RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 HRNRQ86YZ3 2850 aaPredicted RBP1.33□□□□□ -2.2
VMP1-212ENST00000591782 C9orf92A6NGG3 77 aa1.33□□□□□ -2.2
VMP1-212ENST00000591782 SYNE2Q8WXH0 6885 aaKnown RBP1.31□□□□□ -2.2
VMP1-212ENST00000591782 DNAH11Q96DT5 4516 aa1.31□□□□□ -2.2
VMP1-212ENST00000591782 LRP2P98164 4655 aa1.31□□□□□ -2.2
VMP1-212ENST00000591782 VPS13BQ7Z7G8 4022 aa1.31□□□□□ -2.2
VMP1-212ENST00000591782 PKHD1L1Q86WI1 4243 aa1.3□□□□□ -2.2
VMP1-212ENST00000591782 DEFB4AO15263 64 aa1.3□□□□□ -2.2
VMP1-212ENST00000591782 KRTAP20-1Q3LI63 56 aa1.3□□□□□ -2.2
VMP1-212ENST00000591782 VPS13DQ5THJ4 4388 aa1.3□□□□□ -2.2
VMP1-212ENST00000591782 DNAH6Q9C0G6 4158 aa1.3□□□□□ -2.2
VMP1-212ENST00000591782 FAT1Q14517 4588 aa1.29□□□□□ -2.2
VMP1-212ENST00000591782 DNAH2Q9P225 4427 aa1.28□□□□□ -2.2
VMP1-212ENST00000591782 APOBP04114 4563 aaKnown RBP1.27□□□□□ -2.21
VMP1-212ENST00000591782 DNAH5Q8TE73 4624 aa1.26□□□□□ -2.21
VMP1-212ENST00000591782 MACF1Q9UPN3 7388 aaKnown RBP1.25□□□□□ -2.21
VMP1-212ENST00000591782 PKD1P98161 4303 aa1.25□□□□□ -2.21
VMP1-212ENST00000591782 LRP1BQ9NZR2 4599 aa1.25□□□□□ -2.21
VMP1-212ENST00000591782 M0R2T5 61 aa1.24□□□□□ -2.21
VMP1-212ENST00000591782 DNAH17Q9UFH2 4485 aa1.24□□□□□ -2.21
VMP1-212ENST00000591782 FAT3Q8TDW7 4589 aa1.22□□□□□ -2.21
VMP1-212ENST00000591782 FCGBPQ9Y6R7 5405 aaPredicted RBP1.21□□□□□ -2.22
VMP1-212ENST00000591782 MUC12Q9UKN1 5478 aa1.2□□□□□ -2.22
VMP1-212ENST00000591782 KMT2DO14686 5537 aa1.2□□□□□ -2.22
VMP1-212ENST00000591782 LRP1Q07954 4544 aaKnown RBP1.19□□□□□ -2.22
VMP1-212ENST00000591782 TNXBP22105 4242 aa1.19□□□□□ -2.22
VMP1-212ENST00000591782 USH2AO75445 5202 aa1.18□□□□□ -2.22
VMP1-212ENST00000591782 KRTAP2-3P0C7H8 128 aa1.16□□□□□ -2.22
VMP1-212ENST00000591782 KRTAP2-4Q9BYR9 128 aa1.16□□□□□ -2.22
VMP1-212ENST00000591782 MDN1Q9NU22 5596 aa1.14□□□□□ -2.23
VMP1-212ENST00000591782 AHNAK2Q8IVF2 5795 aa1.13□□□□□ -2.23
VMP1-212ENST00000591782 KRTAP4-1Q9BYQ7 146 aa1.12□□□□□ -2.23
VMP1-212ENST00000591782 DNAH8Q96JB1 4490 aa1.11□□□□□ -2.23
VMP1-212ENST00000591782 LPAP08519 4548 aa1.11□□□□□ -2.23
VMP1-212ENST00000591782 SMR3BP02814 79 aaPredicted RBP1.11□□□□□ -2.23
VMP1-212ENST00000591782 KRTAP8-1Q8IUC2 63 aa1.11□□□□□ -2.23
VMP1-212ENST00000591782 KRTAP2-1Q9BYU5 128 aa1.11□□□□□ -2.23
VMP1-212ENST00000591782 DSTQ03001 7570 aaKnown RBP1.09□□□□□ -2.23
VMP1-212ENST00000591782 MT1HL1P0DM35 61 aa1.05□□□□□ -2.24
VMP1-212ENST00000591782 KRTAP10-4P60372 401 aaPredicted RBP1.05□□□□□ -2.24
VMP1-212ENST00000591782 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
VMP1-212ENST00000591782 FLGP20930 4061 aaPredicted RBP1.05□□□□□ -2.24
VMP1-212ENST00000591782 MUC5BQ9HC84 5762 aaPredicted RBP1.03□□□□□ -2.25
VMP1-212ENST00000591782 MUC17Q685J3 4493 aa1.02□□□□□ -2.25
VMP1-212ENST00000591782 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
VMP1-212ENST00000591782 HMCN1Q96RW7 5635 aa0.99□□□□□ -2.25
VMP1-212ENST00000591782 PRM1P04553 51 aa0.95□□□□□ -2.26
VMP1-212ENST00000591782 KRTAP19-6Q3LI70 58 aa0.94□□□□□ -2.26
VMP1-212ENST00000591782 MT1HP80294 61 aa0.93□□□□□ -2.26
VMP1-212ENST00000591782 SPRR2EP22531 72 aa0.92□□□□□ -2.26
VMP1-212ENST00000591782 SPRR2BP35325 72 aa0.92□□□□□ -2.26
VMP1-212ENST00000591782 SPRR2AP35326 72 aa0.92□□□□□ -2.26
VMP1-212ENST00000591782 MUC5ACP98088 5654 aa0.92□□□□□ -2.26
VMP1-212ENST00000591782 MT1AP04731 61 aa0.9□□□□□ -2.27
VMP1-212ENST00000591782 SPRR2DP22532 72 aa0.9□□□□□ -2.27
VMP1-212ENST00000591782 SPRR2GQ9BYE4 73 aa0.89□□□□□ -2.27
VMP1-212ENST00000591782 KRTAP19-5Q3LI72 72 aa0.88□□□□□ -2.27
VMP1-212ENST00000591782 SPRR2FQ96RM1 72 aa0.83□□□□□ -2.28
VMP1-212ENST00000591782 KRTAP19-2Q3LHN2 52 aa0.82□□□□□ -2.28
VMP1-212ENST00000591782 MT1EP04732 61 aa0.81□□□□□ -2.28
VMP1-212ENST00000591782 MT4P47944 62 aa0.81□□□□□ -2.28
VMP1-212ENST00000591782 MT1LQ93083 61 aa0.79□□□□□ -2.28
VMP1-212ENST00000591782 KRTAP19-8Q3LI54 63 aa0.78□□□□□ -2.28
VMP1-212ENST00000591782 KRTAP6-2Q3LI66 62 aa0.78□□□□□ -2.28
VMP1-212ENST00000591782 KRTAP19-3Q7Z4W3 81 aa0.77□□□□□ -2.29
VMP1-212ENST00000591782 MT2AP02795 61 aa0.75□□□□□ -2.29
VMP1-212ENST00000591782 MT1XP80297 61 aa0.75□□□□□ -2.29
VMP1-212ENST00000591782 MT1FP04733 61 aa0.74□□□□□ -2.29
VMP1-212ENST00000591782 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
VMP1-212ENST00000591782 SYNE1Q8NF91 8797 aaKnown RBP0.73□□□□□ -2.29
VMP1-212ENST00000591782 MT1BP07438 61 aa0.66□□□□□ -2.3
VMP1-212ENST00000591782 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
VMP1-212ENST00000591782 KRTAP20-2Q3LI61 65 aa0.65□□□□□ -2.31
VMP1-212ENST00000591782 KRTAP19-7Q3SYF9 63 aa0.65□□□□□ -2.31
VMP1-212ENST00000591782 MT1GP13640 62 aa0.64□□□□□ -2.31
VMP1-212ENST00000591782 PHGR1C9JFL3 82 aa0.63□□□□□ -2.31
VMP1-212ENST00000591782 MT1MQ8N339 61 aa0.62□□□□□ -2.31
VMP1-212ENST00000591782 KRTAP6-1Q3LI64 71 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 93 ms