RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 LCE5AQ5TCM9 118 aa7.77□□□□□ -1.17
PNKP-209ENST00000596726 KRTAP19-5Q3LI72 72 aa7.75□□□□□ -1.17
PNKP-209ENST00000596726 KRTAP19-3Q7Z4W3 81 aa7.75□□□□□ -1.17
PNKP-209ENST00000596726 PMAIP1Q13794 54 aa7.73□□□□□ -1.17
PNKP-209ENST00000596726 TNP1P09430 55 aa7.72□□□□□ -1.17
PNKP-209ENST00000596726 LCE3AQ5TA76 89 aa7.64□□□□□ -1.19
PNKP-209ENST00000596726 MT1GP13640 62 aa7.59□□□□□ -1.19
PNKP-209ENST00000596726 MT1LQ93083 61 aa7.52□□□□□ -1.21
PNKP-209ENST00000596726 DSTQ03001 7570 aaKnown RBP7.5□□□□□ -1.21
PNKP-209ENST00000596726 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
PNKP-209ENST00000596726 MT1MQ8N339 61 aa7.46□□□□□ -1.22
PNKP-209ENST00000596726 SVIPQ8NHG7 77 aa7.46□□□□□ -1.22
PNKP-209ENST00000596726 KTN1-AS1Q86SY8 53 aa7.44□□□□□ -1.22
PNKP-209ENST00000596726 ROMO1P60602 79 aa7.4□□□□□ -1.22
PNKP-209ENST00000596726 KRTAP25-1Q3LHN0 102 aa7.37□□□□□ -1.23
PNKP-209ENST00000596726 KRTAP12-3P60328 96 aa7.35□□□□□ -1.23
PNKP-209ENST00000596726 KRTAP4-3Q9BYR4 195 aa7.27□□□□□ -1.25
PNKP-209ENST00000596726 KRTAP4-9Q9BYQ8 210 aa7.2□□□□□ -1.26
PNKP-209ENST00000596726 KRTAP4-7Q9BYR0 210 aa7.15□□□□□ -1.26
PNKP-209ENST00000596726 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
PNKP-209ENST00000596726 LCE4AQ5TA78 99 aa7.12□□□□□ -1.27
PNKP-209ENST00000596726 LCE1DQ5T752 114 aa7.08□□□□□ -1.28
PNKP-209ENST00000596726 PRAC1Q96KF2 57 aa7.08□□□□□ -1.28
PNKP-209ENST00000596726 KRTAP5-4Q6L8H1 288 aa7.05□□□□□ -1.28
PNKP-209ENST00000596726 MT4P47944 62 aa6.99□□□□□ -1.29
PNKP-209ENST00000596726 KRTAP19-4Q3LI73 84 aa6.99□□□□□ -1.29
PNKP-209ENST00000596726 KRTAP15-1Q3LI76 137 aa6.93□□□□□ -1.3
PNKP-209ENST00000596726 HMCN1Q96RW7 5635 aa6.92□□□□□ -1.3
PNKP-209ENST00000596726 KRTAP5-5Q701N2 237 aaPredicted RBP6.85□□□□□ -1.31
PNKP-209ENST00000596726 KRTAP4-6Q9BYQ5 205 aa6.84□□□□□ -1.31
PNKP-209ENST00000596726 LCE3CQ5T5A8 94 aa6.79□□□□□ -1.32
PNKP-209ENST00000596726 GPR98Q8WXG9 6306 aa6.77□□□□□ -1.33
PNKP-209ENST00000596726 LOC100996750A0A140TA64 210 aa6.77□□□□□ -1.33
PNKP-209ENST00000596726 KRTAP20-2Q3LI61 65 aa6.62□□□□□ -1.35
PNKP-209ENST00000596726 AHNAK2Q8IVF2 5795 aa6.62□□□□□ -1.35
PNKP-209ENST00000596726 SPRR5A0A1B0GTR4 108 aa6.61□□□□□ -1.35
PNKP-209ENST00000596726 KRTAP12-4P60329 112 aa6.59□□□□□ -1.35
PNKP-209ENST00000596726 SYNE1Q8NF91 8797 aaKnown RBP6.53□□□□□ -1.36
PNKP-209ENST00000596726 KRTAP5-10Q6L8G5 202 aa6.51□□□□□ -1.37
PNKP-209ENST00000596726 KRTAP5-3Q6L8H2 238 aa6.44□□□□□ -1.38
PNKP-209ENST00000596726 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
PNKP-209ENST00000596726 MT1AP04731 61 aa6.41□□□□□ -1.38
PNKP-209ENST00000596726 KRTAP6-1Q3LI64 71 aa6.36□□□□□ -1.39
PNKP-209ENST00000596726 KRTAP5-7Q6L8G8 165 aa6.24□□□□□ -1.41
PNKP-209ENST00000596726 KRTAP5-2Q701N4 177 aa6.21□□□□□ -1.42
PNKP-209ENST00000596726 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
PNKP-209ENST00000596726 KRTAP6-2Q3LI66 62 aa6.03□□□□□ -1.44
PNKP-209ENST00000596726 KRTAP4-11Q9BYQ6 195 aa6□□□□□ -1.45
PNKP-209ENST00000596726 LUZP6Q538Z0 58 aa5.99□□□□□ -1.45
PNKP-209ENST00000596726 MT3P25713 68 aa5.84□□□□□ -1.47
PNKP-209ENST00000596726 KRTAP5-8O75690 187 aa5.81□□□□□ -1.48
PNKP-209ENST00000596726 NDUFAF8A1L188 74 aa5.72□□□□□ -1.49
PNKP-209ENST00000596726 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
PNKP-209ENST00000596726 KRTAP5-1Q6L8H4 278 aa5.53□□□□□ -1.52
PNKP-209ENST00000596726 KRTAP9-9Q9BYP9 154 aa5.45□□□□□ -1.54
PNKP-209ENST00000596726 MUC5BQ9HC84 5762 aaPredicted RBP5.4□□□□□ -1.54
PNKP-209ENST00000596726 MUC5ACP98088 5654 aa5.37□□□□□ -1.55
PNKP-209ENST00000596726 LCE1EQ5T753 118 aa5.35□□□□□ -1.55
PNKP-209ENST00000596726 AHNAKQ09666 5890 aaKnown RBP5.33□□□□□ -1.56
PNKP-209ENST00000596726 A0A0A0MQY5 61 aa5.2□□□□□ -1.58
PNKP-209ENST00000596726 H3BS24 57 aa5.06□□□□□ -1.6
PNKP-209ENST00000596726 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
PNKP-209ENST00000596726 LCE1BQ5T7P3 118 aa4.98□□□□□ -1.61
PNKP-209ENST00000596726 LCE1CQ5T751 118 aa4.96□□□□□ -1.62
PNKP-209ENST00000596726 LCE3DQ9BYE3 92 aa4.92□□□□□ -1.62
PNKP-209ENST00000596726 INE1O15225 51 aa4.89□□□□□ -1.63
PNKP-209ENST00000596726 LCE3EQ5T5B0 92 aa4.65□□□□□ -1.67
PNKP-209ENST00000596726 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.56□□□□□ -1.68
PNKP-209ENST00000596726 KRTAP5-11Q6L8G4 156 aa4.48□□□□□ -1.69
PNKP-209ENST00000596726 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
PNKP-209ENST00000596726 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
PNKP-209ENST00000596726 KRTAP21-2Q3LI59 83 aa4.2□□□□□ -1.74
PNKP-209ENST00000596726 PHGR1C9JFL3 82 aa3.86□□□□□ -1.79
PNKP-209ENST00000596726 PRM1P04553 51 aa3.8□□□□□ -1.8
PNKP-209ENST00000596726 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
PNKP-209ENST00000596726 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
PNKP-209ENST00000596726 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
PNKP-209ENST00000596726 MUC16Q8WXI7 14507 aa2.49□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 9.5 ms