RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 SPRR2BP35325 72 aa7.22□□□□□ -1.25
TCF3-216ENST00000592395 SPRR2AP35326 72 aa7.22□□□□□ -1.25
TCF3-216ENST00000592395 UQCR11O14957 56 aa7.18□□□□□ -1.26
TCF3-216ENST00000592395 KRTAP20-1Q3LI63 56 aa7.12□□□□□ -1.27
TCF3-216ENST00000592395 V9GYY9 64 aa7.12□□□□□ -1.27
TCF3-216ENST00000592395 Q1T7F1 81 aa7.07□□□□□ -1.28
TCF3-216ENST00000592395 MIR22HGQ0VDD5 57 aa7.03□□□□□ -1.28
TCF3-216ENST00000592395 PSPHP1O15172 72 aa7.02□□□□□ -1.29
TCF3-216ENST00000592395 C10orf95Q9H7T3 257 aa7.02□□□□□ -1.29
TCF3-216ENST00000592395 KRTAP2-3P0C7H8 128 aa7□□□□□ -1.29
TCF3-216ENST00000592395 KRTAP2-4Q9BYR9 128 aa7□□□□□ -1.29
TCF3-216ENST00000592395 SPRR2DP22532 72 aa6.98□□□□□ -1.29
TCF3-216ENST00000592395 KRTAP19-7Q3SYF9 63 aa6.98□□□□□ -1.29
TCF3-216ENST00000592395 TNP1P09430 55 aa6.97□□□□□ -1.29
TCF3-216ENST00000592395 NDUFAF8A1L188 74 aa6.96□□□□□ -1.3
TCF3-216ENST00000592395 MT1EP04732 61 aa6.91□□□□□ -1.3
TCF3-216ENST00000592395 RPS28P62857 69 aaKnown RBP6.91□□□□□ -1.3
TCF3-216ENST00000592395 K7ERS5 55 aa6.87□□□□□ -1.31
TCF3-216ENST00000592395 KRTAP19-5Q3LI72 72 aa6.86□□□□□ -1.31
TCF3-216ENST00000592395 LCE3AQ5TA76 89 aa6.83□□□□□ -1.32
TCF3-216ENST00000592395 KRTAP19-3Q7Z4W3 81 aa6.82□□□□□ -1.32
TCF3-216ENST00000592395 A6NED7 52 aa6.81□□□□□ -1.32
TCF3-216ENST00000592395 KRTAP2-1Q9BYU5 128 aa6.8□□□□□ -1.32
TCF3-216ENST00000592395 KRTAP25-1Q3LHN0 102 aa6.7□□□□□ -1.34
TCF3-216ENST00000592395 MT1GP13640 62 aa6.68□□□□□ -1.34
TCF3-216ENST00000592395 LCE1FQ5T754 118 aa6.67□□□□□ -1.34
TCF3-216ENST00000592395 MT1LQ93083 61 aa6.65□□□□□ -1.34
TCF3-216ENST00000592395 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
TCF3-216ENST00000592395 KRTAP12-3P60328 96 aa6.59□□□□□ -1.35
TCF3-216ENST00000592395 MT1MQ8N339 61 aa6.57□□□□□ -1.36
TCF3-216ENST00000592395 CDC42SE1Q9NRR8 79 aa6.54□□□□□ -1.36
TCF3-216ENST00000592395 DSTQ03001 7570 aaKnown RBP6.52□□□□□ -1.37
TCF3-216ENST00000592395 ROMO1P60602 79 aa6.43□□□□□ -1.38
TCF3-216ENST00000592395 KRTAP4-3Q9BYR4 195 aa6.37□□□□□ -1.39
TCF3-216ENST00000592395 LCE1EQ5T753 118 aa6.26□□□□□ -1.41
TCF3-216ENST00000592395 LCE3CQ5T5A8 94 aa6.22□□□□□ -1.41
TCF3-216ENST00000592395 KRTAP5-4Q6L8H1 288 aa6.12□□□□□ -1.43
TCF3-216ENST00000592395 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
TCF3-216ENST00000592395 MT4P47944 62 aa6.08□□□□□ -1.44
TCF3-216ENST00000592395 KRTAP5-11Q6L8G4 156 aa6.03□□□□□ -1.44
TCF3-216ENST00000592395 KRTAP5-5Q701N2 237 aaPredicted RBP6□□□□□ -1.45
TCF3-216ENST00000592395 HMCN1Q96RW7 5635 aa5.94□□□□□ -1.46
TCF3-216ENST00000592395 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
TCF3-216ENST00000592395 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
TCF3-216ENST00000592395 KRTAP20-2Q3LI61 65 aa5.76□□□□□ -1.49
TCF3-216ENST00000592395 GPR98Q8WXG9 6306 aa5.75□□□□□ -1.49
TCF3-216ENST00000592395 PMAIP1Q13794 54 aa5.74□□□□□ -1.49
TCF3-216ENST00000592395 KRTAP9-6A8MVA2 160 aa5.72□□□□□ -1.49
TCF3-216ENST00000592395 SYNE1Q8NF91 8797 aaKnown RBP5.69□□□□□ -1.5
TCF3-216ENST00000592395 LCE3EQ5T5B0 92 aa5.69□□□□□ -1.5
TCF3-216ENST00000592395 MT1AP04731 61 aa5.67□□□□□ -1.5
TCF3-216ENST00000592395 AHNAK2Q8IVF2 5795 aa5.64□□□□□ -1.51
TCF3-216ENST00000592395 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.63□□□□□ -1.51
TCF3-216ENST00000592395 KRTAP6-1Q3LI64 71 aa5.61□□□□□ -1.51
TCF3-216ENST00000592395 KRTAP5-10Q6L8G5 202 aa5.55□□□□□ -1.52
TCF3-216ENST00000592395 PRO0628Q9UI54 55 aa5.5□□□□□ -1.53
TCF3-216ENST00000592395 KRTAP5-2Q701N4 177 aa5.41□□□□□ -1.54
TCF3-216ENST00000592395 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
TCF3-216ENST00000592395 KRTAP5-7Q6L8G8 165 aa5.31□□□□□ -1.56
TCF3-216ENST00000592395 KTN1-AS1Q86SY8 53 aa5.23□□□□□ -1.57
TCF3-216ENST00000592395 KRTAP5-8O75690 187 aa5.01□□□□□ -1.61
TCF3-216ENST00000592395 KRTAP5-1Q6L8H4 278 aa4.97□□□□□ -1.61
TCF3-216ENST00000592395 OBSCNQ5VST9 7968 aa4.96□□□□□ -1.61
TCF3-216ENST00000592395 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
TCF3-216ENST00000592395 KRTAP4-4Q9BYR3 166 aa4.69□□□□□ -1.66
TCF3-216ENST00000592395 LUZP6Q538Z0 58 aa4.62□□□□□ -1.67
TCF3-216ENST00000592395 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
TCF3-216ENST00000592395 MUC5BQ9HC84 5762 aaPredicted RBP4.56□□□□□ -1.68
TCF3-216ENST00000592395 AHNAKQ09666 5890 aaKnown RBP4.53□□□□□ -1.68
TCF3-216ENST00000592395 LCE1BQ5T7P3 118 aa4.39□□□□□ -1.71
TCF3-216ENST00000592395 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
TCF3-216ENST00000592395 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
TCF3-216ENST00000592395 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
TCF3-216ENST00000592395 PRM1P04553 51 aa3.3□□□□□ -1.88
TCF3-216ENST00000592395 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
TCF3-216ENST00000592395 INE1O15225 51 aa3.17□□□□□ -1.9
TCF3-216ENST00000592395 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
TCF3-216ENST00000592395 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 176.1 ms