RNA–Protein interactions for RNA: ENST00000591762.1

SPHK1-209, Transcript of sphingosine kinase 1, humanhuman

TSL 2

Gene SPHK1, Length 2,502 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-209ENST00000591762 KRTAP2-3P0C7H8 128 aa6.03□□□□□ -1.44
SPHK1-209ENST00000591762 KRTAP2-4Q9BYR9 128 aa6.03□□□□□ -1.44
SPHK1-209ENST00000591762 KRTAP2-1Q9BYU5 128 aa6.03□□□□□ -1.44
SPHK1-209ENST00000591762 MACF1Q9UPN3 7388 aaKnown RBP6.02□□□□□ -1.45
SPHK1-209ENST00000591762 KRTAP9-2Q9BYQ4 174 aa5.97□□□□□ -1.45
SPHK1-209ENST00000591762 KRTAP19-4Q3LI73 84 aa5.93□□□□□ -1.46
SPHK1-209ENST00000591762 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
SPHK1-209ENST00000591762 SPRR2FQ96RM1 72 aa5.89□□□□□ -1.47
SPHK1-209ENST00000591762 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
SPHK1-209ENST00000591762 KRTAP19-3Q7Z4W3 81 aa5.87□□□□□ -1.47
SPHK1-209ENST00000591762 MT1MQ8N339 61 aa5.82□□□□□ -1.48
SPHK1-209ENST00000591762 MT1GP13640 62 aa5.82□□□□□ -1.48
SPHK1-209ENST00000591762 CRCT1Q9UGL9 99 aa5.8□□□□□ -1.48
SPHK1-209ENST00000591762 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
SPHK1-209ENST00000591762 DSTQ03001 7570 aaKnown RBP5.8□□□□□ -1.48
SPHK1-209ENST00000591762 MDN1Q9NU22 5596 aa5.73□□□□□ -1.49
SPHK1-209ENST00000591762 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
SPHK1-209ENST00000591762 KRTAP5-9P26371 169 aa5.54□□□□□ -1.52
SPHK1-209ENST00000591762 LCE1AQ5T7P2 110 aa5.52□□□□□ -1.53
SPHK1-209ENST00000591762 KRTAP9-6A0A140TA67 174 aa5.47□□□□□ -1.53
SPHK1-209ENST00000591762 SPRR2EP22531 72 aa5.45□□□□□ -1.54
SPHK1-209ENST00000591762 SPRR2BP35325 72 aa5.45□□□□□ -1.54
SPHK1-209ENST00000591762 SPRR2AP35326 72 aa5.45□□□□□ -1.54
SPHK1-209ENST00000591762 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
SPHK1-209ENST00000591762 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.35□□□□□ -1.55
SPHK1-209ENST00000591762 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
SPHK1-209ENST00000591762 KRTAP4-9Q9BYQ8 210 aa5.27□□□□□ -1.57
SPHK1-209ENST00000591762 KRTAP6-3Q3LI67 103 aa5.26□□□□□ -1.57
SPHK1-209ENST00000591762 SYNE1Q8NF91 8797 aaKnown RBP5.24□□□□□ -1.57
SPHK1-209ENST00000591762 KRTAP6-1Q3LI64 71 aa5.24□□□□□ -1.57
SPHK1-209ENST00000591762 SPRR2DP22532 72 aa5.22□□□□□ -1.57
SPHK1-209ENST00000591762 KRTAP5-5Q701N2 237 aaPredicted RBP5.17□□□□□ -1.58
SPHK1-209ENST00000591762 MT1AP04731 61 aa5.16□□□□□ -1.58
SPHK1-209ENST00000591762 KRTAP9-7A8MTY7 169 aa5.01□□□□□ -1.61
SPHK1-209ENST00000591762 LCE3DQ9BYE3 92 aa5□□□□□ -1.61
SPHK1-209ENST00000591762 NEBP20929 6669 aa4.97□□□□□ -1.61
SPHK1-209ENST00000591762 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
SPHK1-209ENST00000591762 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
SPHK1-209ENST00000591762 PRM1P04553 51 aa4.88□□□□□ -1.63
SPHK1-209ENST00000591762 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
SPHK1-209ENST00000591762 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
SPHK1-209ENST00000591762 KRTAP5-4Q6L8H1 288 aa4.71□□□□□ -1.66
SPHK1-209ENST00000591762 MT3P25713 68 aa4.66□□□□□ -1.66
SPHK1-209ENST00000591762 MT4P47944 62 aa4.64□□□□□ -1.67
SPHK1-209ENST00000591762 KRTAP4-6Q9BYQ5 205 aa4.63□□□□□ -1.67
SPHK1-209ENST00000591762 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
SPHK1-209ENST00000591762 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
SPHK1-209ENST00000591762 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
SPHK1-209ENST00000591762 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.7
SPHK1-209ENST00000591762 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
SPHK1-209ENST00000591762 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
SPHK1-209ENST00000591762 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
SPHK1-209ENST00000591762 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
SPHK1-209ENST00000591762 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
SPHK1-209ENST00000591762 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
SPHK1-209ENST00000591762 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
SPHK1-209ENST00000591762 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
SPHK1-209ENST00000591762 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
SPHK1-209ENST00000591762 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
SPHK1-209ENST00000591762 AHNAK2Q8IVF2 5795 aa3.7□□□□□ -1.82
SPHK1-209ENST00000591762 KRTAP5-10Q6L8G5 202 aa3.68□□□□□ -1.82
SPHK1-209ENST00000591762 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
SPHK1-209ENST00000591762 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
SPHK1-209ENST00000591762 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
SPHK1-209ENST00000591762 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
SPHK1-209ENST00000591762 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.86
SPHK1-209ENST00000591762 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
SPHK1-209ENST00000591762 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
SPHK1-209ENST00000591762 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
SPHK1-209ENST00000591762 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
SPHK1-209ENST00000591762 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
SPHK1-209ENST00000591762 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.91
SPHK1-209ENST00000591762 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
SPHK1-209ENST00000591762 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
SPHK1-209ENST00000591762 KRTAP21-1Q3LI58 79 aa3.11□□□□□ -1.91
SPHK1-209ENST00000591762 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
SPHK1-209ENST00000591762 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
SPHK1-209ENST00000591762 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms