RNA–Protein interactions for RNA: ENST00000591338.1

LINC00662-208, long intergenic non-protein coding RNA 662, human

TSL 2

Gene LINC00662, Length 436 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00662-208	ENST00000591338	PRO2289	Q9P1D8	64 aa		4.91	□□□□□ -1.62
LINC00662-208	ENST00000591338	MACF1	Q9UPN3	7388 aa	Known RBP	4.88	□□□□□ -1.63
LINC00662-208	ENST00000591338	C10orf95	Q9H7T3	257 aa		4.88	□□□□□ -1.63
LINC00662-208	ENST00000591338	PRO0628	Q9UI54	55 aa		4.86	□□□□□ -1.63
LINC00662-208	ENST00000591338	ROMO1	P60602	79 aa		4.8	□□□□□ -1.64
LINC00662-208	ENST00000591338	PMAIP1	Q13794	54 aa		4.8	□□□□□ -1.64
LINC00662-208	ENST00000591338	TNP1	P09430	55 aa		4.75	□□□□□ -1.65
LINC00662-208	ENST00000591338	KRTAP6-3	Q3LI67	103 aa		4.75	□□□□□ -1.65
LINC00662-208	ENST00000591338	PRAC1	Q96KF2	57 aa		4.73	□□□□□ -1.65
LINC00662-208	ENST00000591338	KRTAP10-12	P60413	245 aa		4.71	□□□□□ -1.66
LINC00662-208	ENST00000591338	KRTAP25-1	Q3LHN0	102 aa		4.71	□□□□□ -1.66
LINC00662-208	ENST00000591338	NEB	P20929	6669 aa		4.65	□□□□□ -1.66
LINC00662-208	ENST00000591338	MUC12	Q9UKN1	5478 aa		4.59	□□□□□ -1.68
LINC00662-208	ENST00000591338	LCE3A	Q5TA76	89 aa		4.57	□□□□□ -1.68
LINC00662-208	ENST00000591338	KMT2D	O14686	5537 aa		4.55	□□□□□ -1.68
LINC00662-208	ENST00000591338	KRTAP20-1	Q3LI63	56 aa		4.52	□□□□□ -1.69
LINC00662-208	ENST00000591338	KRTAP8-1	Q8IUC2	63 aa		4.52	□□□□□ -1.69
LINC00662-208	ENST00000591338	KTN1-AS1	Q86SY8	53 aa		4.51	□□□□□ -1.69
LINC00662-208	ENST00000591338	PP632	Q6XCG6	107 aa		4.5	□□□□□ -1.69
LINC00662-208	ENST00000591338	NDUFAF8	A1L188	74 aa		4.48	□□□□□ -1.69
LINC00662-208	ENST00000591338	KRTAP19-5	Q3LI72	72 aa		4.45	□□□□□ -1.7
LINC00662-208	ENST00000591338	KRTAP5-9	P26371	169 aa		4.43	□□□□□ -1.7
LINC00662-208	ENST00000591338	KRTAP19-7	Q3SYF9	63 aa		4.43	□□□□□ -1.7
LINC00662-208	ENST00000591338	LCE1F	Q5T754	118 aa		4.42	□□□□□ -1.7
LINC00662-208	ENST00000591338	MDN1	Q9NU22	5596 aa		4.41	□□□□□ -1.7
LINC00662-208	ENST00000591338	KRTAP12-3	P60328	96 aa		4.4	□□□□□ -1.71
LINC00662-208	ENST00000591338	SPRR2F	Q96RM1	72 aa		4.39	□□□□□ -1.71
LINC00662-208	ENST00000591338	KRTAP9-6	A8MVA2	160 aa		4.35	□□□□□ -1.71
LINC00662-208	ENST00000591338	MT1E	P04732	61 aa		4.35	□□□□□ -1.71
LINC00662-208	ENST00000591338	KRTAP2-3	P0C7H8	128 aa		4.33	□□□□□ -1.72
LINC00662-208	ENST00000591338	KRTAP2-4	Q9BYR9	128 aa		4.33	□□□□□ -1.72
LINC00662-208	ENST00000591338	KRTAP5-1	Q6L8H4	278 aa		4.31	□□□□□ -1.72
LINC00662-208	ENST00000591338	SPRR2E	P22531	72 aa		4.25	□□□□□ -1.73
LINC00662-208	ENST00000591338	SPRR2B	P35325	72 aa		4.25	□□□□□ -1.73
LINC00662-208	ENST00000591338	SPRR2A	P35326	72 aa		4.25	□□□□□ -1.73
LINC00662-208	ENST00000591338	MT1L	Q93083	61 aa		4.24	□□□□□ -1.73
LINC00662-208	ENST00000591338	KRTAP19-3	Q7Z4W3	81 aa		4.22	□□□□□ -1.73
LINC00662-208	ENST00000591338	MT1G	P13640	62 aa		4.19	□□□□□ -1.74
LINC00662-208	ENST00000591338	LCE3C	Q5T5A8	94 aa		4.18	□□□□□ -1.74
LINC00662-208	ENST00000591338	KRTAP2-1	Q9BYU5	128 aa		4.18	□□□□□ -1.74
LINC00662-208	ENST00000591338	KRTAP5-4	Q6L8H1	288 aa		4.13	□□□□□ -1.75
LINC00662-208	ENST00000591338	MT1M	Q8N339	61 aa		4.12	□□□□□ -1.75
LINC00662-208	ENST00000591338	SPRR2D	P22532	72 aa		4.1	□□□□□ -1.75
LINC00662-208	ENST00000591338	KRTAP4-4	Q9BYR3	166 aa		4.1	□□□□□ -1.75
LINC00662-208	ENST00000591338	KRTAP4-3	Q9BYR4	195 aa		4.03	□□□□□ -1.76
LINC00662-208	ENST00000591338	SPRR5	A0A1B0GTR4	108 aa		3.92	□□□□□ -1.78
LINC00662-208	ENST00000591338	GPR98	Q8WXG9	6306 aa		3.92	□□□□□ -1.78
LINC00662-208	ENST00000591338	DST	Q03001	7570 aa	Known RBP	3.89	□□□□□ -1.79
LINC00662-208	ENST00000591338	LCE3E	Q5T5B0	92 aa		3.8	□□□□□ -1.8
LINC00662-208	ENST00000591338	OBSCN	Q5VST9	7968 aa		3.76	□□□□□ -1.81
LINC00662-208	ENST00000591338	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.72	□□□□□ -1.81
LINC00662-208	ENST00000591338	LUZP6	Q538Z0	58 aa		3.68	□□□□□ -1.82
LINC00662-208	ENST00000591338	HMCN1	Q96RW7	5635 aa		3.63	□□□□□ -1.83
LINC00662-208	ENST00000591338	MT1A	P04731	61 aa		3.62	□□□□□ -1.83
LINC00662-208	ENST00000591338	MT4	P47944	62 aa		3.62	□□□□□ -1.83
LINC00662-208	ENST00000591338	AHNAK2	Q8IVF2	5795 aa		3.58	□□□□□ -1.84
LINC00662-208	ENST00000591338	KRTAP6-1	Q3LI64	71 aa		3.58	□□□□□ -1.84
LINC00662-208	ENST00000591338	KRTAP5-10	Q6L8G5	202 aa		3.55	□□□□□ -1.84
LINC00662-208	ENST00000591338	SYNE1	Q8NF91	8797 aa	Known RBP	3.53	□□□□□ -1.84
LINC00662-208	ENST00000591338	KRTAP12-4	P60329	112 aa		3.5	□□□□□ -1.85
LINC00662-208	ENST00000591338	KRTAP5-7	Q6L8G8	165 aa		3.44	□□□□□ -1.86
LINC00662-208	ENST00000591338	KRTAP20-2	Q3LI61	65 aa		3.41	□□□□□ -1.86
LINC00662-208	ENST00000591338	KRTAP5-2	Q701N4	177 aa		3.38	□□□□□ -1.87
LINC00662-208	ENST00000591338	KRTAP6-2	Q3LI66	62 aa		3.33	□□□□□ -1.88
LINC00662-208	ENST00000591338	LCE1C	Q5T751	118 aa		3.24	□□□□□ -1.89
LINC00662-208	ENST00000591338	LCE1B	Q5T7P3	118 aa		3.24	□□□□□ -1.89
LINC00662-208	ENST00000591338	LCE3D	Q9BYE3	92 aa		3.06	□□□□□ -1.92
LINC00662-208	ENST00000591338	AHNAK	Q09666	5890 aa	Known RBP	3.01	□□□□□ -1.93
LINC00662-208	ENST00000591338	MUC5AC	P98088	5654 aa		2.99	□□□□□ -1.93
LINC00662-208	ENST00000591338	KRTAP5-8	O75690	187 aa		2.99	□□□□□ -1.93
LINC00662-208	ENST00000591338	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.97	□□□□□ -1.93
LINC00662-208	ENST00000591338	INE1	O15225	51 aa		2.87	□□□□□ -1.95
LINC00662-208	ENST00000591338	MUC19	Q7Z5P9	8384 aa		2.63	□□□□□ -1.99
LINC00662-208	ENST00000591338	PRM1	P04553	51 aa		2.49	□□□□□ -2.01
LINC00662-208	ENST00000591338	KRTAP21-2	Q3LI59	83 aa		2.35	□□□□□ -2.03
LINC00662-208	ENST00000591338	PHGR1	C9JFL3	82 aa		2.08	□□□□□ -2.08
LINC00662-208	ENST00000591338	KRTAP21-1	Q3LI58	79 aa		1.58	□□□□□ -2.16
LINC00662-208	ENST00000591338	MUC16	Q8WXI7	14507 aa		1.34	□□□□□ -2.19

Retrieved 78 of 20,778 RNA–protein pairs in 89.7 ms