RNA–Protein interactions for RNA: ENST00000598127.1

PAF1-207, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-207ENST00000598127 LCE3BQ5TA77 95 aa7.59□□□□□ -1.19
PAF1-207ENST00000598127 A6NED7 52 aa7.54□□□□□ -1.2
PAF1-207ENST00000598127 MT1GP13640 62 aa7.49□□□□□ -1.21
PAF1-207ENST00000598127 KRTAP25-1Q3LHN0 102 aa7.44□□□□□ -1.22
PAF1-207ENST00000598127 MT1LQ93083 61 aa7.42□□□□□ -1.22
PAF1-207ENST00000598127 PP632Q6XCG6 107 aa7.41□□□□□ -1.22
PAF1-207ENST00000598127 KRTAP12-3P60328 96 aa7.33□□□□□ -1.24
PAF1-207ENST00000598127 MT1MQ8N339 61 aa7.33□□□□□ -1.24
PAF1-207ENST00000598127 CDC42SE1Q9NRR8 79 aa7.33□□□□□ -1.24
PAF1-207ENST00000598127 DSTQ03001 7570 aaKnown RBP7.32□□□□□ -1.24
PAF1-207ENST00000598127 KRTAP23-1A1A580 65 aa7.2□□□□□ -1.26
PAF1-207ENST00000598127 KRTAP4-3Q9BYR4 195 aa7.13□□□□□ -1.27
PAF1-207ENST00000598127 ROMO1P60602 79 aa7.11□□□□□ -1.27
PAF1-207ENST00000598127 KRTAP4-7Q9BYR0 210 aa7.06□□□□□ -1.28
PAF1-207ENST00000598127 KRTAP19-4Q3LI73 84 aa7□□□□□ -1.29
PAF1-207ENST00000598127 KRTAP4-9Q9BYQ8 210 aa6.98□□□□□ -1.29
PAF1-207ENST00000598127 LCE4AQ5TA78 99 aa6.95□□□□□ -1.3
PAF1-207ENST00000598127 KRTAP15-1Q3LI76 137 aa6.94□□□□□ -1.3
PAF1-207ENST00000598127 BRK1Q8WUW1 75 aa6.94□□□□□ -1.3
PAF1-207ENST00000598127 KRTAP5-4Q6L8H1 288 aa6.87□□□□□ -1.31
PAF1-207ENST00000598127 LCE1DQ5T752 114 aa6.86□□□□□ -1.31
PAF1-207ENST00000598127 MT4P47944 62 aa6.8□□□□□ -1.32
PAF1-207ENST00000598127 LCE3CQ5T5A8 94 aa6.78□□□□□ -1.32
PAF1-207ENST00000598127 KRTAP5-5Q701N2 237 aaPredicted RBP6.7□□□□□ -1.34
PAF1-207ENST00000598127 LOC100996750A0A140TA64 210 aa6.67□□□□□ -1.34
PAF1-207ENST00000598127 KRTAP4-6Q9BYQ5 205 aa6.66□□□□□ -1.34
PAF1-207ENST00000598127 HMCN1Q96RW7 5635 aa6.65□□□□□ -1.35
PAF1-207ENST00000598127 PMAIP1Q13794 54 aa6.58□□□□□ -1.36
PAF1-207ENST00000598127 PRO0628Q9UI54 55 aa6.5□□□□□ -1.37
PAF1-207ENST00000598127 KRTAP12-4P60329 112 aa6.49□□□□□ -1.37
PAF1-207ENST00000598127 SPRR5A0A1B0GTR4 108 aa6.47□□□□□ -1.37
PAF1-207ENST00000598127 KRTAP20-2Q3LI61 65 aa6.45□□□□□ -1.38
PAF1-207ENST00000598127 GPR98Q8WXG9 6306 aa6.41□□□□□ -1.38
PAF1-207ENST00000598127 SYNE1Q8NF91 8797 aaKnown RBP6.4□□□□□ -1.38
PAF1-207ENST00000598127 KRTAP9-6A8MVA2 160 aa6.38□□□□□ -1.39
PAF1-207ENST00000598127 MT1AP04731 61 aa6.32□□□□□ -1.4
PAF1-207ENST00000598127 AHNAK2Q8IVF2 5795 aa6.3□□□□□ -1.4
PAF1-207ENST00000598127 KRTAP6-1Q3LI64 71 aa6.26□□□□□ -1.41
PAF1-207ENST00000598127 KRTAP5-3Q6L8H2 238 aa6.26□□□□□ -1.41
PAF1-207ENST00000598127 KRTAP5-10Q6L8G5 202 aa6.25□□□□□ -1.41
PAF1-207ENST00000598127 PRAC1Q96KF2 57 aa6.14□□□□□ -1.43
PAF1-207ENST00000598127 KTN1-AS1Q86SY8 53 aa6.1□□□□□ -1.43
PAF1-207ENST00000598127 KRTAP9-4Q9BYQ2 154 aa6.1□□□□□ -1.43
PAF1-207ENST00000598127 KRTAP5-2Q701N4 177 aa6.06□□□□□ -1.44
PAF1-207ENST00000598127 KRTAP5-7Q6L8G8 165 aa5.98□□□□□ -1.45
PAF1-207ENST00000598127 KRTAP6-2Q3LI66 62 aa5.93□□□□□ -1.46
PAF1-207ENST00000598127 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
PAF1-207ENST00000598127 MT3P25713 68 aa5.79□□□□□ -1.48
PAF1-207ENST00000598127 SVIPQ8NHG7 77 aa5.73□□□□□ -1.49
PAF1-207ENST00000598127 KRTAP5-8O75690 187 aa5.63□□□□□ -1.51
PAF1-207ENST00000598127 OBSCNQ5VST9 7968 aa5.6□□□□□ -1.51
PAF1-207ENST00000598127 KRTAP5-1Q6L8H4 278 aa5.38□□□□□ -1.55
PAF1-207ENST00000598127 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
PAF1-207ENST00000598127 LCE1EQ5T753 118 aa5.27□□□□□ -1.57
PAF1-207ENST00000598127 LUZP6Q538Z0 58 aa5.24□□□□□ -1.57
PAF1-207ENST00000598127 MUC5ACP98088 5654 aa5.14□□□□□ -1.59
PAF1-207ENST00000598127 MUC5BQ9HC84 5762 aaPredicted RBP5.13□□□□□ -1.59
PAF1-207ENST00000598127 AHNAKQ09666 5890 aaKnown RBP5.04□□□□□ -1.6
PAF1-207ENST00000598127 LCE3DQ9BYE3 92 aa4.94□□□□□ -1.62
PAF1-207ENST00000598127 KRTAP4-2Q9BYR5 136 aa4.92□□□□□ -1.62
PAF1-207ENST00000598127 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.63
PAF1-207ENST00000598127 LCE1CQ5T751 118 aa4.88□□□□□ -1.63
PAF1-207ENST00000598127 LCE3EQ5T5B0 92 aa4.69□□□□□ -1.66
PAF1-207ENST00000598127 KRTAP4-12Q9BQ66 201 aa4.6□□□□□ -1.67
PAF1-207ENST00000598127 NDUFAF8A1L188 74 aa4.55□□□□□ -1.68
PAF1-207ENST00000598127 H3BS24 57 aa4.52□□□□□ -1.69
PAF1-207ENST00000598127 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
PAF1-207ENST00000598127 KRTAP5-11Q6L8G4 156 aa4.39□□□□□ -1.71
PAF1-207ENST00000598127 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
PAF1-207ENST00000598127 KRTAP21-2Q3LI59 83 aa4.13□□□□□ -1.75
PAF1-207ENST00000598127 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
PAF1-207ENST00000598127 INE1O15225 51 aa3.84□□□□□ -1.79
PAF1-207ENST00000598127 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
PAF1-207ENST00000598127 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
PAF1-207ENST00000598127 PRM1P04553 51 aa3.64□□□□□ -1.83
PAF1-207ENST00000598127 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
PAF1-207ENST00000598127 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
PAF1-207ENST00000598127 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 18.6 ms