RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 LCE3BQ5TA77 95 aa6.31□□□□□ -1.4
SHKBP1-212ENST00000596163 LCE5AQ5TCM9 118 aa6.3□□□□□ -1.4
SHKBP1-212ENST00000596163 SVIPQ8NHG7 77 aa6.26□□□□□ -1.41
SHKBP1-212ENST00000596163 KRTAP25-1Q3LHN0 102 aa6.25□□□□□ -1.41
SHKBP1-212ENST00000596163 MT1GP13640 62 aa6.24□□□□□ -1.41
SHKBP1-212ENST00000596163 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
SHKBP1-212ENST00000596163 MT1LQ93083 61 aa6.16□□□□□ -1.42
SHKBP1-212ENST00000596163 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
SHKBP1-212ENST00000596163 MT1MQ8N339 61 aa6.08□□□□□ -1.44
SHKBP1-212ENST00000596163 CDC42SE1Q9NRR8 79 aa6.08□□□□□ -1.44
SHKBP1-212ENST00000596163 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
SHKBP1-212ENST00000596163 DSTQ03001 7570 aaKnown RBP6.01□□□□□ -1.45
SHKBP1-212ENST00000596163 ROMO1P60602 79 aa5.99□□□□□ -1.45
SHKBP1-212ENST00000596163 KRTAP4-9Q9BYQ8 210 aa5.9□□□□□ -1.46
SHKBP1-212ENST00000596163 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
SHKBP1-212ENST00000596163 KRTAP4-3Q9BYR4 195 aa5.88□□□□□ -1.47
SHKBP1-212ENST00000596163 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
SHKBP1-212ENST00000596163 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
SHKBP1-212ENST00000596163 LCE4AQ5TA78 99 aa5.8□□□□□ -1.48
SHKBP1-212ENST00000596163 GPR98Q8WXG9 6306 aa5.76□□□□□ -1.49
SHKBP1-212ENST00000596163 LCE1DQ5T752 114 aa5.71□□□□□ -1.5
SHKBP1-212ENST00000596163 KRTAP5-4Q6L8H1 288 aa5.67□□□□□ -1.5
SHKBP1-212ENST00000596163 LCE3CQ5T5A8 94 aa5.66□□□□□ -1.5
SHKBP1-212ENST00000596163 MT4P47944 62 aa5.65□□□□□ -1.5
SHKBP1-212ENST00000596163 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
SHKBP1-212ENST00000596163 H3BS24 57 aa5.56□□□□□ -1.52
SHKBP1-212ENST00000596163 HMCN1Q96RW7 5635 aa5.55□□□□□ -1.52
SHKBP1-212ENST00000596163 KRTAP5-5Q701N2 237 aaPredicted RBP5.54□□□□□ -1.52
SHKBP1-212ENST00000596163 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
SHKBP1-212ENST00000596163 KRTAP4-6Q9BYQ5 205 aa5.5□□□□□ -1.53
SHKBP1-212ENST00000596163 KRTAP12-4P60329 112 aa5.43□□□□□ -1.54
SHKBP1-212ENST00000596163 KRTAP5-10Q6L8G5 202 aa5.41□□□□□ -1.54
SHKBP1-212ENST00000596163 SPRR5A0A1B0GTR4 108 aa5.39□□□□□ -1.55
SHKBP1-212ENST00000596163 AHNAK2Q8IVF2 5795 aa5.37□□□□□ -1.55
SHKBP1-212ENST00000596163 KRTAP20-2Q3LI61 65 aa5.34□□□□□ -1.55
SHKBP1-212ENST00000596163 PMAIP1Q13794 54 aa5.33□□□□□ -1.56
SHKBP1-212ENST00000596163 MT1AP04731 61 aa5.26□□□□□ -1.57
SHKBP1-212ENST00000596163 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
SHKBP1-212ENST00000596163 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
SHKBP1-212ENST00000596163 KRTAP5-3Q6L8H2 238 aa5.24□□□□□ -1.57
SHKBP1-212ENST00000596163 KRTAP5-7Q6L8G8 165 aa5.21□□□□□ -1.58
SHKBP1-212ENST00000596163 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
SHKBP1-212ENST00000596163 PRO0628Q9UI54 55 aa5.08□□□□□ -1.6
SHKBP1-212ENST00000596163 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
SHKBP1-212ENST00000596163 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
SHKBP1-212ENST00000596163 KRTAP5-2Q701N4 177 aa5□□□□□ -1.61
SHKBP1-212ENST00000596163 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
SHKBP1-212ENST00000596163 A0A0A0MQY5 61 aa4.85□□□□□ -1.63
SHKBP1-212ENST00000596163 MT3P25713 68 aa4.84□□□□□ -1.63
SHKBP1-212ENST00000596163 KRTAP4-11Q9BYQ6 195 aa4.84□□□□□ -1.63
SHKBP1-212ENST00000596163 KTN1-AS1Q86SY8 53 aa4.81□□□□□ -1.64
SHKBP1-212ENST00000596163 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
SHKBP1-212ENST00000596163 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
SHKBP1-212ENST00000596163 MUC5ACP98088 5654 aa4.49□□□□□ -1.69
SHKBP1-212ENST00000596163 MUC5BQ9HC84 5762 aaPredicted RBP4.45□□□□□ -1.7
SHKBP1-212ENST00000596163 KRTAP5-1Q6L8H4 278 aa4.44□□□□□ -1.7
SHKBP1-212ENST00000596163 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
SHKBP1-212ENST00000596163 AHNAKQ09666 5890 aaKnown RBP4.42□□□□□ -1.7
SHKBP1-212ENST00000596163 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
SHKBP1-212ENST00000596163 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
SHKBP1-212ENST00000596163 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
SHKBP1-212ENST00000596163 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
SHKBP1-212ENST00000596163 LCE1CQ5T751 118 aa4.06□□□□□ -1.76
SHKBP1-212ENST00000596163 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
SHKBP1-212ENST00000596163 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
SHKBP1-212ENST00000596163 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.79
SHKBP1-212ENST00000596163 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
SHKBP1-212ENST00000596163 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
SHKBP1-212ENST00000596163 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
SHKBP1-212ENST00000596163 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
SHKBP1-212ENST00000596163 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
SHKBP1-212ENST00000596163 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
SHKBP1-212ENST00000596163 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
SHKBP1-212ENST00000596163 PRM1P04553 51 aa3.03□□□□□ -1.92
SHKBP1-212ENST00000596163 INE1O15225 51 aa2.96□□□□□ -1.94
SHKBP1-212ENST00000596163 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
SHKBP1-212ENST00000596163 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
SHKBP1-212ENST00000596163 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 89.1 ms