RNA–Protein interactions for RNA: ENST00000596802.5

SIN3B-209, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best) BASIC

Gene SIN3B, Length 2,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-209ENST00000596802 CRCT1Q9UGL9 99 aa7.55□□□□□ -1.2
SIN3B-209ENST00000596802 MT1EP04732 61 aa7.48□□□□□ -1.21
SIN3B-209ENST00000596802 KRTAP19-6Q3LI70 58 aa7.45□□□□□ -1.22
SIN3B-209ENST00000596802 KRTAP9-6A0A140TA67 174 aa7.44□□□□□ -1.22
SIN3B-209ENST00000596802 KRTAP12-4P60329 112 aa7.44□□□□□ -1.22
SIN3B-209ENST00000596802 FCGBPQ9Y6R7 5405 aaPredicted RBP7.36□□□□□ -1.23
SIN3B-209ENST00000596802 LOC100996750A0A140TA64 210 aa7.34□□□□□ -1.23
SIN3B-209ENST00000596802 KRTAP4-3Q9BYR4 195 aa7.2□□□□□ -1.26
SIN3B-209ENST00000596802 MT1GP13640 62 aa7.18□□□□□ -1.26
SIN3B-209ENST00000596802 MACF1Q9UPN3 7388 aaKnown RBP7.03□□□□□ -1.28
SIN3B-209ENST00000596802 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.02□□□□□ -1.29
SIN3B-209ENST00000596802 MT1MQ8N339 61 aa6.94□□□□□ -1.3
SIN3B-209ENST00000596802 SYNE2Q8WXH0 6885 aaKnown RBP6.89□□□□□ -1.31
SIN3B-209ENST00000596802 KRTAP4-9Q9BYQ8 210 aa6.86□□□□□ -1.31
SIN3B-209ENST00000596802 LCE3BQ5TA77 95 aa6.83□□□□□ -1.32
SIN3B-209ENST00000596802 KRTAP19-3Q7Z4W3 81 aa6.82□□□□□ -1.32
SIN3B-209ENST00000596802 MUC12Q9UKN1 5478 aa6.77□□□□□ -1.33
SIN3B-209ENST00000596802 KRTAP9-7A8MTY7 169 aa6.75□□□□□ -1.33
SIN3B-209ENST00000596802 SYNE1Q8NF91 8797 aaKnown RBP6.74□□□□□ -1.33
SIN3B-209ENST00000596802 MT1AP04731 61 aa6.73□□□□□ -1.33
SIN3B-209ENST00000596802 KRTAP6-3Q3LI67 103 aa6.7□□□□□ -1.34
SIN3B-209ENST00000596802 PRM1P04553 51 aa6.69□□□□□ -1.34
SIN3B-209ENST00000596802 KRTAP5-5Q701N2 237 aaPredicted RBP6.67□□□□□ -1.34
SIN3B-209ENST00000596802 DSTQ03001 7570 aaKnown RBP6.64□□□□□ -1.35
SIN3B-209ENST00000596802 KRTAP5-9P26371 169 aa6.63□□□□□ -1.35
SIN3B-209ENST00000596802 LCE3DQ9BYE3 92 aa6.62□□□□□ -1.35
SIN3B-209ENST00000596802 LCE3EQ5T5B0 92 aa6.6□□□□□ -1.35
SIN3B-209ENST00000596802 SPRR2FQ96RM1 72 aa6.59□□□□□ -1.36
SIN3B-209ENST00000596802 KRTAP6-1Q3LI64 71 aa6.49□□□□□ -1.37
SIN3B-209ENST00000596802 LCE5AQ5TCM9 118 aa6.49□□□□□ -1.37
SIN3B-209ENST00000596802 MDN1Q9NU22 5596 aa6.47□□□□□ -1.37
SIN3B-209ENST00000596802 NEBP20929 6669 aa6.38□□□□□ -1.39
SIN3B-209ENST00000596802 LCE1AQ5T7P2 110 aa6.36□□□□□ -1.39
SIN3B-209ENST00000596802 SPRR2EP22531 72 aa6.35□□□□□ -1.39
SIN3B-209ENST00000596802 SPRR2BP35325 72 aa6.35□□□□□ -1.39
SIN3B-209ENST00000596802 SPRR2AP35326 72 aa6.35□□□□□ -1.39
SIN3B-209ENST00000596802 KRTAP6-2Q3LI66 62 aa6.26□□□□□ -1.41
SIN3B-209ENST00000596802 SPRR2DP22532 72 aa6.12□□□□□ -1.43
SIN3B-209ENST00000596802 KRTAP2-2Q9BYT5 123 aa6.09□□□□□ -1.44
SIN3B-209ENST00000596802 KRTAP20-1Q3LI63 56 aa5.96□□□□□ -1.46
SIN3B-209ENST00000596802 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
SIN3B-209ENST00000596802 OBSCNQ5VST9 7968 aa5.8□□□□□ -1.48
SIN3B-209ENST00000596802 MT3P25713 68 aa5.62□□□□□ -1.51
SIN3B-209ENST00000596802 LCE1EQ5T753 118 aa5.58□□□□□ -1.52
SIN3B-209ENST00000596802 KRTAP5-4Q6L8H1 288 aa5.46□□□□□ -1.54
SIN3B-209ENST00000596802 LCE4AQ5TA78 99 aa5.4□□□□□ -1.54
SIN3B-209ENST00000596802 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
SIN3B-209ENST00000596802 MT4P47944 62 aa5.35□□□□□ -1.55
SIN3B-209ENST00000596802 KRTAP4-6Q9BYQ5 205 aa5.28□□□□□ -1.56
SIN3B-209ENST00000596802 HMCN1Q96RW7 5635 aa5.25□□□□□ -1.57
SIN3B-209ENST00000596802 KRTAP20-2Q3LI61 65 aa5.12□□□□□ -1.59
SIN3B-209ENST00000596802 KRTAP4-11Q9BYQ6 195 aa4.99□□□□□ -1.61
SIN3B-209ENST00000596802 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
SIN3B-209ENST00000596802 MUC5ACP98088 5654 aa4.95□□□□□ -1.62
SIN3B-209ENST00000596802 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
SIN3B-209ENST00000596802 AHNAK2Q8IVF2 5795 aa4.84□□□□□ -1.63
SIN3B-209ENST00000596802 KRTAP5-10Q6L8G5 202 aa4.78□□□□□ -1.64
SIN3B-209ENST00000596802 GPR98Q8WXG9 6306 aa4.73□□□□□ -1.65
SIN3B-209ENST00000596802 KRTAP5-1Q6L8H4 278 aa4.59□□□□□ -1.67
SIN3B-209ENST00000596802 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
SIN3B-209ENST00000596802 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
SIN3B-209ENST00000596802 KRTAP5-7Q6L8G8 165 aa4.37□□□□□ -1.71
SIN3B-209ENST00000596802 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
SIN3B-209ENST00000596802 KRTAP21-1Q3LI58 79 aa4.28□□□□□ -1.72
SIN3B-209ENST00000596802 KRTAP4-2Q9BYR5 136 aa4.22□□□□□ -1.73
SIN3B-209ENST00000596802 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
SIN3B-209ENST00000596802 KRTAP21-2Q3LI59 83 aa4.15□□□□□ -1.75
SIN3B-209ENST00000596802 MUC19Q7Z5P9 8384 aa4.04□□□□□ -1.76
SIN3B-209ENST00000596802 KRTAP9-9Q9BYP9 154 aa4.01□□□□□ -1.77
SIN3B-209ENST00000596802 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
SIN3B-209ENST00000596802 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
SIN3B-209ENST00000596802 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
SIN3B-209ENST00000596802 AHNAKQ09666 5890 aaKnown RBP3.81□□□□□ -1.8
SIN3B-209ENST00000596802 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
SIN3B-209ENST00000596802 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
SIN3B-209ENST00000596802 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
SIN3B-209ENST00000596802 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms