RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 KRTAP4-3Q9BYR4 195 aa5.64□□□□□ -1.51
ARHGEF1-213ENST00000595897 FSIP2Q5CZC0 6907 aa5.64□□□□□ -1.51
ARHGEF1-213ENST00000595897 MT1GP13640 62 aa5.62□□□□□ -1.51
ARHGEF1-213ENST00000595897 CRCT1Q9UGL9 99 aa5.58□□□□□ -1.52
ARHGEF1-213ENST00000595897 KRTAP19-6Q3LI70 58 aa5.54□□□□□ -1.52
ARHGEF1-213ENST00000595897 MUC12Q9UKN1 5478 aa5.5□□□□□ -1.53
ARHGEF1-213ENST00000595897 FCGBPQ9Y6R7 5405 aaPredicted RBP5.5□□□□□ -1.53
ARHGEF1-213ENST00000595897 MT1MQ8N339 61 aa5.49□□□□□ -1.53
ARHGEF1-213ENST00000595897 LCE2DQ5TA82 110 aaPredicted RBP5.49□□□□□ -1.53
ARHGEF1-213ENST00000595897 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
ARHGEF1-213ENST00000595897 KRTAP19-3Q7Z4W3 81 aa5.47□□□□□ -1.53
ARHGEF1-213ENST00000595897 DSTQ03001 7570 aaKnown RBP5.39□□□□□ -1.55
ARHGEF1-213ENST00000595897 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.55
ARHGEF1-213ENST00000595897 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
ARHGEF1-213ENST00000595897 LCE3BQ5TA77 95 aa5.28□□□□□ -1.56
ARHGEF1-213ENST00000595897 SPRR2FQ96RM1 72 aa5.23□□□□□ -1.57
ARHGEF1-213ENST00000595897 LCE5AQ5TCM9 118 aa5.22□□□□□ -1.57
ARHGEF1-213ENST00000595897 KRTAP4-9Q9BYQ8 210 aa5.19□□□□□ -1.58
ARHGEF1-213ENST00000595897 MT1AP04731 61 aa5.06□□□□□ -1.6
ARHGEF1-213ENST00000595897 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
ARHGEF1-213ENST00000595897 LCE3DQ9BYE3 92 aa5.02□□□□□ -1.61
ARHGEF1-213ENST00000595897 KRTAP9-2Q9BYQ4 174 aa4.99□□□□□ -1.61
ARHGEF1-213ENST00000595897 MACF1Q9UPN3 7388 aaKnown RBP4.98□□□□□ -1.61
ARHGEF1-213ENST00000595897 LCE3EQ5T5B0 92 aa4.96□□□□□ -1.61
ARHGEF1-213ENST00000595897 SYNE2Q8WXH0 6885 aaKnown RBP4.91□□□□□ -1.62
ARHGEF1-213ENST00000595897 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
ARHGEF1-213ENST00000595897 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
ARHGEF1-213ENST00000595897 PRM1P04553 51 aa4.86□□□□□ -1.63
ARHGEF1-213ENST00000595897 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.63
ARHGEF1-213ENST00000595897 LCE1AQ5T7P2 110 aa4.76□□□□□ -1.65
ARHGEF1-213ENST00000595897 SPRR2EP22531 72 aa4.66□□□□□ -1.66
ARHGEF1-213ENST00000595897 SPRR2BP35325 72 aa4.66□□□□□ -1.66
ARHGEF1-213ENST00000595897 SPRR2AP35326 72 aa4.66□□□□□ -1.66
ARHGEF1-213ENST00000595897 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
ARHGEF1-213ENST00000595897 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
ARHGEF1-213ENST00000595897 KRTAP5-9P26371 169 aa4.62□□□□□ -1.67
ARHGEF1-213ENST00000595897 MT3P25713 68 aa4.47□□□□□ -1.69
ARHGEF1-213ENST00000595897 SPRR2DP22532 72 aa4.44□□□□□ -1.7
ARHGEF1-213ENST00000595897 KRTAP6-3Q3LI67 103 aa4.4□□□□□ -1.7
ARHGEF1-213ENST00000595897 KRTAP9-6A0A140TA67 174 aa4.34□□□□□ -1.71
ARHGEF1-213ENST00000595897 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
ARHGEF1-213ENST00000595897 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
ARHGEF1-213ENST00000595897 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
ARHGEF1-213ENST00000595897 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
ARHGEF1-213ENST00000595897 KRTAP9-1A8MXZ3 250 aaPredicted RBP4□□□□□ -1.77
ARHGEF1-213ENST00000595897 KRTAP4-6Q9BYQ5 205 aa3.99□□□□□ -1.77
ARHGEF1-213ENST00000595897 MT4P47944 62 aa3.98□□□□□ -1.77
ARHGEF1-213ENST00000595897 MUC19Q7Z5P9 8384 aa3.93□□□□□ -1.78
ARHGEF1-213ENST00000595897 KRTAP20-2Q3LI61 65 aa3.86□□□□□ -1.79
ARHGEF1-213ENST00000595897 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
ARHGEF1-213ENST00000595897 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
ARHGEF1-213ENST00000595897 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
ARHGEF1-213ENST00000595897 NEBP20929 6669 aa3.75□□□□□ -1.81
ARHGEF1-213ENST00000595897 HMCN1Q96RW7 5635 aa3.71□□□□□ -1.81
ARHGEF1-213ENST00000595897 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
ARHGEF1-213ENST00000595897 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
ARHGEF1-213ENST00000595897 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.82
ARHGEF1-213ENST00000595897 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
ARHGEF1-213ENST00000595897 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.84
ARHGEF1-213ENST00000595897 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
ARHGEF1-213ENST00000595897 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
ARHGEF1-213ENST00000595897 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
ARHGEF1-213ENST00000595897 LCE1CQ5T751 118 aa3.36□□□□□ -1.87
ARHGEF1-213ENST00000595897 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.89
ARHGEF1-213ENST00000595897 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
ARHGEF1-213ENST00000595897 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
ARHGEF1-213ENST00000595897 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
ARHGEF1-213ENST00000595897 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
ARHGEF1-213ENST00000595897 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
ARHGEF1-213ENST00000595897 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
ARHGEF1-213ENST00000595897 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
ARHGEF1-213ENST00000595897 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
ARHGEF1-213ENST00000595897 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
ARHGEF1-213ENST00000595897 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
ARHGEF1-213ENST00000595897 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
ARHGEF1-213ENST00000595897 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.02
ARHGEF1-213ENST00000595897 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
ARHGEF1-213ENST00000595897 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms