RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 KRTAP25-1Q3LHN0 102 aa6.69□□□□□ -1.34
VAT1-208ENST00000590924 MT1EP04732 61 aa6.67□□□□□ -1.34
VAT1-208ENST00000590924 KRTAP19-3Q7Z4W3 81 aa6.66□□□□□ -1.34
VAT1-208ENST00000590924 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
VAT1-208ENST00000590924 GPR98Q8WXG9 6306 aa6.57□□□□□ -1.36
VAT1-208ENST00000590924 ROMO1P60602 79 aa6.56□□□□□ -1.36
VAT1-208ENST00000590924 KRTAP4-9Q9BYQ8 210 aa6.56□□□□□ -1.36
VAT1-208ENST00000590924 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
VAT1-208ENST00000590924 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
VAT1-208ENST00000590924 BRK1Q8WUW1 75 aa6.49□□□□□ -1.37
VAT1-208ENST00000590924 MT1GP13640 62 aa6.48□□□□□ -1.37
VAT1-208ENST00000590924 PP632Q6XCG6 107 aa6.43□□□□□ -1.38
VAT1-208ENST00000590924 LCE1DQ5T752 114 aa6.41□□□□□ -1.38
VAT1-208ENST00000590924 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
VAT1-208ENST00000590924 MT1MQ8N339 61 aa6.37□□□□□ -1.39
VAT1-208ENST00000590924 LCE4AQ5TA78 99 aa6.36□□□□□ -1.39
VAT1-208ENST00000590924 MT1LQ93083 61 aa6.34□□□□□ -1.39
VAT1-208ENST00000590924 MT4P47944 62 aa6.29□□□□□ -1.4
VAT1-208ENST00000590924 HMCN1Q96RW7 5635 aa6.24□□□□□ -1.41
VAT1-208ENST00000590924 KRTAP5-4Q6L8H1 288 aa6.22□□□□□ -1.41
VAT1-208ENST00000590924 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
VAT1-208ENST00000590924 KRTAP4-3Q9BYR4 195 aa6.2□□□□□ -1.42
VAT1-208ENST00000590924 PMAIP1Q13794 54 aa6.16□□□□□ -1.42
VAT1-208ENST00000590924 KRTAP15-1Q3LI76 137 aa6.14□□□□□ -1.43
VAT1-208ENST00000590924 AHNAK2Q8IVF2 5795 aa6.14□□□□□ -1.43
VAT1-208ENST00000590924 KRTAP4-6Q9BYQ5 205 aa6.1□□□□□ -1.43
VAT1-208ENST00000590924 PRO0628Q9UI54 55 aa6.09□□□□□ -1.43
VAT1-208ENST00000590924 KRTAP5-10Q6L8G5 202 aa6.07□□□□□ -1.44
VAT1-208ENST00000590924 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
VAT1-208ENST00000590924 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
VAT1-208ENST00000590924 KRTAP5-3Q6L8H2 238 aa5.88□□□□□ -1.47
VAT1-208ENST00000590924 KRTAP5-7Q6L8G8 165 aa5.87□□□□□ -1.47
VAT1-208ENST00000590924 KRTAP5-5Q701N2 237 aaPredicted RBP5.87□□□□□ -1.47
VAT1-208ENST00000590924 KRTAP20-2Q3LI61 65 aa5.86□□□□□ -1.47
VAT1-208ENST00000590924 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
VAT1-208ENST00000590924 KRTAP12-4P60329 112 aa5.76□□□□□ -1.49
VAT1-208ENST00000590924 PRAC1Q96KF2 57 aa5.75□□□□□ -1.49
VAT1-208ENST00000590924 KTN1-AS1Q86SY8 53 aa5.71□□□□□ -1.5
VAT1-208ENST00000590924 SYNE1Q8NF91 8797 aaKnown RBP5.7□□□□□ -1.5
VAT1-208ENST00000590924 LOC100996750A0A140TA64 210 aa5.69□□□□□ -1.5
VAT1-208ENST00000590924 KRTAP9-6A8MVA2 160 aa5.55□□□□□ -1.52
VAT1-208ENST00000590924 KRTAP5-2Q701N4 177 aa5.42□□□□□ -1.54
VAT1-208ENST00000590924 MT1AP04731 61 aa5.41□□□□□ -1.54
VAT1-208ENST00000590924 KRTAP4-11Q9BYQ6 195 aa5.41□□□□□ -1.54
VAT1-208ENST00000590924 KRTAP6-1Q3LI64 71 aa5.36□□□□□ -1.55
VAT1-208ENST00000590924 SVIPQ8NHG7 77 aa5.35□□□□□ -1.55
VAT1-208ENST00000590924 KRTAP5-8O75690 187 aa5.24□□□□□ -1.57
VAT1-208ENST00000590924 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
VAT1-208ENST00000590924 OBSCNQ5VST9 7968 aa5.17□□□□□ -1.58
VAT1-208ENST00000590924 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
VAT1-208ENST00000590924 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
VAT1-208ENST00000590924 AHNAKQ09666 5890 aaKnown RBP5.04□□□□□ -1.6
VAT1-208ENST00000590924 MUC5BQ9HC84 5762 aaPredicted RBP5.01□□□□□ -1.61
VAT1-208ENST00000590924 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
VAT1-208ENST00000590924 MT3P25713 68 aa4.95□□□□□ -1.62
VAT1-208ENST00000590924 LUZP6Q538Z0 58 aa4.88□□□□□ -1.63
VAT1-208ENST00000590924 KRTAP5-1Q6L8H4 278 aa4.88□□□□□ -1.63
VAT1-208ENST00000590924 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
VAT1-208ENST00000590924 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
VAT1-208ENST00000590924 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
VAT1-208ENST00000590924 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
VAT1-208ENST00000590924 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
VAT1-208ENST00000590924 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
VAT1-208ENST00000590924 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
VAT1-208ENST00000590924 KRTAP4-12Q9BQ66 201 aa4□□□□□ -1.77
VAT1-208ENST00000590924 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
VAT1-208ENST00000590924 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
VAT1-208ENST00000590924 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
VAT1-208ENST00000590924 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
VAT1-208ENST00000590924 INE1O15225 51 aa3.6□□□□□ -1.83
VAT1-208ENST00000590924 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
VAT1-208ENST00000590924 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
VAT1-208ENST00000590924 PRM1P04553 51 aa3.34□□□□□ -1.87
VAT1-208ENST00000590924 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
VAT1-208ENST00000590924 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
VAT1-208ENST00000590924 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
VAT1-208ENST00000590924 H3BS24 57 aa2.67□□□□□ -1.98
VAT1-208ENST00000590924 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 93.3 ms