RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	LCE3A	Q5TA76	89 aa		4.87	□□□□□ -1.63
ARHGEF1-222	ENST00000600517		A6NED7	52 aa		4.86	□□□□□ -1.63
ARHGEF1-222	ENST00000600517	DST	Q03001	7570 aa	Known RBP	4.83	□□□□□ -1.64
ARHGEF1-222	ENST00000600517	PP632	Q6XCG6	107 aa		4.8	□□□□□ -1.64
ARHGEF1-222	ENST00000600517	MT1L	Q93083	61 aa		4.8	□□□□□ -1.64
ARHGEF1-222	ENST00000600517	CDC42SE1	Q9NRR8	79 aa		4.77	□□□□□ -1.65
ARHGEF1-222	ENST00000600517	MT1M	Q8N339	61 aa		4.76	□□□□□ -1.65
ARHGEF1-222	ENST00000600517		K7ERS5	55 aa		4.72	□□□□□ -1.65
ARHGEF1-222	ENST00000600517	KRTAP12-3	P60328	96 aa		4.69	□□□□□ -1.66
ARHGEF1-222	ENST00000600517	KRTAP25-1	Q3LHN0	102 aa		4.69	□□□□□ -1.66
ARHGEF1-222	ENST00000600517	GPR98	Q8WXG9	6306 aa		4.68	□□□□□ -1.66
ARHGEF1-222	ENST00000600517	KRTAP4-3	Q9BYR4	195 aa		4.64	□□□□□ -1.67
ARHGEF1-222	ENST00000600517	KRTAP4-9	Q9BYQ8	210 aa		4.63	□□□□□ -1.67
ARHGEF1-222	ENST00000600517	LCE4A	Q5TA78	99 aa		4.57	□□□□□ -1.68
ARHGEF1-222	ENST00000600517	BRK1	Q8WUW1	75 aa		4.57	□□□□□ -1.68
ARHGEF1-222	ENST00000600517	KRTAP4-7	Q9BYR0	210 aa		4.57	□□□□□ -1.68
ARHGEF1-222	ENST00000600517	KRTAP23-1	A1A580	65 aa		4.54	□□□□□ -1.68
ARHGEF1-222	ENST00000600517	LCE1D	Q5T752	114 aa		4.53	□□□□□ -1.68
ARHGEF1-222	ENST00000600517	ROMO1	P60602	79 aa		4.51	□□□□□ -1.69
ARHGEF1-222	ENST00000600517	KRTAP5-4	Q6L8H1	288 aa		4.51	□□□□□ -1.69
ARHGEF1-222	ENST00000600517	MT4	P47944	62 aa		4.48	□□□□□ -1.69
ARHGEF1-222	ENST00000600517	KRTAP19-4	Q3LI73	84 aa		4.48	□□□□□ -1.69
ARHGEF1-222	ENST00000600517	HMCN1	Q96RW7	5635 aa		4.45	□□□□□ -1.7
ARHGEF1-222	ENST00000600517	KRTAP15-1	Q3LI76	137 aa		4.42	□□□□□ -1.7
ARHGEF1-222	ENST00000600517	KRTAP4-6	Q9BYQ5	205 aa		4.39	□□□□□ -1.71
ARHGEF1-222	ENST00000600517	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.37	□□□□□ -1.71
ARHGEF1-222	ENST00000600517	LCE3C	Q5T5A8	94 aa		4.34	□□□□□ -1.71
ARHGEF1-222	ENST00000600517	PRO0628	Q9UI54	55 aa		4.32	□□□□□ -1.72
ARHGEF1-222	ENST00000600517	LOC100996750	A0A140TA64	210 aa		4.31	□□□□□ -1.72
ARHGEF1-222	ENST00000600517	PMAIP1	Q13794	54 aa		4.29	□□□□□ -1.72
ARHGEF1-222	ENST00000600517	SPRR5	A0A1B0GTR4	108 aa		4.25	□□□□□ -1.73
ARHGEF1-222	ENST00000600517	AHNAK2	Q8IVF2	5795 aa		4.24	□□□□□ -1.73
ARHGEF1-222	ENST00000600517	KRTAP12-4	P60329	112 aa		4.23	□□□□□ -1.73
ARHGEF1-222	ENST00000600517	KRTAP20-2	Q3LI61	65 aa		4.23	□□□□□ -1.73
ARHGEF1-222	ENST00000600517	SYNE1	Q8NF91	8797 aa	Known RBP	4.2	□□□□□ -1.74
ARHGEF1-222	ENST00000600517	KRTAP5-10	Q6L8G5	202 aa		4.17	□□□□□ -1.74
ARHGEF1-222	ENST00000600517	PRAC1	Q96KF2	57 aa		4.14	□□□□□ -1.75
ARHGEF1-222	ENST00000600517	KRTAP5-3	Q6L8H2	238 aa		4.13	□□□□□ -1.75
ARHGEF1-222	ENST00000600517	KRTAP9-6	A8MVA2	160 aa		4.09	□□□□□ -1.75
ARHGEF1-222	ENST00000600517	MT1A	P04731	61 aa		4.09	□□□□□ -1.75
ARHGEF1-222	ENST00000600517	KRTAP6-1	Q3LI64	71 aa		4.05	□□□□□ -1.76
ARHGEF1-222	ENST00000600517	KTN1-AS1	Q86SY8	53 aa		4.05	□□□□□ -1.76
ARHGEF1-222	ENST00000600517	KRTAP5-7	Q6L8G8	165 aa		4.01	□□□□□ -1.77
ARHGEF1-222	ENST00000600517	KRTAP5-2	Q701N4	177 aa		3.96	□□□□□ -1.78
ARHGEF1-222	ENST00000600517	KRTAP9-4	Q9BYQ2	154 aa		3.95	□□□□□ -1.78
ARHGEF1-222	ENST00000600517	KRTAP6-2	Q3LI66	62 aa		3.86	□□□□□ -1.79
ARHGEF1-222	ENST00000600517	KRTAP4-11	Q9BYQ6	195 aa		3.85	□□□□□ -1.79
ARHGEF1-222	ENST00000600517	SVIP	Q8NHG7	77 aa		3.77	□□□□□ -1.81
ARHGEF1-222	ENST00000600517	MT3	P25713	68 aa		3.74	□□□□□ -1.81
ARHGEF1-222	ENST00000600517	KRTAP5-8	O75690	187 aa		3.73	□□□□□ -1.81
ARHGEF1-222	ENST00000600517	OBSCN	Q5VST9	7968 aa		3.68	□□□□□ -1.82
ARHGEF1-222	ENST00000600517	AHNAK	Q09666	5890 aa	Known RBP	3.57	□□□□□ -1.84
ARHGEF1-222	ENST00000600517	KRTAP5-1	Q6L8H4	278 aa		3.54	□□□□□ -1.84
ARHGEF1-222	ENST00000600517	MUC5AC	P98088	5654 aa		3.53	□□□□□ -1.84
ARHGEF1-222	ENST00000600517	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.5	□□□□□ -1.85
ARHGEF1-222	ENST00000600517	KRTAP9-9	Q9BYP9	154 aa		3.5	□□□□□ -1.85
ARHGEF1-222	ENST00000600517	LCE1E	Q5T753	118 aa		3.44	□□□□□ -1.86
ARHGEF1-222	ENST00000600517	LUZP6	Q538Z0	58 aa		3.29	□□□□□ -1.88
ARHGEF1-222	ENST00000600517	KRTAP4-2	Q9BYR5	136 aa		3.22	□□□□□ -1.89
ARHGEF1-222	ENST00000600517	LCE1C	Q5T751	118 aa		3.19	□□□□□ -1.9
ARHGEF1-222	ENST00000600517	LCE1B	Q5T7P3	118 aa		3.19	□□□□□ -1.9
ARHGEF1-222	ENST00000600517	LCE3D	Q9BYE3	92 aa		3.14	□□□□□ -1.91
ARHGEF1-222	ENST00000600517	NDUFAF8	A1L188	74 aa		3.06	□□□□□ -1.92
ARHGEF1-222	ENST00000600517	LCE3E	Q5T5B0	92 aa		2.97	□□□□□ -1.93
ARHGEF1-222	ENST00000600517	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.91	□□□□□ -1.94
ARHGEF1-222	ENST00000600517	KRTAP4-12	Q9BQ66	201 aa		2.88	□□□□□ -1.95
ARHGEF1-222	ENST00000600517	KRTAP5-11	Q6L8G4	156 aa		2.86	□□□□□ -1.95
ARHGEF1-222	ENST00000600517	LCE1F	Q5T754	118 aa		2.78	□□□□□ -1.96
ARHGEF1-222	ENST00000600517	KRTAP21-2	Q3LI59	83 aa		2.69	□□□□□ -1.98
ARHGEF1-222	ENST00000600517		A0A0A0MQY5	61 aa		2.52	□□□□□ -2.01
ARHGEF1-222	ENST00000600517	INE1	O15225	51 aa		2.49	□□□□□ -2.01
ARHGEF1-222	ENST00000600517	PHGR1	C9JFL3	82 aa		2.47	□□□□□ -2.01
ARHGEF1-222	ENST00000600517	KRTAP4-4	Q9BYR3	166 aa		2.42	□□□□□ -2.02
ARHGEF1-222	ENST00000600517	PRM1	P04553	51 aa		2.35	□□□□□ -2.03
ARHGEF1-222	ENST00000600517	MUC19	Q7Z5P9	8384 aa		2.27	□□□□□ -2.05
ARHGEF1-222	ENST00000600517		H3BS24	57 aa		2.13	□□□□□ -2.07
ARHGEF1-222	ENST00000600517	KRTAP21-1	Q3LI58	79 aa		1.84	□□□□□ -2.11
ARHGEF1-222	ENST00000600517	MUC16	Q8WXI7	14507 aa		1.57	□□□□□ -2.16

Retrieved 78 of 20,778 RNA–protein pairs in 123.4 ms