH3D19-211ENST00000604030 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.09□□□□□ -1.59
SH3D19-211ENST00000604030 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
SH3D19-211ENST00000604030 LCE1CQ5T751 118 aa4.97□□□□□ -1.61
SH3D19-211ENST00000604030 LCE1EQ5T753 118 aa4.97□□□□□ -1.61
SH3D19-211ENST00000604030 LCE1FQ5T754 118 aa4.97□□□□□ -1.61
SH3D19-211ENST00000604030 USH2AO75445 5202 aa4.84□□□□□ -1.63
SH3D19-211ENST00000604030 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
SH3D19-211ENST00000604030 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.65
SH3D19-211ENST00000604030 KRTAP9-9Q9BYP9 154 aa4.64□□□□□ -1.67
SH3D19-211ENST00000604030 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
SH3D19-211ENST00000604030 KRTAP20-2Q3LI61 65 aa4.53□□□□□ -1.68
SH3D19-211ENST00000604030 DSTQ03001 7570 aaKnown RBP4.49□□□□□ -1.69
SH3D19-211ENST00000604030 KMT2DO14686 5537 aa4.43□□□□□ -1.7
SH3D19-211ENST00000604030 KRTAP4-6Q9BYQ5 205 aa4.41□□□□□ -1.7
SH3D19-211ENST00000604030 SSPOA2VEC9 5147 aa4.4□□□□□ -1.7
SH3D19-211ENST00000604030 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
SH3D19-211ENST00000604030 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
SH3D19-211ENST00000604030 NEBP20929 6669 aa4.33□□□□□ -1.72
SH3D19-211ENST00000604030 MUC19Q7Z5P9 8384 aa4.31□□□□□ -1.72
SH3D19-211ENST00000604030 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
SH3D19-211ENST00000604030 MACF1Q9UPN3 7388 aaKnown RBP4.17□□□□□ -1.74
SH3D19-211ENST00000604030 MDN1Q9NU22 5596 aa4.11□□□□□ -1.75
SH3D19-211ENST00000604030 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
SH3D19-211ENST00000604030 KRTAP4-12Q9BQ66 201 aa3.87□□□□□ -1.79
SH3D19-211ENST00000604030 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
SH3D19-211ENST00000604030 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.79
SH3D19-211ENST00000604030 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
SH3D19-211ENST00000604030 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
SH3D19-211ENST00000604030 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
SH3D19-211ENST00000604030 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.87
SH3D19-211ENST00000604030 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
SH3D19-211ENST00000604030 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.87
SH3D19-211ENST00000604030 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
SH3D19-211ENST00000604030 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
SH3D19-211ENST00000604030 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
SH3D19-211ENST00000604030 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
SH3D19-211ENST00000604030 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
SH3D19-211ENST00000604030 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
SH3D19-211ENST00000604030 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
SH3D19-211ENST00000604030 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
SH3D19-211ENST00000604030 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
SH3D19-211ENST00000604030 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
SH3D19-211ENST00000604030 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms