RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 LCE3AQ5TA76 89 aa4.87□□□□□ -1.63
ARHGEF1-222ENST00000600517 A6NED7 52 aa4.86□□□□□ -1.63
ARHGEF1-222ENST00000600517 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
ARHGEF1-222ENST00000600517 PP632Q6XCG6 107 aa4.8□□□□□ -1.64
ARHGEF1-222ENST00000600517 MT1LQ93083 61 aa4.8□□□□□ -1.64
ARHGEF1-222ENST00000600517 CDC42SE1Q9NRR8 79 aa4.77□□□□□ -1.65
ARHGEF1-222ENST00000600517 MT1MQ8N339 61 aa4.76□□□□□ -1.65
ARHGEF1-222ENST00000600517 K7ERS5 55 aa4.72□□□□□ -1.65
ARHGEF1-222ENST00000600517 KRTAP12-3P60328 96 aa4.69□□□□□ -1.66
ARHGEF1-222ENST00000600517 KRTAP25-1Q3LHN0 102 aa4.69□□□□□ -1.66
ARHGEF1-222ENST00000600517 GPR98Q8WXG9 6306 aa4.68□□□□□ -1.66
ARHGEF1-222ENST00000600517 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
ARHGEF1-222ENST00000600517 KRTAP4-9Q9BYQ8 210 aa4.63□□□□□ -1.67
ARHGEF1-222ENST00000600517 LCE4AQ5TA78 99 aa4.57□□□□□ -1.68
ARHGEF1-222ENST00000600517 BRK1Q8WUW1 75 aa4.57□□□□□ -1.68
ARHGEF1-222ENST00000600517 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
ARHGEF1-222ENST00000600517 KRTAP23-1A1A580 65 aa4.54□□□□□ -1.68
ARHGEF1-222ENST00000600517 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
ARHGEF1-222ENST00000600517 ROMO1P60602 79 aa4.51□□□□□ -1.69
ARHGEF1-222ENST00000600517 KRTAP5-4Q6L8H1 288 aa4.51□□□□□ -1.69
ARHGEF1-222ENST00000600517 MT4P47944 62 aa4.48□□□□□ -1.69
ARHGEF1-222ENST00000600517 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
ARHGEF1-222ENST00000600517 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
ARHGEF1-222ENST00000600517 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
ARHGEF1-222ENST00000600517 KRTAP4-6Q9BYQ5 205 aa4.39□□□□□ -1.71
ARHGEF1-222ENST00000600517 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
ARHGEF1-222ENST00000600517 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
ARHGEF1-222ENST00000600517 PRO0628Q9UI54 55 aa4.32□□□□□ -1.72
ARHGEF1-222ENST00000600517 LOC100996750A0A140TA64 210 aa4.31□□□□□ -1.72
ARHGEF1-222ENST00000600517 PMAIP1Q13794 54 aa4.29□□□□□ -1.72
ARHGEF1-222ENST00000600517 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
ARHGEF1-222ENST00000600517 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
ARHGEF1-222ENST00000600517 KRTAP12-4P60329 112 aa4.23□□□□□ -1.73
ARHGEF1-222ENST00000600517 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
ARHGEF1-222ENST00000600517 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
ARHGEF1-222ENST00000600517 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
ARHGEF1-222ENST00000600517 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
ARHGEF1-222ENST00000600517 KRTAP5-3Q6L8H2 238 aa4.13□□□□□ -1.75
ARHGEF1-222ENST00000600517 KRTAP9-6A8MVA2 160 aa4.09□□□□□ -1.75
ARHGEF1-222ENST00000600517 MT1AP04731 61 aa4.09□□□□□ -1.75
ARHGEF1-222ENST00000600517 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
ARHGEF1-222ENST00000600517 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
ARHGEF1-222ENST00000600517 KRTAP5-7Q6L8G8 165 aa4.01□□□□□ -1.77
ARHGEF1-222ENST00000600517 KRTAP5-2Q701N4 177 aa3.96□□□□□ -1.78
ARHGEF1-222ENST00000600517 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
ARHGEF1-222ENST00000600517 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
ARHGEF1-222ENST00000600517 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
ARHGEF1-222ENST00000600517 SVIPQ8NHG7 77 aa3.77□□□□□ -1.81
ARHGEF1-222ENST00000600517 MT3P25713 68 aa3.74□□□□□ -1.81
ARHGEF1-222ENST00000600517 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
ARHGEF1-222ENST00000600517 OBSCNQ5VST9 7968 aa3.68□□□□□ -1.82
ARHGEF1-222ENST00000600517 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
ARHGEF1-222ENST00000600517 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
ARHGEF1-222ENST00000600517 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
ARHGEF1-222ENST00000600517 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
ARHGEF1-222ENST00000600517 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
ARHGEF1-222ENST00000600517 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
ARHGEF1-222ENST00000600517 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
ARHGEF1-222ENST00000600517 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
ARHGEF1-222ENST00000600517 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
ARHGEF1-222ENST00000600517 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
ARHGEF1-222ENST00000600517 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
ARHGEF1-222ENST00000600517 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
ARHGEF1-222ENST00000600517 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
ARHGEF1-222ENST00000600517 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
ARHGEF1-222ENST00000600517 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
ARHGEF1-222ENST00000600517 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
ARHGEF1-222ENST00000600517 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
ARHGEF1-222ENST00000600517 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
ARHGEF1-222ENST00000600517 A0A0A0MQY5 61 aa2.52□□□□□ -2.01
ARHGEF1-222ENST00000600517 INE1O15225 51 aa2.49□□□□□ -2.01
ARHGEF1-222ENST00000600517 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
ARHGEF1-222ENST00000600517 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
ARHGEF1-222ENST00000600517 PRM1P04553 51 aa2.35□□□□□ -2.03
ARHGEF1-222ENST00000600517 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
ARHGEF1-222ENST00000600517 H3BS24 57 aa2.13□□□□□ -2.07
ARHGEF1-222ENST00000600517 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
ARHGEF1-222ENST00000600517 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms