RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 PP632Q6XCG6 107 aa5.72□□□□□ -1.49
IRF3-210ENST00000595240 MT1LQ93083 61 aa5.71□□□□□ -1.5
IRF3-210ENST00000595240 MT1MQ8N339 61 aa5.69□□□□□ -1.5
IRF3-210ENST00000595240 GPR98Q8WXG9 6306 aa5.68□□□□□ -1.5
IRF3-210ENST00000595240 PSPHP1O15172 72 aa5.68□□□□□ -1.5
IRF3-210ENST00000595240 MIR22HGQ0VDD5 57 aa5.66□□□□□ -1.5
IRF3-210ENST00000595240 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.5
IRF3-210ENST00000595240 KRTAP4-3Q9BYR4 195 aa5.55□□□□□ -1.52
IRF3-210ENST00000595240 LCE1DQ5T752 114 aa5.53□□□□□ -1.52
IRF3-210ENST00000595240 LCE4AQ5TA78 99 aa5.52□□□□□ -1.53
IRF3-210ENST00000595240 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
IRF3-210ENST00000595240 A6NED7 52 aa5.5□□□□□ -1.53
IRF3-210ENST00000595240 HMCN1Q96RW7 5635 aa5.5□□□□□ -1.53
IRF3-210ENST00000595240 K7ERS5 55 aa5.49□□□□□ -1.53
IRF3-210ENST00000595240 MT4P47944 62 aa5.45□□□□□ -1.54
IRF3-210ENST00000595240 KRTAP5-4Q6L8H1 288 aa5.45□□□□□ -1.54
IRF3-210ENST00000595240 KRTAP25-1Q3LHN0 102 aa5.42□□□□□ -1.54
IRF3-210ENST00000595240 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
IRF3-210ENST00000595240 CDC42SE1Q9NRR8 79 aa5.34□□□□□ -1.55
IRF3-210ENST00000595240 AHNAK2Q8IVF2 5795 aa5.34□□□□□ -1.55
IRF3-210ENST00000595240 KRTAP4-6Q9BYQ5 205 aa5.32□□□□□ -1.56
IRF3-210ENST00000595240 KRTAP5-5Q701N2 237 aaPredicted RBP5.24□□□□□ -1.57
IRF3-210ENST00000595240 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
IRF3-210ENST00000595240 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
IRF3-210ENST00000595240 ROMO1P60602 79 aa5.19□□□□□ -1.58
IRF3-210ENST00000595240 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
IRF3-210ENST00000595240 KRTAP5-10Q6L8G5 202 aa5.15□□□□□ -1.59
IRF3-210ENST00000595240 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
IRF3-210ENST00000595240 KRTAP20-2Q3LI61 65 aa5.12□□□□□ -1.59
IRF3-210ENST00000595240 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
IRF3-210ENST00000595240 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
IRF3-210ENST00000595240 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
IRF3-210ENST00000595240 KRTAP5-3Q6L8H2 238 aa5.03□□□□□ -1.6
IRF3-210ENST00000595240 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
IRF3-210ENST00000595240 BRK1Q8WUW1 75 aa5□□□□□ -1.61
IRF3-210ENST00000595240 KRTAP5-7Q6L8G8 165 aa4.96□□□□□ -1.62
IRF3-210ENST00000595240 MT1AP04731 61 aa4.86□□□□□ -1.63
IRF3-210ENST00000595240 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
IRF3-210ENST00000595240 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
IRF3-210ENST00000595240 KRTAP5-2Q701N4 177 aa4.78□□□□□ -1.64
IRF3-210ENST00000595240 PMAIP1Q13794 54 aa4.73□□□□□ -1.65
IRF3-210ENST00000595240 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
IRF3-210ENST00000595240 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
IRF3-210ENST00000595240 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
IRF3-210ENST00000595240 PRO0628Q9UI54 55 aa4.61□□□□□ -1.67
IRF3-210ENST00000595240 KRTAP5-8O75690 187 aa4.53□□□□□ -1.68
IRF3-210ENST00000595240 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
IRF3-210ENST00000595240 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
IRF3-210ENST00000595240 MT3P25713 68 aa4.44□□□□□ -1.7
IRF3-210ENST00000595240 AHNAKQ09666 5890 aaKnown RBP4.43□□□□□ -1.7
IRF3-210ENST00000595240 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
IRF3-210ENST00000595240 MUC5BQ9HC84 5762 aaPredicted RBP4.37□□□□□ -1.71
IRF3-210ENST00000595240 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
IRF3-210ENST00000595240 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
IRF3-210ENST00000595240 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
IRF3-210ENST00000595240 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
IRF3-210ENST00000595240 SVIPQ8NHG7 77 aa4.07□□□□□ -1.76
IRF3-210ENST00000595240 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
IRF3-210ENST00000595240 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
IRF3-210ENST00000595240 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
IRF3-210ENST00000595240 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
IRF3-210ENST00000595240 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
IRF3-210ENST00000595240 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
IRF3-210ENST00000595240 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
IRF3-210ENST00000595240 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
IRF3-210ENST00000595240 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
IRF3-210ENST00000595240 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
IRF3-210ENST00000595240 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
IRF3-210ENST00000595240 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
IRF3-210ENST00000595240 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
IRF3-210ENST00000595240 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
IRF3-210ENST00000595240 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
IRF3-210ENST00000595240 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
IRF3-210ENST00000595240 INE1O15225 51 aa2.67□□□□□ -1.98
IRF3-210ENST00000595240 PRM1P04553 51 aa2.65□□□□□ -1.99
IRF3-210ENST00000595240 H3BS24 57 aa2.45□□□□□ -2.02
IRF3-210ENST00000595240 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
IRF3-210ENST00000595240 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 105.7 ms