RNA–Protein interactions for RNA: ENST00000593157.5

TRMT1-222, Transcript of tRNA methyltransferase 1, human

TSL 2

Gene TRMT1, Length 2,127 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRMT1-222	ENST00000593157	USH2A	O75445	5202 aa		6.62	□□□□□ -1.35
TRMT1-222	ENST00000593157	CRCT1	Q9UGL9	99 aa		6.51	□□□□□ -1.37
TRMT1-222	ENST00000593157	KRTAP9-6	A0A140TA67	174 aa		6.49	□□□□□ -1.37
TRMT1-222	ENST00000593157	SSPO	A2VEC9	5147 aa		6.45	□□□□□ -1.38
TRMT1-222	ENST00000593157	LOC100996750	A0A140TA64	210 aa		6.32	□□□□□ -1.4
TRMT1-222	ENST00000593157	KRTAP12-4	P60329	112 aa		6.29	□□□□□ -1.4
TRMT1-222	ENST00000593157	MT1G	P13640	62 aa		6.28	□□□□□ -1.4
TRMT1-222	ENST00000593157	KRTAP19-6	Q3LI70	58 aa		6.26	□□□□□ -1.41
TRMT1-222	ENST00000593157	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	6.26	□□□□□ -1.41
TRMT1-222	ENST00000593157	MT1M	Q8N339	61 aa		6.25	□□□□□ -1.41
TRMT1-222	ENST00000593157	KRTAP4-3	Q9BYR4	195 aa		6.25	□□□□□ -1.41
TRMT1-222	ENST00000593157	KRTAP19-3	Q7Z4W3	81 aa		6.2	□□□□□ -1.42
TRMT1-222	ENST00000593157	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	6.04	□□□□□ -1.44
TRMT1-222	ENST00000593157	MACF1	Q9UPN3	7388 aa	Known RBP	6	□□□□□ -1.45
TRMT1-222	ENST00000593157	MT1A	P04731	61 aa		5.98	□□□□□ -1.45
TRMT1-222	ENST00000593157	SYNE2	Q8WXH0	6885 aa	Known RBP	5.96	□□□□□ -1.46
TRMT1-222	ENST00000593157	LCE5A	Q5TCM9	118 aa		5.95	□□□□□ -1.46
TRMT1-222	ENST00000593157	KRTAP9-7	A8MTY7	169 aa		5.88	□□□□□ -1.47
TRMT1-222	ENST00000593157	LCE3B	Q5TA77	95 aa		5.88	□□□□□ -1.47
TRMT1-222	ENST00000593157	MUC12	Q9UKN1	5478 aa		5.83	□□□□□ -1.48
TRMT1-222	ENST00000593157	KRTAP4-9	Q9BYQ8	210 aa		5.77	□□□□□ -1.49
TRMT1-222	ENST00000593157	LCE3D	Q9BYE3	92 aa		5.75	□□□□□ -1.49
TRMT1-222	ENST00000593157	LCE3E	Q5T5B0	92 aa		5.74	□□□□□ -1.49
TRMT1-222	ENST00000593157	KRTAP6-1	Q3LI64	71 aa		5.71	□□□□□ -1.5
TRMT1-222	ENST00000593157	KRTAP6-3	Q3LI67	103 aa		5.7	□□□□□ -1.5
TRMT1-222	ENST00000593157	SPRR2F	Q96RM1	72 aa		5.7	□□□□□ -1.5
TRMT1-222	ENST00000593157	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.66	□□□□□ -1.5
TRMT1-222	ENST00000593157	SYNE1	Q8NF91	8797 aa	Known RBP	5.61	□□□□□ -1.51
TRMT1-222	ENST00000593157	PRM1	P04553	51 aa		5.6	□□□□□ -1.51
TRMT1-222	ENST00000593157	KRTAP5-9	P26371	169 aa		5.56	□□□□□ -1.52
TRMT1-222	ENST00000593157	MDN1	Q9NU22	5596 aa		5.53	□□□□□ -1.52
TRMT1-222	ENST00000593157	DST	Q03001	7570 aa	Known RBP	5.52	□□□□□ -1.53
TRMT1-222	ENST00000593157	NEB	P20929	6669 aa		5.46	□□□□□ -1.54
TRMT1-222	ENST00000593157	SPRR2E	P22531	72 aa		5.39	□□□□□ -1.55
TRMT1-222	ENST00000593157	SPRR2B	P35325	72 aa		5.39	□□□□□ -1.55
TRMT1-222	ENST00000593157	SPRR2A	P35326	72 aa		5.39	□□□□□ -1.55
TRMT1-222	ENST00000593157	KRTAP9-4	Q9BYQ2	154 aa		5.34	□□□□□ -1.55
TRMT1-222	ENST00000593157	KRTAP6-2	Q3LI66	62 aa		5.33	□□□□□ -1.56
TRMT1-222	ENST00000593157	LCE1A	Q5T7P2	110 aa		5.33	□□□□□ -1.56
TRMT1-222	ENST00000593157	SPRR2D	P22532	72 aa		5.2	□□□□□ -1.58
TRMT1-222	ENST00000593157	KRTAP20-1	Q3LI63	56 aa		5.17	□□□□□ -1.58
TRMT1-222	ENST00000593157	MT3	P25713	68 aa		5.11	□□□□□ -1.59
TRMT1-222	ENST00000593157	KRTAP2-2	Q9BYT5	123 aa		5.02	□□□□□ -1.61
TRMT1-222	ENST00000593157	OBSCN	Q5VST9	7968 aa		4.68	□□□□□ -1.66
TRMT1-222	ENST00000593157	KRTAP5-4	Q6L8H1	288 aa		4.66	□□□□□ -1.66
TRMT1-222	ENST00000593157	MT4	P47944	62 aa		4.58	□□□□□ -1.68
TRMT1-222	ENST00000593157	LCE1D	Q5T752	114 aa		4.54	□□□□□ -1.68
TRMT1-222	ENST00000593157	LCE4A	Q5TA78	99 aa		4.54	□□□□□ -1.68
TRMT1-222	ENST00000593157	HMCN1	Q96RW7	5635 aa		4.47	□□□□□ -1.69
TRMT1-222	ENST00000593157	KRTAP4-6	Q9BYQ5	205 aa		4.47	□□□□□ -1.69
TRMT1-222	ENST00000593157	KRTAP5-2	Q701N4	177 aa		4.45	□□□□□ -1.7
TRMT1-222	ENST00000593157	KRTAP20-2	Q3LI61	65 aa		4.32	□□□□□ -1.72
TRMT1-222	ENST00000593157	MUC5AC	P98088	5654 aa		4.25	□□□□□ -1.73
TRMT1-222	ENST00000593157	LCE1E	Q5T753	118 aa		4.21	□□□□□ -1.74
TRMT1-222	ENST00000593157	GPR98	Q8WXG9	6306 aa		4.18	□□□□□ -1.74
TRMT1-222	ENST00000593157	AHNAK2	Q8IVF2	5795 aa		4.18	□□□□□ -1.74
TRMT1-222	ENST00000593157	KRTAP5-10	Q6L8G5	202 aa		4.18	□□□□□ -1.74
TRMT1-222	ENST00000593157	KRTAP5-3	Q6L8H2	238 aa		4.13	□□□□□ -1.75
TRMT1-222	ENST00000593157	KRTAP4-11	Q9BYQ6	195 aa		4.13	□□□□□ -1.75
TRMT1-222	ENST00000593157	KRTAP5-1	Q6L8H4	278 aa		4.11	□□□□□ -1.75
TRMT1-222	ENST00000593157	LCE1B	Q5T7P3	118 aa		3.95	□□□□□ -1.78
TRMT1-222	ENST00000593157	LCE1C	Q5T751	118 aa		3.89	□□□□□ -1.79
TRMT1-222	ENST00000593157	KRTAP4-2	Q9BYR5	136 aa		3.85	□□□□□ -1.79
TRMT1-222	ENST00000593157	KRTAP5-7	Q6L8G8	165 aa		3.79	□□□□□ -1.8
TRMT1-222	ENST00000593157	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.75	□□□□□ -1.81
TRMT1-222	ENST00000593157	KRTAP21-2	Q3LI59	83 aa		3.71	□□□□□ -1.82
TRMT1-222	ENST00000593157	KRTAP5-8	O75690	187 aa		3.7	□□□□□ -1.82
TRMT1-222	ENST00000593157	KRTAP21-1	Q3LI58	79 aa		3.64	□□□□□ -1.83
TRMT1-222	ENST00000593157	KRTAP9-9	Q9BYP9	154 aa		3.46	□□□□□ -1.86
TRMT1-222	ENST00000593157	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.42	□□□□□ -1.86
TRMT1-222	ENST00000593157	AHNAK	Q09666	5890 aa	Known RBP	3.32	□□□□□ -1.88
TRMT1-222	ENST00000593157	KRTAP5-11	Q6L8G4	156 aa		3.3	□□□□□ -1.88
TRMT1-222	ENST00000593157	KRTAP4-4	Q9BYR3	166 aa		3.25	□□□□□ -1.89
TRMT1-222	ENST00000593157	MUC19	Q7Z5P9	8384 aa		3.11	□□□□□ -1.91
TRMT1-222	ENST00000593157	LCE1F	Q5T754	118 aa		3.07	□□□□□ -1.92
TRMT1-222	ENST00000593157	KRTAP4-12	Q9BQ66	201 aa		2.99	□□□□□ -1.93
TRMT1-222	ENST00000593157	PHGR1	C9JFL3	82 aa		2.83	□□□□□ -1.96
TRMT1-222	ENST00000593157	MUC16	Q8WXI7	14507 aa		1.98	□□□□□ -2.09

Retrieved 78 of 20,778 RNA–protein pairs in 93.4 ms