RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 SPRR2BP35325 72 aa4.48□□□□□ -1.69
TGFB1-204ENST00000600196 SPRR2AP35326 72 aa4.48□□□□□ -1.69
TGFB1-204ENST00000600196 MDN1Q9NU22 5596 aa4.46□□□□□ -1.7
TGFB1-204ENST00000600196 MT1GP13640 62 aa4.44□□□□□ -1.7
TGFB1-204ENST00000600196 KRTAP19-3Q7Z4W3 81 aa4.44□□□□□ -1.7
TGFB1-204ENST00000600196 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
TGFB1-204ENST00000600196 MT1LQ93083 61 aa4.39□□□□□ -1.71
TGFB1-204ENST00000600196 KRTAP15-1Q3LI76 137 aa4.35□□□□□ -1.71
TGFB1-204ENST00000600196 SPRR2DP22532 72 aa4.33□□□□□ -1.72
TGFB1-204ENST00000600196 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
TGFB1-204ENST00000600196 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
TGFB1-204ENST00000600196 MT1MQ8N339 61 aa4.28□□□□□ -1.72
TGFB1-204ENST00000600196 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
TGFB1-204ENST00000600196 KRTAP20-1Q3LI63 56 aa4.26□□□□□ -1.73
TGFB1-204ENST00000600196 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
TGFB1-204ENST00000600196 KRTAP2-1Q9BYU5 128 aa4.2□□□□□ -1.74
TGFB1-204ENST00000600196 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
TGFB1-204ENST00000600196 LCE3BQ5TA77 95 aa4.19□□□□□ -1.74
TGFB1-204ENST00000600196 SVIPQ8NHG7 77 aa4.16□□□□□ -1.74
TGFB1-204ENST00000600196 PRAC1Q96KF2 57 aa4.16□□□□□ -1.74
TGFB1-204ENST00000600196 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.75
TGFB1-204ENST00000600196 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
TGFB1-204ENST00000600196 KRTAP4-3Q9BYR4 195 aa4.05□□□□□ -1.76
TGFB1-204ENST00000600196 LCE4AQ5TA78 99 aa3.95□□□□□ -1.78
TGFB1-204ENST00000600196 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
TGFB1-204ENST00000600196 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
TGFB1-204ENST00000600196 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
TGFB1-204ENST00000600196 LOC100996750A0A140TA64 210 aa3.85□□□□□ -1.79
TGFB1-204ENST00000600196 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
TGFB1-204ENST00000600196 MT1AP04731 61 aa3.78□□□□□ -1.8
TGFB1-204ENST00000600196 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
TGFB1-204ENST00000600196 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
TGFB1-204ENST00000600196 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
TGFB1-204ENST00000600196 MT4P47944 62 aa3.7□□□□□ -1.82
TGFB1-204ENST00000600196 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
TGFB1-204ENST00000600196 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
TGFB1-204ENST00000600196 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
TGFB1-204ENST00000600196 KRTAP4-6Q9BYQ5 205 aa3.66□□□□□ -1.82
TGFB1-204ENST00000600196 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
TGFB1-204ENST00000600196 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
TGFB1-204ENST00000600196 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
TGFB1-204ENST00000600196 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
TGFB1-204ENST00000600196 KRTAP5-2Q701N4 177 aa3.5□□□□□ -1.85
TGFB1-204ENST00000600196 MT3P25713 68 aa3.47□□□□□ -1.85
TGFB1-204ENST00000600196 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
TGFB1-204ENST00000600196 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
TGFB1-204ENST00000600196 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
TGFB1-204ENST00000600196 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
TGFB1-204ENST00000600196 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
TGFB1-204ENST00000600196 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
TGFB1-204ENST00000600196 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
TGFB1-204ENST00000600196 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
TGFB1-204ENST00000600196 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
TGFB1-204ENST00000600196 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
TGFB1-204ENST00000600196 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
TGFB1-204ENST00000600196 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
TGFB1-204ENST00000600196 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
TGFB1-204ENST00000600196 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
TGFB1-204ENST00000600196 MUC5ACP98088 5654 aa2.9□□□□□ -1.94
TGFB1-204ENST00000600196 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
TGFB1-204ENST00000600196 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
TGFB1-204ENST00000600196 H3BS24 57 aa2.86□□□□□ -1.95
TGFB1-204ENST00000600196 A0A0A0MQY5 61 aa2.83□□□□□ -1.96
TGFB1-204ENST00000600196 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
TGFB1-204ENST00000600196 INE1O15225 51 aa2.77□□□□□ -1.97
TGFB1-204ENST00000600196 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
TGFB1-204ENST00000600196 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
TGFB1-204ENST00000600196 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
TGFB1-204ENST00000600196 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
TGFB1-204ENST00000600196 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
TGFB1-204ENST00000600196 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
TGFB1-204ENST00000600196 PRM1P04553 51 aa2.38□□□□□ -2.03
TGFB1-204ENST00000600196 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
TGFB1-204ENST00000600196 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
TGFB1-204ENST00000600196 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
TGFB1-204ENST00000600196 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
TGFB1-204ENST00000600196 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
TGFB1-204ENST00000600196 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 48.7 ms