RNA–Protein interactions for RNA: ENST00000600625.5

GTPBP3-222, Transcript of GTP binding protein 3, mitochondrial, human

TSL 1 (best) BASIC

Gene GTPBP3, Length 2,493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-222	ENST00000600625	KRTAP4-3	Q9BYR4	195 aa		6.1	□□□□□ -1.43
GTPBP3-222	ENST00000600625	CRCT1	Q9UGL9	99 aa		6	□□□□□ -1.45
GTPBP3-222	ENST00000600625	KRTAP9-2	Q9BYQ4	174 aa		5.91	□□□□□ -1.46
GTPBP3-222	ENST00000600625	MT1M	Q8N339	61 aa		5.88	□□□□□ -1.47
GTPBP3-222	ENST00000600625	LCE2D	Q5TA82	110 aa	Predicted RBP	5.88	□□□□□ -1.47
GTPBP3-222	ENST00000600625	KRTAP4-9	Q9BYQ8	210 aa		5.83	□□□□□ -1.48
GTPBP3-222	ENST00000600625	LCE3B	Q5TA77	95 aa		5.83	□□□□□ -1.48
GTPBP3-222	ENST00000600625	FSIP2	Q5CZC0	6907 aa		5.83	□□□□□ -1.48
GTPBP3-222	ENST00000600625	SSPO	A2VEC9	5147 aa		5.8	□□□□□ -1.48
GTPBP3-222	ENST00000600625	KRTAP19-3	Q7Z4W3	81 aa		5.79	□□□□□ -1.48
GTPBP3-222	ENST00000600625	MT1A	P04731	61 aa		5.76	□□□□□ -1.49
GTPBP3-222	ENST00000600625	PRM1	P04553	51 aa		5.72	□□□□□ -1.49
GTPBP3-222	ENST00000600625	KRTAP9-7	A8MTY7	169 aa		5.71	□□□□□ -1.49
GTPBP3-222	ENST00000600625	LCE3D	Q9BYE3	92 aa		5.67	□□□□□ -1.5
GTPBP3-222	ENST00000600625	MUC12	Q9UKN1	5478 aa		5.67	□□□□□ -1.5
GTPBP3-222	ENST00000600625	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.67	□□□□□ -1.5
GTPBP3-222	ENST00000600625	LCE3E	Q5T5B0	92 aa		5.66	□□□□□ -1.5
GTPBP3-222	ENST00000600625	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.65	□□□□□ -1.5
GTPBP3-222	ENST00000600625	SYNE1	Q8NF91	8797 aa	Known RBP	5.64	□□□□□ -1.51
GTPBP3-222	ENST00000600625	KRTAP9-6	A0A140TA67	174 aa		5.57	□□□□□ -1.52
GTPBP3-222	ENST00000600625	DST	Q03001	7570 aa	Known RBP	5.57	□□□□□ -1.52
GTPBP3-222	ENST00000600625	KRTAP19-6	Q3LI70	58 aa		5.56	□□□□□ -1.52
GTPBP3-222	ENST00000600625	KRTAP6-1	Q3LI64	71 aa		5.5	□□□□□ -1.53
GTPBP3-222	ENST00000600625	LCE5A	Q5TCM9	118 aa		5.49	□□□□□ -1.53
GTPBP3-222	ENST00000600625	KRTAP6-3	Q3LI67	103 aa		5.46	□□□□□ -1.54
GTPBP3-222	ENST00000600625	KRTAP6-2	Q3LI66	62 aa		5.34	□□□□□ -1.55
GTPBP3-222	ENST00000600625	SPRR2F	Q96RM1	72 aa		5.26	□□□□□ -1.57
GTPBP3-222	ENST00000600625	LCE1A	Q5T7P2	110 aa		5.24	□□□□□ -1.57
GTPBP3-222	ENST00000600625	KRTAP2-2	Q9BYT5	123 aa		5.24	□□□□□ -1.57
GTPBP3-222	ENST00000600625	MACF1	Q9UPN3	7388 aa	Known RBP	5.23	□□□□□ -1.57
GTPBP3-222	ENST00000600625	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.22	□□□□□ -1.57
GTPBP3-222	ENST00000600625	SYNE2	Q8WXH0	6885 aa	Known RBP	5.15	□□□□□ -1.58
GTPBP3-222	ENST00000600625	KRTAP9-4	Q9BYQ2	154 aa		5.02	□□□□□ -1.61
GTPBP3-222	ENST00000600625	OBSCN	Q5VST9	7968 aa		4.88	□□□□□ -1.63
GTPBP3-222	ENST00000600625	KRTAP5-9	P26371	169 aa		4.87	□□□□□ -1.63
GTPBP3-222	ENST00000600625	MDN1	Q9NU22	5596 aa		4.82	□□□□□ -1.64
GTPBP3-222	ENST00000600625	SPRR2A	P35326	72 aa		4.82	□□□□□ -1.64
GTPBP3-222	ENST00000600625	MT3	P25713	68 aa		4.8	□□□□□ -1.64
GTPBP3-222	ENST00000600625	LCE1E	Q5T753	118 aa		4.8	□□□□□ -1.64
GTPBP3-222	ENST00000600625	SPRR2E	P22531	72 aa		4.74	□□□□□ -1.65
GTPBP3-222	ENST00000600625	SPRR2B	P35325	72 aa		4.7	□□□□□ -1.66
GTPBP3-222	ENST00000600625	NEB	P20929	6669 aa		4.69	□□□□□ -1.66
GTPBP3-222	ENST00000600625	LCE1D	Q5T752	114 aa		4.64	□□□□□ -1.67
GTPBP3-222	ENST00000600625	SPRR2D	P22532	72 aa		4.53	□□□□□ -1.68
GTPBP3-222	ENST00000600625	KRTAP20-1	Q3LI63	56 aa		4.45	□□□□□ -1.7
GTPBP3-222	ENST00000600625	KRTAP4-11	Q9BYQ6	195 aa		4.26	□□□□□ -1.73
GTPBP3-222	ENST00000600625	MUC5AC	P98088	5654 aa		4.16	□□□□□ -1.74
GTPBP3-222	ENST00000600625	KRTAP5-4	Q6L8H1	288 aa		4.16	□□□□□ -1.74
GTPBP3-222	ENST00000600625	KRTAP5-10	Q6L8G5	202 aa		4.06	□□□□□ -1.76
GTPBP3-222	ENST00000600625	KRTAP4-6	Q9BYQ5	205 aa		4	□□□□□ -1.77
GTPBP3-222	ENST00000600625	MT4	P47944	62 aa		3.98	□□□□□ -1.77
GTPBP3-222	ENST00000600625	LCE4A	Q5TA78	99 aa		3.98	□□□□□ -1.77
GTPBP3-222	ENST00000600625	KRTAP5-2	Q701N4	177 aa		3.98	□□□□□ -1.77
GTPBP3-222	ENST00000600625	HMCN1	Q96RW7	5635 aa		3.89	□□□□□ -1.79
GTPBP3-222	ENST00000600625	KRTAP20-2	Q3LI61	65 aa		3.88	□□□□□ -1.79
GTPBP3-222	ENST00000600625	KRTAP5-1	Q6L8H4	278 aa		3.88	□□□□□ -1.79
GTPBP3-222	ENST00000600625	LCE1B	Q5T7P3	118 aa		3.82	□□□□□ -1.8
GTPBP3-222	ENST00000600625	LCE1F	Q5T754	118 aa		3.78	□□□□□ -1.8
GTPBP3-222	ENST00000600625	KRTAP21-1	Q3LI58	79 aa		3.66	□□□□□ -1.82
GTPBP3-222	ENST00000600625	KRTAP5-3	Q6L8H2	238 aa		3.64	□□□□□ -1.83
GTPBP3-222	ENST00000600625	GPR98	Q8WXG9	6306 aa		3.59	□□□□□ -1.84
GTPBP3-222	ENST00000600625	AHNAK2	Q8IVF2	5795 aa		3.56	□□□□□ -1.84
GTPBP3-222	ENST00000600625	KRTAP4-2	Q9BYR5	136 aa		3.55	□□□□□ -1.84
GTPBP3-222	ENST00000600625	LCE1C	Q5T751	118 aa		3.54	□□□□□ -1.84
GTPBP3-222	ENST00000600625	KRTAP21-2	Q3LI59	83 aa		3.51	□□□□□ -1.85
GTPBP3-222	ENST00000600625	KRTAP5-7	Q6L8G8	165 aa		3.41	□□□□□ -1.86
GTPBP3-222	ENST00000600625	MUC19	Q7Z5P9	8384 aa		3.4	□□□□□ -1.87
GTPBP3-222	ENST00000600625	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.37	□□□□□ -1.87
GTPBP3-222	ENST00000600625	KRTAP4-4	Q9BYR3	166 aa		3.27	□□□□□ -1.89
GTPBP3-222	ENST00000600625	KRTAP5-8	O75690	187 aa		3.24	□□□□□ -1.89
GTPBP3-222	ENST00000600625	KRTAP9-9	Q9BYP9	154 aa		3.11	□□□□□ -1.91
GTPBP3-222	ENST00000600625	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.95	□□□□□ -1.94
GTPBP3-222	ENST00000600625	KRTAP5-11	Q6L8G4	156 aa		2.95	□□□□□ -1.94
GTPBP3-222	ENST00000600625	AHNAK	Q09666	5890 aa	Known RBP	2.94	□□□□□ -1.94
GTPBP3-222	ENST00000600625	KRTAP4-12	Q9BQ66	201 aa		2.81	□□□□□ -1.96
GTPBP3-222	ENST00000600625	PHGR1	C9JFL3	82 aa		2.57	□□□□□ -2
GTPBP3-222	ENST00000600625	MUC16	Q8WXI7	14507 aa		1.85	□□□□□ -2.11

Retrieved 77 of 20,778 RNA–protein pairs in 1376.3 ms