RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 KRTAP4-9Q9BYQ8 210 aa6.07□□□□□ -1.44
FOXA3-202ENST00000594297 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
FOXA3-202ENST00000594297 KRTAP10-12P60413 245 aa6.03□□□□□ -1.44
FOXA3-202ENST00000594297 KRTAP25-1Q3LHN0 102 aa6.03□□□□□ -1.44
FOXA3-202ENST00000594297 PMAIP1Q13794 54 aa6.02□□□□□ -1.45
FOXA3-202ENST00000594297 LCE1DQ5T752 114 aa5.87□□□□□ -1.47
FOXA3-202ENST00000594297 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
FOXA3-202ENST00000594297 LCE5AQ5TCM9 118 aa5.82□□□□□ -1.48
FOXA3-202ENST00000594297 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
FOXA3-202ENST00000594297 LCE3AQ5TA76 89 aa5.77□□□□□ -1.49
FOXA3-202ENST00000594297 HMCN1Q96RW7 5635 aa5.74□□□□□ -1.49
FOXA3-202ENST00000594297 AHNAK2Q8IVF2 5795 aa5.74□□□□□ -1.49
FOXA3-202ENST00000594297 MT4P47944 62 aa5.73□□□□□ -1.49
FOXA3-202ENST00000594297 KRTAP19-3Q7Z4W3 81 aa5.73□□□□□ -1.49
FOXA3-202ENST00000594297 KRTAP5-10Q6L8G5 202 aa5.72□□□□□ -1.49
FOXA3-202ENST00000594297 KRTAP19-7Q3SYF9 63 aa5.7□□□□□ -1.5
FOXA3-202ENST00000594297 MT1EP04732 61 aa5.69□□□□□ -1.5
FOXA3-202ENST00000594297 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
FOXA3-202ENST00000594297 KTN1-AS1Q86SY8 53 aa5.65□□□□□ -1.5
FOXA3-202ENST00000594297 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
FOXA3-202ENST00000594297 KRTAP12-3P60328 96 aa5.6□□□□□ -1.51
FOXA3-202ENST00000594297 KRTAP5-7Q6L8G8 165 aa5.55□□□□□ -1.52
FOXA3-202ENST00000594297 PRAC1Q96KF2 57 aa5.55□□□□□ -1.52
FOXA3-202ENST00000594297 KRTAP4-6Q9BYQ5 205 aa5.51□□□□□ -1.53
FOXA3-202ENST00000594297 MT1GP13640 62 aa5.5□□□□□ -1.53
FOXA3-202ENST00000594297 KRTAP5-4Q6L8H1 288 aa5.5□□□□□ -1.53
FOXA3-202ENST00000594297 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
FOXA3-202ENST00000594297 MT1MQ8N339 61 aa5.45□□□□□ -1.54
FOXA3-202ENST00000594297 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
FOXA3-202ENST00000594297 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
FOXA3-202ENST00000594297 SVIPQ8NHG7 77 aa5.39□□□□□ -1.55
FOXA3-202ENST00000594297 MT1LQ93083 61 aa5.37□□□□□ -1.55
FOXA3-202ENST00000594297 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
FOXA3-202ENST00000594297 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
FOXA3-202ENST00000594297 KRTAP20-2Q3LI61 65 aa5.24□□□□□ -1.57
FOXA3-202ENST00000594297 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
FOXA3-202ENST00000594297 KRTAP4-7Q9BYR0 210 aa5.09□□□□□ -1.59
FOXA3-202ENST00000594297 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
FOXA3-202ENST00000594297 KRTAP12-4P60329 112 aa5□□□□□ -1.61
FOXA3-202ENST00000594297 SYNE1Q8NF91 8797 aaKnown RBP4.97□□□□□ -1.61
FOXA3-202ENST00000594297 KRTAP4-11Q9BYQ6 195 aa4.89□□□□□ -1.63
FOXA3-202ENST00000594297 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
FOXA3-202ENST00000594297 LOC100996750A0A140TA64 210 aa4.84□□□□□ -1.63
FOXA3-202ENST00000594297 MUC5ACP98088 5654 aa4.84□□□□□ -1.64
FOXA3-202ENST00000594297 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
FOXA3-202ENST00000594297 KRTAP5-8O75690 187 aa4.78□□□□□ -1.64
FOXA3-202ENST00000594297 LUZP6Q538Z0 58 aa4.78□□□□□ -1.64
FOXA3-202ENST00000594297 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
FOXA3-202ENST00000594297 KRTAP5-2Q701N4 177 aa4.73□□□□□ -1.65
FOXA3-202ENST00000594297 MT1AP04731 61 aa4.61□□□□□ -1.67
FOXA3-202ENST00000594297 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
FOXA3-202ENST00000594297 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
FOXA3-202ENST00000594297 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
FOXA3-202ENST00000594297 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
FOXA3-202ENST00000594297 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
FOXA3-202ENST00000594297 KRTAP5-1Q6L8H4 278 aa4.34□□□□□ -1.71
FOXA3-202ENST00000594297 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
FOXA3-202ENST00000594297 MT3P25713 68 aa4.24□□□□□ -1.73
FOXA3-202ENST00000594297 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
FOXA3-202ENST00000594297 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
FOXA3-202ENST00000594297 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
FOXA3-202ENST00000594297 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
FOXA3-202ENST00000594297 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
FOXA3-202ENST00000594297 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
FOXA3-202ENST00000594297 INE1O15225 51 aa3.65□□□□□ -1.83
FOXA3-202ENST00000594297 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.83
FOXA3-202ENST00000594297 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
FOXA3-202ENST00000594297 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
FOXA3-202ENST00000594297 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
FOXA3-202ENST00000594297 PHGR1C9JFL3 82 aa3.36□□□□□ -1.87
FOXA3-202ENST00000594297 H3BS24 57 aa3.28□□□□□ -1.88
FOXA3-202ENST00000594297 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
FOXA3-202ENST00000594297 PRM1P04553 51 aa3.1□□□□□ -1.91
FOXA3-202ENST00000594297 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
FOXA3-202ENST00000594297 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
FOXA3-202ENST00000594297 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
FOXA3-202ENST00000594297 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
FOXA3-202ENST00000594297 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 61.6 ms