RNA–Protein interactions for RNA: ENST00000591309.5

ERCC2-212, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC2, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-212ENST00000591309 KRTAP19-3Q7Z4W3 81 aa7.57□□□□□ -1.2
ERCC2-212ENST00000591309 LCE5AQ5TCM9 118 aa7.52□□□□□ -1.21
ERCC2-212ENST00000591309 KRTAP25-1Q3LHN0 102 aa7.46□□□□□ -1.22
ERCC2-212ENST00000591309 MT1GP13640 62 aa7.44□□□□□ -1.22
ERCC2-212ENST00000591309 PP632Q6XCG6 107 aa7.44□□□□□ -1.22
ERCC2-212ENST00000591309 MT1LQ93083 61 aa7.36□□□□□ -1.23
ERCC2-212ENST00000591309 KRTAP12-3P60328 96 aa7.32□□□□□ -1.24
ERCC2-212ENST00000591309 CDC42SE1Q9NRR8 79 aa7.3□□□□□ -1.24
ERCC2-212ENST00000591309 MT1MQ8N339 61 aa7.28□□□□□ -1.24
ERCC2-212ENST00000591309 KRTAP23-1A1A580 65 aa7.16□□□□□ -1.26
ERCC2-212ENST00000591309 ROMO1P60602 79 aa7.16□□□□□ -1.26
ERCC2-212ENST00000591309 DSTQ03001 7570 aaKnown RBP7.16□□□□□ -1.26
ERCC2-212ENST00000591309 KRTAP4-3Q9BYR4 195 aa7.06□□□□□ -1.28
ERCC2-212ENST00000591309 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
ERCC2-212ENST00000591309 KRTAP19-4Q3LI73 84 aa6.96□□□□□ -1.3
ERCC2-212ENST00000591309 KRTAP4-9Q9BYQ8 210 aa6.94□□□□□ -1.3
ERCC2-212ENST00000591309 KRTAP15-1Q3LI76 137 aa6.93□□□□□ -1.3
ERCC2-212ENST00000591309 LCE4AQ5TA78 99 aa6.92□□□□□ -1.3
ERCC2-212ENST00000591309 MT4P47944 62 aa6.81□□□□□ -1.32
ERCC2-212ENST00000591309 LCE1DQ5T752 114 aa6.81□□□□□ -1.32
ERCC2-212ENST00000591309 BRK1Q8WUW1 75 aa6.79□□□□□ -1.32
ERCC2-212ENST00000591309 LCE3CQ5T5A8 94 aa6.75□□□□□ -1.33
ERCC2-212ENST00000591309 KRTAP5-4Q6L8H1 288 aa6.75□□□□□ -1.33
ERCC2-212ENST00000591309 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
ERCC2-212ENST00000591309 KRTAP5-5Q701N2 237 aaPredicted RBP6.59□□□□□ -1.35
ERCC2-212ENST00000591309 KRTAP4-6Q9BYQ5 205 aa6.58□□□□□ -1.36
ERCC2-212ENST00000591309 HMCN1Q96RW7 5635 aa6.56□□□□□ -1.36
ERCC2-212ENST00000591309 KRTAP12-4P60329 112 aa6.5□□□□□ -1.37
ERCC2-212ENST00000591309 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
ERCC2-212ENST00000591309 PMAIP1Q13794 54 aa6.4□□□□□ -1.38
ERCC2-212ENST00000591309 KRTAP20-2Q3LI61 65 aa6.39□□□□□ -1.39
ERCC2-212ENST00000591309 GPR98Q8WXG9 6306 aa6.36□□□□□ -1.39
ERCC2-212ENST00000591309 SYNE1Q8NF91 8797 aaKnown RBP6.33□□□□□ -1.4
ERCC2-212ENST00000591309 MT1AP04731 61 aa6.29□□□□□ -1.4
ERCC2-212ENST00000591309 SVIPQ8NHG7 77 aa6.28□□□□□ -1.4
ERCC2-212ENST00000591309 KRTAP9-6A8MVA2 160 aa6.27□□□□□ -1.41
ERCC2-212ENST00000591309 AHNAK2Q8IVF2 5795 aa6.23□□□□□ -1.41
ERCC2-212ENST00000591309 KRTAP6-1Q3LI64 71 aa6.21□□□□□ -1.42
ERCC2-212ENST00000591309 KRTAP5-10Q6L8G5 202 aa6.16□□□□□ -1.42
ERCC2-212ENST00000591309 KRTAP5-3Q6L8H2 238 aa6.16□□□□□ -1.42
ERCC2-212ENST00000591309 PRO0628Q9UI54 55 aa6.07□□□□□ -1.44
ERCC2-212ENST00000591309 PRAC1Q96KF2 57 aa6.05□□□□□ -1.44
ERCC2-212ENST00000591309 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
ERCC2-212ENST00000591309 KRTAP5-2Q701N4 177 aa5.95□□□□□ -1.46
ERCC2-212ENST00000591309 KRTAP6-2Q3LI66 62 aa5.9□□□□□ -1.46
ERCC2-212ENST00000591309 KRTAP5-7Q6L8G8 165 aa5.9□□□□□ -1.46
ERCC2-212ENST00000591309 MT3P25713 68 aa5.79□□□□□ -1.48
ERCC2-212ENST00000591309 KRTAP4-11Q9BYQ6 195 aa5.78□□□□□ -1.48
ERCC2-212ENST00000591309 KTN1-AS1Q86SY8 53 aa5.77□□□□□ -1.49
ERCC2-212ENST00000591309 KRTAP5-8O75690 187 aa5.55□□□□□ -1.52
ERCC2-212ENST00000591309 OBSCNQ5VST9 7968 aa5.45□□□□□ -1.54
ERCC2-212ENST00000591309 KRTAP9-9Q9BYP9 154 aa5.31□□□□□ -1.56
ERCC2-212ENST00000591309 KRTAP5-1Q6L8H4 278 aa5.29□□□□□ -1.56
ERCC2-212ENST00000591309 LUZP6Q538Z0 58 aa5.21□□□□□ -1.58
ERCC2-212ENST00000591309 LCE1EQ5T753 118 aa5.2□□□□□ -1.58
ERCC2-212ENST00000591309 MUC5ACP98088 5654 aa5.1□□□□□ -1.59
ERCC2-212ENST00000591309 MUC5BQ9HC84 5762 aaPredicted RBP5.07□□□□□ -1.6
ERCC2-212ENST00000591309 AHNAKQ09666 5890 aaKnown RBP5.04□□□□□ -1.6
ERCC2-212ENST00000591309 LCE3DQ9BYE3 92 aa4.95□□□□□ -1.62
ERCC2-212ENST00000591309 LCE1BQ5T7P3 118 aa4.94□□□□□ -1.62
ERCC2-212ENST00000591309 KRTAP4-2Q9BYR5 136 aa4.85□□□□□ -1.63
ERCC2-212ENST00000591309 LCE1CQ5T751 118 aa4.82□□□□□ -1.64
ERCC2-212ENST00000591309 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
ERCC2-212ENST00000591309 H3BS24 57 aa4.4□□□□□ -1.71
ERCC2-212ENST00000591309 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.39□□□□□ -1.71
ERCC2-212ENST00000591309 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
ERCC2-212ENST00000591309 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
ERCC2-212ENST00000591309 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
ERCC2-212ENST00000591309 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
ERCC2-212ENST00000591309 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
ERCC2-212ENST00000591309 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
ERCC2-212ENST00000591309 PHGR1C9JFL3 82 aa3.73□□□□□ -1.81
ERCC2-212ENST00000591309 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
ERCC2-212ENST00000591309 PRM1P04553 51 aa3.66□□□□□ -1.82
ERCC2-212ENST00000591309 INE1O15225 51 aa3.53□□□□□ -1.84
ERCC2-212ENST00000591309 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
ERCC2-212ENST00000591309 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
ERCC2-212ENST00000591309 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 102.5 ms