RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 K7ERS5 55 aa5.44□□□□□ -1.54
ERCC1-217ENST00000592905 A6NED7 52 aa5.42□□□□□ -1.54
ERCC1-217ENST00000592905 MT1GP13640 62 aa5.41□□□□□ -1.54
ERCC1-217ENST00000592905 RPS28P62857 69 aaKnown RBP5.41□□□□□ -1.54
ERCC1-217ENST00000592905 MT1LQ93083 61 aa5.4□□□□□ -1.54
ERCC1-217ENST00000592905 MT1MQ8N339 61 aa5.35□□□□□ -1.55
ERCC1-217ENST00000592905 KRTAP25-1Q3LHN0 102 aa5.34□□□□□ -1.55
ERCC1-217ENST00000592905 PP632Q6XCG6 107 aa5.34□□□□□ -1.55
ERCC1-217ENST00000592905 KRTAP12-3P60328 96 aa5.32□□□□□ -1.56
ERCC1-217ENST00000592905 KRTAP4-3Q9BYR4 195 aa5.27□□□□□ -1.57
ERCC1-217ENST00000592905 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
ERCC1-217ENST00000592905 CDC42SE1Q9NRR8 79 aa5.18□□□□□ -1.58
ERCC1-217ENST00000592905 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
ERCC1-217ENST00000592905 ROMO1P60602 79 aa5.13□□□□□ -1.59
ERCC1-217ENST00000592905 KRTAP23-1A1A580 65 aa5.11□□□□□ -1.59
ERCC1-217ENST00000592905 SVIPQ8NHG7 77 aa5.1□□□□□ -1.59
ERCC1-217ENST00000592905 MT4P47944 62 aa5.03□□□□□ -1.6
ERCC1-217ENST00000592905 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
ERCC1-217ENST00000592905 LCE4AQ5TA78 99 aa5.03□□□□□ -1.6
ERCC1-217ENST00000592905 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
ERCC1-217ENST00000592905 HMCN1Q96RW7 5635 aa4.98□□□□□ -1.61
ERCC1-217ENST00000592905 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
ERCC1-217ENST00000592905 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
ERCC1-217ENST00000592905 KRTAP19-4Q3LI73 84 aa4.92□□□□□ -1.62
ERCC1-217ENST00000592905 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
ERCC1-217ENST00000592905 GPR98Q8WXG9 6306 aa4.89□□□□□ -1.63
ERCC1-217ENST00000592905 KRTAP4-6Q9BYQ5 205 aa4.89□□□□□ -1.63
ERCC1-217ENST00000592905 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
ERCC1-217ENST00000592905 BRK1Q8WUW1 75 aa4.82□□□□□ -1.64
ERCC1-217ENST00000592905 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
ERCC1-217ENST00000592905 AHNAK2Q8IVF2 5795 aa4.75□□□□□ -1.65
ERCC1-217ENST00000592905 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
ERCC1-217ENST00000592905 KRTAP12-4P60329 112 aa4.69□□□□□ -1.66
ERCC1-217ENST00000592905 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
ERCC1-217ENST00000592905 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
ERCC1-217ENST00000592905 MT1AP04731 61 aa4.58□□□□□ -1.68
ERCC1-217ENST00000592905 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
ERCC1-217ENST00000592905 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
ERCC1-217ENST00000592905 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
ERCC1-217ENST00000592905 PMAIP1Q13794 54 aa4.53□□□□□ -1.68
ERCC1-217ENST00000592905 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
ERCC1-217ENST00000592905 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
ERCC1-217ENST00000592905 PRAC1Q96KF2 57 aa4.38□□□□□ -1.71
ERCC1-217ENST00000592905 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
ERCC1-217ENST00000592905 KRTAP5-7Q6L8G8 165 aa4.35□□□□□ -1.71
ERCC1-217ENST00000592905 PRO0628Q9UI54 55 aa4.33□□□□□ -1.72
ERCC1-217ENST00000592905 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
ERCC1-217ENST00000592905 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
ERCC1-217ENST00000592905 MT3P25713 68 aa4.18□□□□□ -1.74
ERCC1-217ENST00000592905 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
ERCC1-217ENST00000592905 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
ERCC1-217ENST00000592905 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
ERCC1-217ENST00000592905 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
ERCC1-217ENST00000592905 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
ERCC1-217ENST00000592905 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
ERCC1-217ENST00000592905 AHNAKQ09666 5890 aaKnown RBP3.86□□□□□ -1.79
ERCC1-217ENST00000592905 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
ERCC1-217ENST00000592905 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
ERCC1-217ENST00000592905 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
ERCC1-217ENST00000592905 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
ERCC1-217ENST00000592905 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
ERCC1-217ENST00000592905 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
ERCC1-217ENST00000592905 H3BS24 57 aa3.45□□□□□ -1.86
ERCC1-217ENST00000592905 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
ERCC1-217ENST00000592905 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
ERCC1-217ENST00000592905 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
ERCC1-217ENST00000592905 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
ERCC1-217ENST00000592905 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
ERCC1-217ENST00000592905 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
ERCC1-217ENST00000592905 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
ERCC1-217ENST00000592905 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
ERCC1-217ENST00000592905 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
ERCC1-217ENST00000592905 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
ERCC1-217ENST00000592905 PRM1P04553 51 aa2.66□□□□□ -1.98
ERCC1-217ENST00000592905 INE1O15225 51 aa2.62□□□□□ -1.99
ERCC1-217ENST00000592905 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
ERCC1-217ENST00000592905 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
ERCC1-217ENST00000592905 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 71.3 ms