RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 MT1GP13640 62 aa6.65□□□□□ -1.34
SHKBP1-202ENST00000593764 UQCR11O14957 56 aa6.63□□□□□ -1.35
SHKBP1-202ENST00000593764 MT1LQ93083 61 aa6.59□□□□□ -1.35
SHKBP1-202ENST00000593764 PP632Q6XCG6 107 aa6.55□□□□□ -1.36
SHKBP1-202ENST00000593764 MT1MQ8N339 61 aa6.55□□□□□ -1.36
SHKBP1-202ENST00000593764 MIR22HGQ0VDD5 57 aa6.48□□□□□ -1.37
SHKBP1-202ENST00000593764 KRTAP4-9Q9BYQ8 210 aa6.44□□□□□ -1.38
SHKBP1-202ENST00000593764 KRTAP4-3Q9BYR4 195 aa6.42□□□□□ -1.38
SHKBP1-202ENST00000593764 PSPHP1O15172 72 aa6.4□□□□□ -1.38
SHKBP1-202ENST00000593764 Q1T7F1 81 aa6.4□□□□□ -1.38
SHKBP1-202ENST00000593764 V9GYY9 64 aa6.4□□□□□ -1.38
SHKBP1-202ENST00000593764 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
SHKBP1-202ENST00000593764 KRTAP25-1Q3LHN0 102 aa6.33□□□□□ -1.4
SHKBP1-202ENST00000593764 K7ERS5 55 aa6.3□□□□□ -1.4
SHKBP1-202ENST00000593764 LCE1DQ5T752 114 aa6.3□□□□□ -1.4
SHKBP1-202ENST00000593764 KRTAP4-7Q9BYR0 210 aa6.3□□□□□ -1.4
SHKBP1-202ENST00000593764 LCE4AQ5TA78 99 aa6.29□□□□□ -1.4
SHKBP1-202ENST00000593764 KRTAP15-1Q3LI76 137 aa6.23□□□□□ -1.41
SHKBP1-202ENST00000593764 KRTAP5-4Q6L8H1 288 aa6.23□□□□□ -1.41
SHKBP1-202ENST00000593764 MT4P47944 62 aa6.22□□□□□ -1.41
SHKBP1-202ENST00000593764 HMCN1Q96RW7 5635 aa6.21□□□□□ -1.42
SHKBP1-202ENST00000593764 GPR98Q8WXG9 6306 aa6.16□□□□□ -1.42
SHKBP1-202ENST00000593764 A6NED7 52 aa6.16□□□□□ -1.42
SHKBP1-202ENST00000593764 RPS28P62857 69 aaKnown RBP6.1□□□□□ -1.43
SHKBP1-202ENST00000593764 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.43
SHKBP1-202ENST00000593764 KRTAP5-5Q701N2 237 aaPredicted RBP6.02□□□□□ -1.45
SHKBP1-202ENST00000593764 CDC42SE1Q9NRR8 79 aa6□□□□□ -1.45
SHKBP1-202ENST00000593764 AHNAK2Q8IVF2 5795 aa5.98□□□□□ -1.45
SHKBP1-202ENST00000593764 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
SHKBP1-202ENST00000593764 PRAC1Q96KF2 57 aa5.98□□□□□ -1.45
SHKBP1-202ENST00000593764 ROMO1P60602 79 aa5.93□□□□□ -1.46
SHKBP1-202ENST00000593764 LCE3CQ5T5A8 94 aa5.9□□□□□ -1.46
SHKBP1-202ENST00000593764 KRTAP4-12Q9BQ66 201 aa5.9□□□□□ -1.46
SHKBP1-202ENST00000593764 KRTAP20-2Q3LI61 65 aa5.85□□□□□ -1.47
SHKBP1-202ENST00000593764 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
SHKBP1-202ENST00000593764 SPRR5A0A1B0GTR4 108 aa5.83□□□□□ -1.48
SHKBP1-202ENST00000593764 KRTAP5-10Q6L8G5 202 aa5.82□□□□□ -1.48
SHKBP1-202ENST00000593764 KRTAP12-4P60329 112 aa5.8□□□□□ -1.48
SHKBP1-202ENST00000593764 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
SHKBP1-202ENST00000593764 KRTAP9-9Q9BYP9 154 aa5.72□□□□□ -1.49
SHKBP1-202ENST00000593764 KRTAP5-3Q6L8H2 238 aa5.7□□□□□ -1.5
SHKBP1-202ENST00000593764 KRTAP9-6A8MVA2 160 aa5.62□□□□□ -1.51
SHKBP1-202ENST00000593764 MT1AP04731 61 aa5.6□□□□□ -1.51
SHKBP1-202ENST00000593764 KRTAP6-1Q3LI64 71 aa5.58□□□□□ -1.52
SHKBP1-202ENST00000593764 KRTAP5-7Q6L8G8 165 aa5.58□□□□□ -1.52
SHKBP1-202ENST00000593764 NDUFAF8A1L188 74 aa5.52□□□□□ -1.53
SHKBP1-202ENST00000593764 KRTAP5-2Q701N4 177 aa5.47□□□□□ -1.53
SHKBP1-202ENST00000593764 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
SHKBP1-202ENST00000593764 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
SHKBP1-202ENST00000593764 BRK1Q8WUW1 75 aa5.31□□□□□ -1.56
SHKBP1-202ENST00000593764 KRTAP5-8O75690 187 aa5.16□□□□□ -1.58
SHKBP1-202ENST00000593764 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.59
SHKBP1-202ENST00000593764 MT3P25713 68 aa5.11□□□□□ -1.59
SHKBP1-202ENST00000593764 PRO0628Q9UI54 55 aa5.07□□□□□ -1.6
SHKBP1-202ENST00000593764 PMAIP1Q13794 54 aa5□□□□□ -1.61
SHKBP1-202ENST00000593764 KRTAP5-1Q6L8H4 278 aa4.9□□□□□ -1.63
SHKBP1-202ENST00000593764 MUC5BQ9HC84 5762 aaPredicted RBP4.9□□□□□ -1.63
SHKBP1-202ENST00000593764 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
SHKBP1-202ENST00000593764 MUC5ACP98088 5654 aa4.86□□□□□ -1.63
SHKBP1-202ENST00000593764 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
SHKBP1-202ENST00000593764 KRTAP4-2Q9BYR5 136 aa4.68□□□□□ -1.66
SHKBP1-202ENST00000593764 KTN1-AS1Q86SY8 53 aa4.61□□□□□ -1.67
SHKBP1-202ENST00000593764 LUZP6Q538Z0 58 aa4.57□□□□□ -1.68
SHKBP1-202ENST00000593764 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
SHKBP1-202ENST00000593764 LCE1BQ5T7P3 118 aa4.39□□□□□ -1.71
SHKBP1-202ENST00000593764 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
SHKBP1-202ENST00000593764 LCE3DQ9BYE3 92 aa4.26□□□□□ -1.73
SHKBP1-202ENST00000593764 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
SHKBP1-202ENST00000593764 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
SHKBP1-202ENST00000593764 KRTAP5-11Q6L8G4 156 aa3.94□□□□□ -1.78
SHKBP1-202ENST00000593764 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
SHKBP1-202ENST00000593764 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
SHKBP1-202ENST00000593764 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
SHKBP1-202ENST00000593764 INE1O15225 51 aa3.21□□□□□ -1.9
SHKBP1-202ENST00000593764 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
SHKBP1-202ENST00000593764 PRM1P04553 51 aa3.04□□□□□ -1.92
SHKBP1-202ENST00000593764 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
SHKBP1-202ENST00000593764 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 114 ms