RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	KRTAP23-1	A1A580	65 aa		8.25	□□□□□ -1.09
LTBP4-227	ENST00000600026	LCE1A	Q5T7P2	110 aa		8.24	□□□□□ -1.09
LTBP4-227	ENST00000600026	KRTAP19-7	Q3SYF9	63 aa		8.21	□□□□□ -1.1
LTBP4-227	ENST00000600026	PP632	Q6XCG6	107 aa		8.16	□□□□□ -1.1
LTBP4-227	ENST00000600026	GPR98	Q8WXG9	6306 aa		8.16	□□□□□ -1.1
LTBP4-227	ENST00000600026	KRTAP19-5	Q3LI72	72 aa		8.14	□□□□□ -1.11
LTBP4-227	ENST00000600026	SPRR2D	P22532	72 aa		8.13	□□□□□ -1.11
LTBP4-227	ENST00000600026	MT1E	P04732	61 aa		8.11	□□□□□ -1.11
LTBP4-227	ENST00000600026	KRTAP12-3	P60328	96 aa		8.03	□□□□□ -1.12
LTBP4-227	ENST00000600026	LCE3B	Q5TA77	95 aa		7.98	□□□□□ -1.13
LTBP4-227	ENST00000600026	KRTAP19-3	Q7Z4W3	81 aa		7.94	□□□□□ -1.14
LTBP4-227	ENST00000600026	KTN1-AS1	Q86SY8	53 aa		7.89	□□□□□ -1.15
LTBP4-227	ENST00000600026	LCE5A	Q5TCM9	118 aa		7.88	□□□□□ -1.15
LTBP4-227	ENST00000600026	PRAC1	Q96KF2	57 aa		7.87	□□□□□ -1.15
LTBP4-227	ENST00000600026	MT1L	Q93083	61 aa		7.83	□□□□□ -1.16
LTBP4-227	ENST00000600026	MT1G	P13640	62 aa		7.78	□□□□□ -1.16
LTBP4-227	ENST00000600026	KRTAP15-1	Q3LI76	137 aa		7.76	□□□□□ -1.17
LTBP4-227	ENST00000600026	KRTAP4-9	Q9BYQ8	210 aa		7.75	□□□□□ -1.17
LTBP4-227	ENST00000600026	DST	Q03001	7570 aa	Known RBP	7.73	□□□□□ -1.17
LTBP4-227	ENST00000600026	MT1M	Q8N339	61 aa		7.69	□□□□□ -1.18
LTBP4-227	ENST00000600026	KRTAP19-4	Q3LI73	84 aa		7.65	□□□□□ -1.18
LTBP4-227	ENST00000600026	KRTAP4-3	Q9BYR4	195 aa		7.51	□□□□□ -1.21
LTBP4-227	ENST00000600026	SVIP	Q8NHG7	77 aa		7.49	□□□□□ -1.21
LTBP4-227	ENST00000600026	KRTAP4-7	Q9BYR0	210 aa		7.48	□□□□□ -1.21
LTBP4-227	ENST00000600026	LCE3C	Q5T5A8	94 aa		7.46	□□□□□ -1.22
LTBP4-227	ENST00000600026	LCE1D	Q5T752	114 aa		7.4	□□□□□ -1.22
LTBP4-227	ENST00000600026	HMCN1	Q96RW7	5635 aa		7.31	□□□□□ -1.24
LTBP4-227	ENST00000600026	KRTAP5-10	Q6L8G5	202 aa		7.26	□□□□□ -1.25
LTBP4-227	ENST00000600026	AHNAK2	Q8IVF2	5795 aa		7.24	□□□□□ -1.25
LTBP4-227	ENST00000600026	MT4	P47944	62 aa		7.24	□□□□□ -1.25
LTBP4-227	ENST00000600026	LCE4A	Q5TA78	99 aa		7.08	□□□□□ -1.28
LTBP4-227	ENST00000600026	LOC100996750	A0A140TA64	210 aa		7.07	□□□□□ -1.28
LTBP4-227	ENST00000600026	KRTAP5-7	Q6L8G8	165 aa		7.03	□□□□□ -1.28
LTBP4-227	ENST00000600026	KRTAP5-4	Q6L8H1	288 aa		7.03	□□□□□ -1.28
LTBP4-227	ENST00000600026	KRTAP5-5	Q701N2	237 aa	Predicted RBP	7	□□□□□ -1.29
LTBP4-227	ENST00000600026	KRTAP4-6	Q9BYQ5	205 aa		7	□□□□□ -1.29
LTBP4-227	ENST00000600026	KRTAP9-6	A8MVA2	160 aa		6.97	□□□□□ -1.29
LTBP4-227	ENST00000600026	SPRR5	A0A1B0GTR4	108 aa		6.96	□□□□□ -1.3
LTBP4-227	ENST00000600026	KRTAP5-3	Q6L8H2	238 aa		6.91	□□□□□ -1.3
LTBP4-227	ENST00000600026	SYNE1	Q8NF91	8797 aa	Known RBP	6.69	□□□□□ -1.34
LTBP4-227	ENST00000600026	MT1A	P04731	61 aa		6.67	□□□□□ -1.34
LTBP4-227	ENST00000600026	KRTAP12-4	P60329	112 aa		6.66	□□□□□ -1.34
LTBP4-227	ENST00000600026	KRTAP20-2	Q3LI61	65 aa		6.61	□□□□□ -1.35
LTBP4-227	ENST00000600026	KRTAP6-1	Q3LI64	71 aa		6.61	□□□□□ -1.35
LTBP4-227	ENST00000600026	LUZP6	Q538Z0	58 aa		6.58	□□□□□ -1.36
LTBP4-227	ENST00000600026	KRTAP9-4	Q9BYQ2	154 aa		6.39	□□□□□ -1.39
LTBP4-227	ENST00000600026	KRTAP5-2	Q701N4	177 aa		6.26	□□□□□ -1.41
LTBP4-227	ENST00000600026	KRTAP6-2	Q3LI66	62 aa		6.2	□□□□□ -1.42
LTBP4-227	ENST00000600026	KRTAP4-11	Q9BYQ6	195 aa		6.16	□□□□□ -1.42
LTBP4-227	ENST00000600026	MUC5AC	P98088	5654 aa		6.14	□□□□□ -1.43
LTBP4-227	ENST00000600026	AHNAK	Q09666	5890 aa	Known RBP	6.14	□□□□□ -1.43
LTBP4-227	ENST00000600026	MT3	P25713	68 aa		6.09	□□□□□ -1.43
LTBP4-227	ENST00000600026	MUC5B	Q9HC84	5762 aa	Predicted RBP	6.06	□□□□□ -1.44
LTBP4-227	ENST00000600026	KRTAP5-8	O75690	187 aa		6.05	□□□□□ -1.44
LTBP4-227	ENST00000600026	NDUFAF8	A1L188	74 aa		6.02	□□□□□ -1.45
LTBP4-227	ENST00000600026	KRTAP4-12	Q9BQ66	201 aa		5.75	□□□□□ -1.49
LTBP4-227	ENST00000600026	OBSCN	Q5VST9	7968 aa		5.74	□□□□□ -1.49
LTBP4-227	ENST00000600026	KRTAP9-9	Q9BYP9	154 aa		5.74	□□□□□ -1.49
LTBP4-227	ENST00000600026	LCE3D	Q9BYE3	92 aa		5.55	□□□□□ -1.52
LTBP4-227	ENST00000600026	KRTAP5-1	Q6L8H4	278 aa		5.51	□□□□□ -1.53
LTBP4-227	ENST00000600026	LCE1E	Q5T753	118 aa		5.43	□□□□□ -1.54
LTBP4-227	ENST00000600026	LCE3E	Q5T5B0	92 aa		5.35	□□□□□ -1.55
LTBP4-227	ENST00000600026		A0A0A0MQY5	61 aa		5.24	□□□□□ -1.57
LTBP4-227	ENST00000600026	KRTAP4-2	Q9BYR5	136 aa		5.14	□□□□□ -1.59
LTBP4-227	ENST00000600026	LCE1B	Q5T7P3	118 aa		5.1	□□□□□ -1.59
LTBP4-227	ENST00000600026	LCE1C	Q5T751	118 aa		5.04	□□□□□ -1.6
LTBP4-227	ENST00000600026	INE1	O15225	51 aa		5	□□□□□ -1.61
LTBP4-227	ENST00000600026		H3BS24	57 aa		4.79	□□□□□ -1.64
LTBP4-227	ENST00000600026	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.67	□□□□□ -1.66
LTBP4-227	ENST00000600026	KRTAP5-11	Q6L8G4	156 aa		4.54	□□□□□ -1.68
LTBP4-227	ENST00000600026	PRM1	P04553	51 aa		4.42	□□□□□ -1.7
LTBP4-227	ENST00000600026	KRTAP21-2	Q3LI59	83 aa		4.34	□□□□□ -1.71
LTBP4-227	ENST00000600026	LCE1F	Q5T754	118 aa		4.28	□□□□□ -1.72
LTBP4-227	ENST00000600026	PHGR1	C9JFL3	82 aa		4.24	□□□□□ -1.73
LTBP4-227	ENST00000600026	KRTAP4-4	Q9BYR3	166 aa		3.91	□□□□□ -1.78
LTBP4-227	ENST00000600026	MUC19	Q7Z5P9	8384 aa		3.59	□□□□□ -1.83
LTBP4-227	ENST00000600026	KRTAP21-1	Q3LI58	79 aa		3.17	□□□□□ -1.9
LTBP4-227	ENST00000600026	MUC16	Q8WXI7	14507 aa		2.51	□□□□□ -2.01

Retrieved 78 of 20,778 RNA–protein pairs in 13.1 ms