RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
XRCC1-205ENST00000595789 C10orf95Q9H7T3 257 aa5.12□□□□□ -1.59
XRCC1-205ENST00000595789 CCDC179H3BU77 68 aa5.08□□□□□ -1.6
XRCC1-205ENST00000595789 H7BZZ5 65 aa5.08□□□□□ -1.6
XRCC1-205ENST00000595789 A8MU10 97 aa5.02□□□□□ -1.61
XRCC1-205ENST00000595789 TNP1P09430 55 aa5.02□□□□□ -1.61
XRCC1-205ENST00000595789 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
XRCC1-205ENST00000595789 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
XRCC1-205ENST00000595789 KRTAP5-7Q6L8G8 165 aa5.01□□□□□ -1.61
XRCC1-205ENST00000595789 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
XRCC1-205ENST00000595789 RPS28P62857 69 aaKnown RBP4.94□□□□□ -1.62
XRCC1-205ENST00000595789 KRTAP20-2Q3LI61 65 aa4.94□□□□□ -1.62
XRCC1-205ENST00000595789 A0A1B0GU69 56 aa4.93□□□□□ -1.62
XRCC1-205ENST00000595789 KRTAP5-5Q701N2 237 aaPredicted RBP4.92□□□□□ -1.62
XRCC1-205ENST00000595789 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
XRCC1-205ENST00000595789 SPRR5A0A1B0GTR4 108 aa4.89□□□□□ -1.63
XRCC1-205ENST00000595789 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
XRCC1-205ENST00000595789 TMEM258P61165 79 aa4.86□□□□□ -1.63
XRCC1-205ENST00000595789 LOC100996750A0A140TA64 210 aa4.84□□□□□ -1.63
XRCC1-205ENST00000595789 ATP5EP56381 51 aaPredicted RBP4.83□□□□□ -1.64
XRCC1-205ENST00000595789 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
XRCC1-205ENST00000595789 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
XRCC1-205ENST00000595789 PRO0628Q9UI54 55 aa4.8□□□□□ -1.64
XRCC1-205ENST00000595789 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
XRCC1-205ENST00000595789 V9GYY9 64 aa4.74□□□□□ -1.65
XRCC1-205ENST00000595789 PRR15LQ9BU68 103 aa4.68□□□□□ -1.66
XRCC1-205ENST00000595789 LINC01558Q9Y6Z2 57 aa4.67□□□□□ -1.66
XRCC1-205ENST00000595789 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
XRCC1-205ENST00000595789 BRK1Q8WUW1 75 aa4.57□□□□□ -1.68
XRCC1-205ENST00000595789 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
XRCC1-205ENST00000595789 UQCR11O14957 56 aa4.55□□□□□ -1.68
XRCC1-205ENST00000595789 KRTAP5-2Q701N4 177 aa4.55□□□□□ -1.68
XRCC1-205ENST00000595789 KRTAP4-12Q9BQ66 201 aa4.55□□□□□ -1.68
XRCC1-205ENST00000595789 Q1T7F1 81 aa4.54□□□□□ -1.68
XRCC1-205ENST00000595789 PMAIP1Q13794 54 aa4.53□□□□□ -1.68
XRCC1-205ENST00000595789 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
XRCC1-205ENST00000595789 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
XRCC1-205ENST00000595789 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
XRCC1-205ENST00000595789 PSPHP1O15172 72 aa4.47□□□□□ -1.69
XRCC1-205ENST00000595789 MT1AP04731 61 aa4.47□□□□□ -1.69
XRCC1-205ENST00000595789 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
XRCC1-205ENST00000595789 MIR22HGQ0VDD5 57 aa4.42□□□□□ -1.7
XRCC1-205ENST00000595789 MUC5BQ9HC84 5762 aaPredicted RBP4.39□□□□□ -1.71
XRCC1-205ENST00000595789 KTN1-AS1Q86SY8 53 aa4.37□□□□□ -1.71
XRCC1-205ENST00000595789 AHNAKQ09666 5890 aaKnown RBP4.37□□□□□ -1.71
XRCC1-205ENST00000595789 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
XRCC1-205ENST00000595789 KRTAP9-4Q9BYQ2 154 aa4.36□□□□□ -1.71
XRCC1-205ENST00000595789 K7ERS5 55 aa4.34□□□□□ -1.71
XRCC1-205ENST00000595789 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
XRCC1-205ENST00000595789 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
XRCC1-205ENST00000595789 KRTAP9-6A8MVA2 160 aa4.31□□□□□ -1.72
XRCC1-205ENST00000595789 A6NED7 52 aa4.29□□□□□ -1.72
XRCC1-205ENST00000595789 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
XRCC1-205ENST00000595789 CDC42SE1Q9NRR8 79 aa4.2□□□□□ -1.74
XRCC1-205ENST00000595789 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
XRCC1-205ENST00000595789 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
XRCC1-205ENST00000595789 MT3P25713 68 aa4.09□□□□□ -1.75
XRCC1-205ENST00000595789 ROMO1P60602 79 aa4.05□□□□□ -1.76
XRCC1-205ENST00000595789 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
XRCC1-205ENST00000595789 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
XRCC1-205ENST00000595789 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
XRCC1-205ENST00000595789 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
XRCC1-205ENST00000595789 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
XRCC1-205ENST00000595789 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
XRCC1-205ENST00000595789 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
XRCC1-205ENST00000595789 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
XRCC1-205ENST00000595789 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
XRCC1-205ENST00000595789 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
XRCC1-205ENST00000595789 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
XRCC1-205ENST00000595789 PHGR1C9JFL3 82 aa3□□□□□ -1.93
XRCC1-205ENST00000595789 INE1O15225 51 aa2.97□□□□□ -1.93
XRCC1-205ENST00000595789 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
XRCC1-205ENST00000595789 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
XRCC1-205ENST00000595789 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
XRCC1-205ENST00000595789 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
XRCC1-205ENST00000595789 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
XRCC1-205ENST00000595789 PRM1P04553 51 aa2.08□□□□□ -2.08
XRCC1-205ENST00000595789 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 88 ms